Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100              <---------MYB46(3)          <---------MYB52(1)  --------->ARR14(2)                                                                       XXXXXXXXXX  <---------TCP20                                                                         ------->TEIL  <---------ARR14(2)                                    ----------->HVH21                --------->ARR14(2) ---------HSFC1(2)                                    --------->ANAC46                   ------>MYB46(1) -------->HSFB2a(1)                                 --------->AtMYB61                  <---------MYB59 -------->HSFC1(2)                                  <---------ALFIN1         --------->CCA1(2) ---------HSFB2a(1)                          --------->LBD16          <-----------RAV1(2)------>MYB83 ---------MYB46(3)   --------->ANAC58      <---------LBD16     --------->At4g35610    --------------- ---------DEAR3(2)   --------->ANAC58     --------->MYB52(1)   <---------At4g35610 ---------->DOF2 --------DEAR3(1)    --------->ANAC46    <---------ALFIN1--------->MYB52(1) --------->ARR14(2)    --- -------->AtMYB77 ------>ZmHOX2a(1)     --------->MYB46(3) --------->ANAC46 <---------ARR14(2) <-----   gacggttccacagtttgttcctcaagcaatctctgaaacacatccaccggagcaccactcgacggagcagaaacaggggatacgataaaccgaacctctt  14778800                              --------->ARR11(3)                              <---------ARR11(3)                            --------->DAG2                  <---------MYB52(1)                 <-----------TGA1                                                          <---------ATHB12                 <-----------HVH21                      --------->ANAC58              --------->At4g35610                --------->DEAR3(1)                      --------->ANAC58     <---------GLK1(2) XXXXXXXXXXX>MIR771  <---------YAB1                     --------->ANAC46     --------->ARR11(3) >AtSPL8        --------->ANAC46                   <---------ICU4            <---------ARR11(3)<----- ------>YAB1  <---------At5g28300<----------DOF2  --------->ICU4            <---------RVE1(1) ------- -----DOF2<----------DOF2 ---------->DOF2    ----------->GT1               ----------->ARR10 <-------   tgatgactctcactttcaccgtcatgagaaaaggtctttgatagagagtgtaattagcacgcgaaaatcgaagagaagagattttctcagccaaagattc  14778900                                                                     <---------ANAC58                                                                <---------ANAC55(2)                                                                --------->ANAC55(2)                                                                <---------ANAC58                                                                <---------ANAC46                                                                --------->O2                                                                <---------O2                                                                <---------ANAC58                                                                <---------bZIP60(2)                                                            <---------HSFC1(2)                                                            <---------At4g35610                                                            <---------HSFB2a(1)                                                            --------->HSFC1(2)                                                            --------->At4g35610                                                            <---------ZAT2                                                           --------->ANAC58                                                           --------->ANAC58                                                         <------ZmHOX2a(1)                                                        <------MYB46(1)                                                        <------MYB83 <---------ANAC58                                                      ====================MYC_MYB                                     <---------O2     <--------P<---------TGA1a                <-----                                     ==========================MYC_MYB                        ------>NtERF2                         <----------ID1            --------->HSFB2a(2)                        -------                       <---------DOF5.7(2)  --------->At4g35610 --------->TGA1a  --------->TOE1(2) --TEIL               --------->WRKY12      <---------At4g35610<-------TEIL<------ZmHOX2a(1) <------- -->CCA1(2)    --------->At5g28300   <---------TGA1a <---------MYB52(1)   --------->LBD16    -------- --GLK1(2)  <---------At5g28300  <------ZmHOX2a(1) <---------HSFB2a(2)  <-----------RAV1(2)  --------   acaaatagaagtatcacggtgaagttgacgacgaaggagacgggagagctgttctggtaggaagctacgtggcttcaggagaacatgagagattggcgac  14779000       --------->MYB46(3)      ------>NtERF2                                                                           <------  --------->bZIP60(1)                                                                        --------  <---------bZIP60(1) --------->HSFB2a(2)                                                   <-------- -NtERF2<---------ALFIN1                                                                    --------- ---->RAV1(1)         <---------HSFB2a(2)                                                   --------- --ETT(2)      <-------GAMYB --------->ARR11(3)        <---------ANAC58                     <-------- ->ETT(2)<---------LBD16     <---------ARR11(3)        <---------ANAC46              ------->TEIL <-- --->HVH21    --------->ALFIN1                         <---------ANAC58    <---------ZAT14-----------   agtgatgccaccacgggtgttgttccagtaacatcttcgagcatctcatggattacttcgtgtagttcgatttggacagcacttgtgaaccctagattcg  14779100   <---------ZAT2   --------->At4g35610   <---------At4g35610   <---------HSFB2a(1)   <---------HSFC1(2)   --------->HSFC1(2) <--------P -TEIL                                                                                            <-- ->ARR14(1)                                                                                 --------- -GLK1(2)                                                            <---------KAN4(2)      <-------- >ARR14(2)                                                          --------->YAB1         <---------TOE1(2) >ARR11(1)                                                    >>>>>>>>>TBF1               <---------MYB52(1) -ARR14(2)      --------->TOE1(1)                     <---------ANAC46--------->ICU4    <---------ANAC58 -------TOE1(2) --------->TOE2(1)                <---------AtLEC2>>>>>>>>>TBF1  --------->TOE2(3) <-- >ARR10        ------>ZmHOX2a(1)   ---------->DOF2    <---------REM1(1)--------->YAB1   <---------ANAC58   aaggtagcttcgacatcctcgtagccacttgtagtctcaaagtttcggtttccatggtgtagaagaagaagaatgatcaaaaccctagtttcgttcgttt  14779200     ---------->DOF2        ---------->DOF2   --------->ANAC58    --------->AHL20(2)                                                        <---   --------->ANAC58    <---------AHL20(2)                                                        ----  XXXXXXXXXXXXXXXXXXX>MIR156G                                                              <---------YAB1 --------ID1     --------->ANAC58              ---------->DOF2                           <---------At4g35610 >MYB52(2)       --------->ANAC55(1)        <---------ANAC46                <------------CBF     <--- -MYB46(3)       --------->ANAC58       <------------CBF               <---------ZAT6    --------->At4g35610 -------ETT(1)   --------->ANAC46    <------ZmHOX2a(2)                 ----------->GT1 <-----------RAV1(2)   gcgacaagaaagagagaacacgaaattaaacaaagagagatcgattgtgtaaagagagaaacagagaatgagagtgtaaattgttatcttcagatgattc  14779300                                                           <------------CBF     <---------YAB1                                      <---------AHL20(2)    --------->AHL20(1)                              --------->DOF5.7(2)              --------->YAB1    <---------AHL20(2)          --------->GLK1(2)   <---------MYB52(1)               <---------ICU4    <---------AHL20(1)          --------->ARR14(2) --------->At5g28300              <---------ATHB12   --------->AHL20(2)          <---------GLK1(2)  ----------->GT1                   --------->ICU4 ------ANAC58               --------->ANAC46--------->YAB1--------->ATHB12    ----------->GT1 ----->TOE2(3)       <---------AHL20(2)     --------->TOE1(3)           <-----------GT1      <------- ------ANAC58       --------->AHL20(2)      --------->TOE2(3)      <----------DOF2--------->WOX13(1)   cttgattatatttacacagagatttaatatacagaatccaagttaatcttaaccgttaattcattgtttctttttttctgtagttaatcatggccgttta  14779400                                 <-----------HVH21                          --------->TOE2(3)                   <---------MYB46(3)                   ----------->GT1                                          --------->LBD16         <----------DOF2  --------->TOE1(3)                                <---------LBD16     <-----------GT1      --------->YAB1                                  <---------LBD16  <---------ICU4 <-------GAMYB  ------->GAMYB     <----------DOF2  --------->ATHB12             ----- <---------YAB1 <-----------RAV1(1)           <-----------GT1     <---------YAB1       ----------->GT1 --MYB52(1)  <-----------GT1   <------------AtMYB77              <---------GLK1(2) <-----------GT1 <-   ttgattatttccttttttctgttgttaatcttaactgtcaatggattgtttccttttttcttagttagattattgaaccgggatttaaccagtaaaatag  14779500                  ------>NtERF2                  --------->LBD16                <---------LBD16                                                               -------              --------->ARR14(2)                    --------->ANAC58                          <------              <---------ARR14(2)                    --------->ANAC58                          <------           <------MYB83                      --------->ANAC46              <---------DAG2    --------           <------MYB46(1)                  <---------LBD16          <<<<<<<<<TBF1           --------          --------->MYB59  ----------->RAV1(1)--------->LBD16 <---------ARR14(2)       ----------->GT1      <---------MYB46(3) --------->ZAT18   --------->MYB52(1) --------->ARR14(2)   <------------CBF   --------->MYB52(2)    <---------ZAT18   -------->P    ----------->GT1   <----------DOF2  <-------- ------->MYB.PH3(2)   <------------CBF    --------->MYB52(1)  <---------ARR11(3)------------>CBF    *TSS --------MYB46(3)<---------RAP2.6(2)    <---------MYB52(2)    --------->ARR11(3)----------------->AG<   tttgttagtggttcggtttccggctattgcaccagaatacaaactaaccggaacaagcagagtaaatcttcttcttcctttttccaattgagttattata  14779600 ---------->ID1 -->AHL20(1)                        <---------DOF5.7(2)                               <---------CCA1(2) ---AHL20(2)                      <---------MYB52(1)                              <-----------HVH21 ---AHL20(1)                      --------->DOF5.7(2)                            --------->bZIP60(1) ->YAB1                          <-------GAMYB                            <---------At4g35610 ->AHL20(2)                 --------->ZAT2                       <---------YAB1  ----------->GT1 -YAB1    <---------GLK1(2)--------->ANAC58                    --------->YAB1    <---------bZIP60(1) -----------GT1            --------->ANAC58          --------->ALFIN1     --------->At4g35610      <-   tttttcgcttcggcttctctctctctcacaagctccgttatcggaatcaaacacagtgggaagaatcaaaattgacagatgtgatgtcaaatctcttcaa  14779700  Previous    Next  AGI:  At5g37280.1    Description:  zinc finger (C3HC4-type RING finger) family protein. similar to zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] (TAIR:AT5G37200.1); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 14778505    to: 14779155    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g37290.1    Description:  armadillo/beta-catenin repeat family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO22199.1); contains InterPro domain Armadillo-type fold; (InterPro:IPR016024); contains InterPro domain Armadillo (InterPro:IPR000225); contains InterPro domain Armadillo-like helical; (InterPro:IPR011989) Range:  from: 14779600    to: 14781574    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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