Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                         --------->YAB5                                                      --------->DOF5.7(1)                                             --------->DOF5.7(1)                ----------->RAV1(1)          --------->ANAC58             ----------->RAV1(1)             --------->ANAC58                  ---------->DOF2          --------->HSFB2a(2)               --------->DOF5.7(1)         <------ZmHOX2a(1)      <---------DAG2                       ---------->DOF2            <---------TOE1(3)      <----------DOF2------------------------>ANAC81---------->DOF2   <---------TOE2(3)           --- ------->ZAT18 --------->MYB46(3)       --------->ANAC58          --------->WOX13(2)              <-- --------ZAT18 --------->REM1(1)        --------->ANAC58          <---------WOX13(2)     --------->ATHB12   gtctactactttctgcaacaacaaaacaaaaaaactaaaaccaagaaaagccccaaaagattaccacaaattaaggaaacttaaagcccattgatttcaa  63400                                                                                    <----------DOF2                                                                                    <---------------AGL15                                                                                    --------------->AGL15                                                                                   <-----------------AGL2                                                                                   <-----------------AGL3                                                                              <---------AHL25(3)                                                                              --------->AHL12(1)                                                                              --------->AHL25(1)                                                                              <---------AHL12(1)                                                                              <---------ICU4                                                                              -------->ATHB1                                                                              --------->ATHB51                                                                              --------->AHL20(2)                                                                              <--------HAHB4                                                           <---------ARR11(2) <---------AHL25(1)                      <---------WOX13(1)                 --------->HSFB2a(1) --------->AHL25(3)                     --------->WOX13(2)                  --------->HSFC1(2)  <---------ATHB12             ----------->HVH21                           <---------HSFC1(2)  <---------ATHB51  <-----         --------->ZAT14                              --------->LBD16 --------->At4g35610      ------         --------->GLK1(1)     ---------->ID1       <---------LBD16  --------->ARR11(3)        ------         <---------ZAT14<-----------GT1             --------->At4g35610      --------->ICU4----------         <---------GLK1(1) --------->TOE2(3)    <-----------HVH21    <---------ARR11(3) ---------->DOF2      ------->GAMYB --------->YAB5         ------->TEIL  <---------HSFB2a(1)--------->WOX13(2) <----- ------>RVE1(2)    <---------YAB1  <---------ANAC58 <---------------------WRI1<---------AHL20(2)----- -------ARR11(3) <----------DOF2   <---------ANAC58 <---------At4g35610     <---------WOX13(2)<------   catctcaacagagctctgactttgattaaccttgttgtcttgttgaaccttgtcaccggagtttccaaggagagcttcaattatttctttaaaaggaata  63500                                                                                                   <-                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                                  <--                                                                                               ------                                                                                               <-----                                                                                             <-------                                                                                        ------>ZmHOX2a(2)                                                                                        =============                                                                                        <-------TEIL<                                                                                ----------->HVH21 ---                                                                                --------->ANAC46  <--                                                                             --------->TOE1(2)<------                                                                            --------->YAB1  ---------                                                                     ------>MYB46(1)   <------ZmHOX2a(2)                                                                     ------>MYB83 <---------LBD16----     <----------DOF2                                                 --------->ANAC58  ==============    <---------DOF5.7(1)   <---------ANAC58                           --------->ANAC46 --------->ARR11(2) ----KAN4(1)           <----------DOF2                               --------->ANAC58 <---------GATA12 --->KAN4(1)          <---------DOF5.7(1)                          --------->DEAR3(1) --------->RVE1(2) --->KAN1        <----------DOF2                     <----------DOF2--------->ABI4(1) <---------ARR11(2) ->GT1  <------------------------ANAC81       <---------ANAC58     <---------ALFIN1   <---------ARR14(2) ----KAN1 <---------DOF5.7(1)                 <---------ANAC58     --------->AtMYB61  --------->ARR14(2) ---->KAN4(2)   <---------DOF5.7(1)    <----------DOF2            --------->MYB46(3)  --------->GATA12 ---KAN4(2)<----------DOF2<---------ANAC58    <---------ANAC46   ------>NtERF2 --------->SPL7(1)<----   atctcttctttctctttctctttctctttcttgttcttgttctttcttccgtctactttccatttgccaccaccccattcatacgacggatccatccacg  63600        <---------ALFIN1     ------->GAMYB    <---------ALFIN1  ----------->RAV1(1) --------ATERF1(1) --------RAP2.3(1)                                                       ============================ ------->RAP2.6(2)                                                       <----------DOF2 ---->NtERF2                                                            <---------DOF5.7(1) -------DEAR3(1)                                                      ------>ZmHOX2a(2) --->ANAC46                                                         --------->GATA12 ----DEAR3(1)               --------->LBD16                         <---------GATA12 --ALFIN1                 <---------LBD16                        <-------TEIL                <------- ==================HOX2a_HOX2a                <---------ANAC58  --------->ARR14(1)           <------- ------NtERF2        --------->O2             <---------ANAC58 --------->ARR14(2)        ------>ZmHOX2a(2) ------>ATERF1(2)  <---------ALFIN1 <------NtERF2              <---------ARR14(2)      --------->GATA12 -------ATERF1(2)------>NtERF2     ------>NtERF2               --------->GATA12        <---------GATA12 ---LBD16    --------->ANAC46 <---------ARR11(2)               <---------GATA12<---------MYB52(1) >MYB46(3)  ------>ZmHOX2a(1) --------->SPL7(1)                <---------GLK1(2)  <---------RVE1(2)-- ----->RAP2.6(3)--------->DEAR3(1)--------->DEAR3(1)           --------->ARR11(1)--------->KAN1   <-- ==================HOX2a_HOX2a--------->ARR11(2)              --------->KAN1  <-------GAMYB  -------- -----ATERF1(1) --------->ANAC46 --------->DEAR3(2)          ----------->ARR10=======================   gcggcaacaccctcctcgcagccacttctccggatgccgacgctgtttccttgtctgaaaccctagattcgatctctttcggttgattcgatctcgcgta  63700            <---------TGA1a           <-----------------------TaNAC69(2)   --------->GLK1(2)                                                           <---------ZAT14  --------->GATA12                                                             --------->ZAT14  <---------GLK1(2)                                      <---------GATA12<---------ARR11(3)  <---------GATA12                                       <---------ARR14(2)    <---------REM1(2)  <---------RVE1(2)                                      <---------ARR11(2)--------->YAB5  <---------ARR14(2)                                ----------->GT1      --------->ARR11(3)  --------->ARR14(2)                         <---------HSFB2a(2)         --------->GLK1(2)    <xxxxxx =====================bZIP_DOF               --------->HSFB2a(2)         --------->RVE1(2)--------->GATA12 --ANAC55(2)<---------O2                     <---------ANAC46   --------->MYB46(3)        <---------ARR14(2) --ANAC46 <---------ZAT14  --------->YAB5   <---------LBD16     <---------ATHB12          ------->TEIL ------->YAB1 --------->ALFIN1     --------->GLK1(2)--------->At4g35610 <---------GLK1(2) <---------GATA12 -------YAB5<---------bZIP60(2)   <---------GLK1(2)--------->ALFIN1--------->ANAC58       --------->ARR14(2) ->ANAC55(2)<---------ANAC46     --------->YAB5   <------ZmHOX2a(1)--------->ANAC58       --------->GLK1(2) =====================MYC_MYB   <---------YAB1--------->LBD16 --------->WOX13(1)<---------ALFIN1-----   atcagattctggtgaagtgggaacagaaaccattacgattctttcttccggaggaggtgaatcccaatcacccaaaatctctacactctctgaatctgaa  63800                                                     <---------ANAC58                         <------                                                     --------->ANAC55(2)                     --------                                                     <---------ANAC58   --------->YAB5--------->ANAC46  <-----------GT1                                <----------DOF2<---------RVE1(2)     --------->ANAC58 xxxxxxxxxxsmallRNA(si3)                <----------DOF2        --------->ATHB12       --------->ANAC58 -->TEIL --------->TOE2(3)              <---------DAG2    <---------MYB46(3)       ------->GAMYB   --   cgtttctccattcttaaaaactttggaatgcgaaatttgcgactttatgggctttacgggctgtttgatttgaaagattagacaactcacacaacttatt  