Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        --------->AHL20(2)                                                                      <---------AHL20(2)                                                                     <---------AHL20(2)                                                                     --------->YAB1                                                                     --------->AHL20(2)                  <----------DOF2                                --------->AHL20(1)                  <---------------AGL15                          --------->AHL20(2)                  <---------DAG2                                <---------AHL20(2)                  --------------->AGL15                         --------->AHL20(2)                  =================================================MADS_MADS                 <-----------------AGL2                      --------->AHL20(2)                 <-----------------AGL1                      <---------AHL20(2)                ===================================================MADS_MADS                <-----------------AG                         --------->AHL20(1)                <-----------------AGL1                      <---------AHL20(2)                <-----------------AGL3                      --------->AHL20(2)            <---------MYB46(3)                          <---------AHL20(2)            ----------->GT1                             --------->AHL20(2)          <---------WOX13(1)           ------->TEIL     --------->AHL20(1)        --------->ATHB12          <---------ICU4       --------->AHL20(2)      --------->ARR11(3)       <---------YAB1          --------->YAB1          <---------AHL20(2)      <---------ARR11(3)       <---------AHL20(2)     --------->AHL20(2)   --------------->AGL15      <<<<<<<<<RAP2.2      --------->AHL20(2)      <---------AHL20(2)   <---------YAB1<---------AHL20(2)  <---------CCA1(2)      <---------AHL20(2)     --------->ICU4        ==================================================   ttgttgattttaattggttacttttttgggaattaataatgtattttgtttttctaattaaattaaattaattaaaatttagatatcaaatcttatatgt  20299000                                                                 --------->AHL20(1)                                                                 <---------AHL20(2)                                                                 --------->AHL20(2)                                                            --------->AHL20(1)                                                            <---------AHL20(1)                                                            <---------AHL20(2)                <---------YAB1                              --------->AHL20(2)               <---------AHL20(1)                      <---------AHL20(2)               <---------AHL20(2)                      --------->AHL20(1)              --------------->AGL15                    --------->AHL20(2)              <---------------AGL15                    <---------AHL20(1)             <---------YAB1                        --------->AHL20(1)             --------->ICU4                        <---------AHL20(1)        <------MYB46(1)                 <---------ANAC58--------->AHL20(2)        <---------MYB46(3)          ------->TEIL   <---------AHL20(2)        ----------->GT1        <---------ICU4      --------->AHL20(2)        <------MYB83        --------->YAB1        --------->AHL20(2)            <----------DOF2     -      <---------WOX13(1)   <---------AHL20(2)     <---------AHL20(2)            <---------DAG2  -----    --------->ATHB12       --------->AHL20(2) --------->AHL20(2)<---------AHL20(2)        ------>ZmHOX2a(1)   <---------YAB1         --------->AHL20(2)  <---------AHL20(2)--------->AHL20(2)       --------->TOE2(3) =============================MADS_MADS <---------ANAC58<---------AHL20(2)   <-----------GT1---------   tgattttgattggttattatttttggaaattaataatgtatttcgtttttaattaaatttaattaattaaattagtatttgactttttaatcctcaaaga  20299100                                                                                          <xxxxxxxxxx                                                                                       <xxxxxxxxxxxxx                                                                                      <xxxxxxxxxxxxxx                                                               <---------AHL20(2)   xxxxxxxxxxxxxxxxx                                                  <---------AHL20(2)       --------->AHL20(2)              <----------DOF2                 <---------AHL20(2) <---------TOE2(3)  xxxxxxxxxxxxxxxxx     --------->AHL20(2)                  xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxxxxxxxxxx     <---------AHL20(2)                  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxx    <---------AHL20(1)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxx    --------->AHL20(1)       <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<---------TOE1(3)  <xxxxxxxxxxxxxxxx    --------->AHL20(2) --------->AHL20(2)xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<---------AHL20(2) -------    <---------AHL20(2) <---------AHL20(1)--------->TOE2(2)     --------->AHL20(2)  ------->TEIL   <---------AHL20(2)  --------->AHL20(1)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --------------->AtSPL8   --------->AHL20(2)  <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  <---------------AtSPL3 -------->AHL20(2)    --------->AHL20(2)<xxxxxxxxxxxxxxxxsmallRNA(s)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2) ------>GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->AHL20(2)   <---------YAB1 <xxxxxxxxxxxxxx ->DOF2  <-----------GT1    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)---------->DOF2<---------------AtSPL8   gataaattaatttactctttaaaattttatttctaatgacatacctatgtaattacttacaaaaattaaagttatatttaaaatgtacttcccaaataat  20299200         ------->TEIL    <------ZmHOX2a(1) xxxxxxxxxxsmallRNA(le3) xxxxxxxxxsmallRNA(si3) xxxxxxxxsmallRNA(se3)                     --------->AHL20(2) xxxxx>smallRNA(si3)                      --------->YAB1 xxxxxx>smallRNA(fl3)                --------->AHL20(2) x>smallRNA(se3)                     <---------AHL20(2)                                      <------- xsmallRNA(se3)                    --------->CCA1(2)                                         -------- x>smallRNA(si3)                  <---------ARR11(3)                             <---------ANAC58 xxxxxxsmallRNA(i2)               --------->ARR11(3)                             <---------ANAC46 -->AHL20(2)              <---------AHL20(2) --------->YAB1                      <---------ANAC58 <-- xxxxxsmallRNA(si3)       --------->AHL20(2)<---------YAB1             --------->AtLEC2--------->ANAC46   atagtaggatgaatctaataacccaaaatttataaagatttaaattataatcaacagtttgatcatcttgttcatacaaaatttcgtataagacattaat  20299300                                                      --------->AHL20(1)                                                      <---------AHL20(1)                                                      --------->AHL20(2)                                                      <---------AHL20(2)                                                   <---------ICU4                                                   --------->ATHB51                                                   <---------AHL20(2)                           <----                                                   <--------ATHB1                          *TSS------   --------->ANAC58                                --------->AHL20(2)                    --------->ANAC46   --------->ANAC58                               --------->ICU4                         --------->ANAC58 ---------->DOF2                                --------->YAB1                           --------->ANAC58 --AHL20(2)                                 <------ZmHOX2a(1)      ---------->DOF2     <---------ALFIN1 ->AHL20(2)         --------->YAB1        <---------TOE2(3)   ----------->GT1   <---------GLK1(2)   < ---------GT1--------->YAB1             ---------->DOF2<---------AHL20(2)<----------DOF2<---------LBD16   taacaaagcaaaaaatcatatatcaaaatagacacatattaacaaaggattaataatttaatagttgtgaaaagcctttccagtttcttccacggcctag  20299400                                              <------NtERF2                                              --------->ATERF1(1)                                             ------>NtERF2                                             <---------ATERF1(1)                 <-----------GT1                                             <---------RAP2.3(1)            --------->AHL20(2)                                            <---------ANAC58                <---------AHL20(2)                                            <---------PCF2                  <---------AHL20(1)                                            <---------ANAC46                <--------ATHB1                                            <---------RAP2.3(2)             --------->YAB1                                            <---------ANAC58                <---------ICU4         --         <-----------GT1                   --------->ATERF1(1)             <---------ATHB12    ------       <----------DOF2                     --------->RAP2.3(1)             <---------ATHB51   ------- ------>ZmHOX2a(1)                       --------->ALFIN1                  --------->ICU4    <------- -----ZAT2                            --------->DAG2                    ------>ZmHOX2a(1)    -------- ----->ARR10                         ---------->DOF2                --------->ARR14(2)       <------- ---------ALFIN1             <---------HSFB2a(2)                    <---------ARR14(2)    <----------DOF2   ctcctccgtctttacgctctctcatcaaactcgagaaaaaaaagtggcgcctctgcaatttcaattttcaaatcctaataatttttctctcgcttcccgg  20299500                                                                              --------->ANAC58                                                                            ---------->DOF2                                                                         <------NtERF2                                                                        --------->LBD16             <                                               --------->ZAT2          --------->DEAR3(1)       -----                                               --------->At4g35610     <---------ANAC46      --------       --------->TOE2(3)                       <---------At4g35610    <------NtERF2         <--------    --------->ARR14(2)                         ------>NtERF2          <---------LBD16       ---------    <---------ARR14(2)                        --------->DEAR3(1)      --------->ATERF1(1)   --------- --------->ANAC58                            --------->ERF1          ------>NtERF2          <-------- --------->ANAC58                           --------->LBD16         --------->ANAC46       --------->DEAR3(2) ------->MYB52(1)                           --------->At4g35610     --------->DEAR3(1)    --------->MYB52(1) --->LBD16                  --------->ICU4  <---------At4g35610     <---------DEAR3(1)    ------>NtERF2 -->LBD16                   <---------YAB1 --------->ANAC46       <---------ATERF1(1)    --------->ANAC46 --LBD16            --------->ANAC46      <---------LBD16        ----------->HVH21       <---------ALFIN1 ->HSFB2a(2)    --------->HSFB2a(2)    <---------GLK1(1)      <-----------HVH21         --------->MYB46(3) --HSFB2a(2)    <---------HSFB2a(2)    --------->GLK1(1)   <-----------RAV1(2)--------->ANAC58-------   agaacggaaccctaatttctcgacgcagacatgattttgagaactccgcagccgaagaggctcaggtccgacgccggagaaagccccttccccaccggcg  20299600        --------->LBD16       --------->ATERF1(2)       <---------LBD16            --------->GLK1(2)       <---------HSFB2a(2)       --------->ARR14(2)       --------->HSFB2a(2)       --------->ARR11(3)       <---------ETT(1)          <---------GLK1(2)                                    <------NtERF2      <---------LBD16            <---------ARR14(2)                                <---------LBD16    --------->ARR14(2)           <---------ARR11(3)       --------->At4g35610      <---------At4g35610    <---------ARR14(2)          <---------HSFC1(2)        <---------At4g35610    <---------DEAR3(1) -----------------AGL1          --------->HSFC1(2)        --------->LBD16     --------->KAN4(2) ->NtERF2                       <---------HSFB2a(1)  <---------ZAT2         <---------YAB1 ->LBD16------>NtERF2 --------->YAB1                 --------->ZAT2        <---------ARR11(3)<------- -DEAR3(1)           <---------ATHB12          <---------At4g35610         --------->ARR11(3)-------- >ATERF1(2)     <---------At4g35610           ------>ZmHOX2a(1)           --------->YAB1<------ZmHOX2a(2) >DEAR3(1)      --------->At4g35610     ------>ZmHOX2a(1)--------->ANAC46<---------YAB1<---------ARR14(2) -ATERF1(2)--------->WOX13(1)   --------->HSFB2a(1) ------>ZmHOX2a(1)    --------->ICU4--------->ARR14(2) -->RAP2.3(1)<---------ATHB12  ----------->ARR10  ----------->RAV1(2)  --------->YAB1<---------MYB46(3)   ctactggttccggcaatcagctaatcatctacgaagattctcctcttcctgctcctgctccgctacaaacttctcatgatcattcggcggatcaacatct  20299700               <------NtERF2              ------>NtERF2              <---------RAP2.6(3)              --------->LBD16             --------->RAP2.3(3)             --------->RAP2.3(2)                                           <---------TOE2(3)             --------->ATERF1(2)                                      <---------ARR14(2)             --------->DEAR3(1)                                       <---------ARR11(1)      <---------YAB1                                                  ------->TEIL      <---------ATHB12                          <---------ARR14(2)    --------->GLK1(2)          <---     ------>MYB83                               --------->ARR14(2)    --------->ARR14(2)         <---     ------>MYB46(1)                           <---------CCA1(2)      <-----------ARR10          ---- ------->TEIL--------->RAP2.6(2)      ------>MYB83                   <---------ARR14(1)         ----- --ARR11(3)  <---------ATERF1(2)      ------>MYB46(1)       ----------->ARR10   <---------MYB46(3) ->ARR11(3) --------->RAP2.3(1)     <---------MYB59   ----------->HVH21    <---------TOE1(3)  <------   ttgcacctatcaatgccgccaaatggtcactacttatacctatctatctatatcccctcacgaagattagcgaatctgaggtttgttcttgttgttgtta  20299800                               --------->ZAT2                               --------->ZAT14                               <---------ZAT2                               --------->At4g35610                               <---------ZAT14    <---------At4g35610        <---------At4g35610 ---------->DOF2     <---------ANAC58 ---MYB46(1)         <---------ANAC58                         ------>MYB83                       ---- ---MYB83     >>>>>>>ZML2 <---------At4g35610                 ------>MYB46(1)                    ---- ------->GT1  --------->HSFB2a(2)                  --------->GLK1(2)                             <--- ---->MYB59   <---------HSFC1(1)                 <------ZmHOX2a(1)    <---------GLK1(2)        <----- ---MYB52(1)  <---------HSFB2a(2)              <---------TOE2(3) <-----------GT1          --------->DEAR3(1)   ggttaaagctgatgttctagatgccttgagcacagcagagaaacaagttgaggaatctaaaaccaaattacagactcttaatgccaacttcaccgaagca  20299900  Previous    Next  AGI:  At5g49880.1    Description:  mitotic checkpoint family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO46913.1); contains InterPro domain Mitotic checkpoint (InterPro:IPR008672) Range:  from: 20299391    to: 20305310    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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