63900                --------->At4g35610           <------MYB46(1)           <------MYB83      <---------TOE2(3)      <---------TOE1(3)     <---------DOF5.7(2)     <-----------GT1                                 <---------YAB5     --------->MYB52(1)         ------>ZmHOX2a(1)    <---------YAB1   <---------MYB52(2)       <---------ALFIN1         ------------>CBF                          <-----  <---------WOX13(2)       ------>MYB46(1)       <-----------TGA1                              <-----  --------->WOX13(2)     --------->AtMYB61       <-----------HVH21<---------ZAT14  <---------DAG2 --------->WOX13(1)      --------->MYB46(3)     --------->ANAC46--------------->AtSPL3         <----- ------CBF<---------AtMYB61------>MYB83    --------->AtMYB61    --------------->AtSPL8        <------ ->ATHB12<---------MYB52(1)-------->P     --------->MYB46(3) ----------->HVH21     <----------DOF2 ---------->CBF <---------At4g35610     <-----------GT1    --------->ALFIN1   <---------AHL25(3)   gggcaattaacgttggtctgctcaacaccaactcctcactagaaaccactccgtcatcaatgtgtgactgtacatcaaaataaaactttttttttttggt  64000                                               -------->ATHB1                                               --------->YAB1                                              <---------ATHB12          ------>ZmHOX2a(2)                   <---------YAB1         <------ZmHOX2a(2)             <---------AHL25(3)        <---------GATA12               --------->AHL12(1)        --------->RVE1(2)              <--------ATHB1        --------->AGP1                 --------->YAB5        --------->ARR11(3)             --------->YAB1        <---------ARR11(3)             <---------AHL12(1)        <---------ARR11(2)             -------->HAHB4        <---------ARR14(2)             <---------ICU4        <---------AGP1--------->YAB1  <---------ATHB51       <---------CCA1(2)              --------->ICU4 --GAMYB--------->GATA12             --------->AHL12(2)                                <-----------GT1 ----ANAC58          <---------TOE2(3)<---------YAB5                     <-----------RAV1(1) ----ANAC58      <---------At4g35610--------->YAB1            <------------CBF    <------------CBF ---MYB46(3)    ------->TEIL     <----------DOF2<------------CBF----------->GT1 <---------YAB5      -   tgcaaacgtagatctatgtagctaagataacctctctttaataattctatcattgtgttttccaaattgttatatatgttgtgtcattgtaacgcgttgc  64100                                             <---------ZAT2    <----------ID1                           <---------At4g35610     <---------WOX13(1) --------->DAG2                  --------->ANAC46                   <---------WOX13(2) --------->DOF5.7(1)          --------->ZAT14--------->ZAT2         --------->WOX13(2)   <---------WOX13(1) --------->DOF2           <-----------GT1    --------->At4g35610 <---------MYB59    <----------DOF2   cataaagcgacaacatcgttgcaactttcaactatactcaaatagccagcttgcagagtattttttgcctaattgaattgtttgaactttgatttatagg  64200                                                          --------->TOE2(3)                                                        -------->P                                                        ------->TEIL                                                      ------>ZmHOX2a(2)                                                    --------->GATA12                                                    <---------GATA12                                                    ----------------------->TaNAC69(2)             --                  --------->YAB5            --------->TOE2(2)       <---------ALFIN1      <---------DOF5.7(1)               <------ZmHOX2a(1)          -------->P--------->ARR11(3)                   <----------DOF2             <---------TOE2(3)  <---------RVE1(2)   <---------ARR11(3)          >>>>>>>ZML2<---------         <---------KAN1    <-----------RAV1(1)  --------->YAB1     <---------ZAT18     ---------->ID1   tttcaaaccgagtttgaggatgatcacatatgtggctattgactaacctatggtgatctacctctatagaccacttctagttctagtttggctcttttgt  64300  Previous    Next  AGI:  At1g01130.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G47170.1); contains domain CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE-RELATED (PTHR22982); contains domain CBL-INTERACTING PROTEIN KINASE-RELATED (PTHR22982:SF45) Range:  from: 61963    to: 63811    Orientation: Reverse Links:  TAIR  MIPS  AIP    AGI:  At1g01140.1    Description:  CIPK9 (CBL-INTERACTING PROTEIN KINASE 9); kinase. similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.2); similar to CIPK23 (CBL-INTERACTING PROTEIN KINASE 23), kinase [Arabidopsis thaliana] (TAIR:AT1G30270.1); similar to CBL-interacting protein kinase 12 [Populus trichocarpa] (GB:ABJ91219.1); contains InterPro domain NAF; (InterPro:IPR004041); contains InterPro domain Serine/threonine protein kinase; (InterPro:IPR002290); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Serine/threon Range:  from: 64166    to: 67625    Orientation: Reverse Links:  TAIR  MIPS  AIP      Please cite the corresponding publications when using AthaMap.