Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                        --------->AHL20(1)                                      <---------AHL20(2)                             -------->HAHB4                             --------->YAB1                            --------->ICU4                            ----------->GT1                          <---------ICU4                                               --------->YAB1                         --------->ICU4                                             <----------DOF2                         <---------ATHB12                               --------->AHL20(2)          -             --------->TOE2(3)        --------->AHL20(2)  --------->CCA1(2)    --------->AHL20(2)   <            --------->YAB1--------->YAB1                 <---------ARR11(3)--------->AHL20(2)   -----           <---------YAB1<---------ATHB51            ---------->DOF2   --------->AHL20(2)      <-----           <---------TOE2(3)<---------YAB1--------->AHL20(2)  ----------->GT1  <---------AHL20(2)---- ----ZmHOX2a(1) ---------->DOF2      --------->AHL20(2)  --------->ARR11(3)<---------AHL20(2) -------   ggatgtttgtattaacataaaagaccaataatgataaaaaaaaattatacaaaaaaaaagatttaagtaaaaaataaaaaattaaactttgatgacaacc  8746800                                          <------NtERF2                                         <---------RAP2.6(3)                                        --------->RAP2.3(3)                                        --------->RAP2.3(2)                                        --------->RAP2.6(2)                                        --------->DEAR3(1)                                        --------->DREB2C(2)                                       --------->ATERF1(1)                                       --------->RRTF1(1)                                       --------->RAP2.3(1)                                      <---------ATERF1(1)                                      --------->ABI4(1)                                      ------>NtERF2                                     <---------DEAR3(1)                                     --------->DEAR3(1)                                     --------->RRTF1(3)                                     --------->RAP2.3(2)                                     --------->ANAC46                                     --------->RAP2.3(3)                                    --------->ORA47(2)                                    --------->DEAR4(2)                                    --------->RAP2.6(1)                                    --------->ATERF1(1)                                    --------->RRTF1(1)                                    --------->ERF1                                    <------NtERF2                                    --------->RAP2.3(1)                                   <---------RAP2.3(1)                                   <---------ATERF1(1)                                   ------>NtERF2                                  --------->DEAR3(1)                                  <---------DEAR3(1)                                 <------NtERF2                                 --------->ATERF1(1)                                <---------ATERF1(1)                                ------>NtERF2                                <-----------HVH21                          <----------DOF2------>NtERF2                         <---------ICU4--------->ERF1                       --------->ARR11(3)<-----------TGA1                --------->YAB1 -------->At4g35610    --------->GLK1(2)--------->RRTF1(3)              <------ZmHOX2a(2) ---------At4g35610    <-----------ARR10--------->RRTF1(2)              ============================= -->GAMYB              <---------ARR11(3)<-----------HVH21             <---------ARR11(3) ----LBD16            <---------GLK1(2)<------NtERF2       <---------ZAT14 <---------YAB1 ----->LBD16   --------->LBD16 <---------ATERF1(2)     --------->ZAT6 <---------At4g35610        ---- -->MYB52(1) <---------LBD16   --------->DEAR3(1)     <---------TOE2(3)--------->ARR11(3)<---------ARR11(3)   ggagctacaaacctctccggtgaagaatctttgccgtcgccgccgtcatcgaaattaagactatagtttttcagatcataagtgaaatcaacatctctcc  8746900                                                   <---------LBD16            --------->ZAT6                       --------->PCF5         --------->ANAC46              <-----------------AGL1                      <---------MYB52(1)         ------>ZmHOX2a(1)             <-----------GT1                       <-----------GT1       ----------->RAV1(2)            <-----------GT1--------->LBD16     <----------DOF2 ===HOX2a_HOX2a                ---------->DOF2   --------->PCF2    --------->GLK1(1) -->ZmHOX2a(1)             <---------YAB1   <----------DOF2        <---------GLK1(1)                -   tcatcttcttcctgccactactaaaacttcttataaagtttttccactttggtcccgcgattttctcagaaatctcttttagccccttaagtttctcact  8747000                                                                                 ----------->GT1                                                                                --------->LBD16                                             --------->LBD16                  <------NtERF2                                            --------->DEAR3(1)                <---------LBD16                                         --------->DEAR3(1)                  ------>NtERF2                                         <---------ALFIN1                    --------->MYB52(1)                                      --------->ANAC46                      --------->DEAR3(1)                                      --------->ANAC58                      <---------ALFIN1                                  --------->ANAC58                         --------->MYB46(3)                                  --------->ANAC46                         ----------->HVH21                                  --------->ANAC58                        <---------ATERF1(1)                                <---------ALFIN1                          <-----------HVH21                                --------->AtMYB61                         ------>NtERF2                               --------->MYB46(3)                         --------->LBD16                            --------->MYB46(3) ------>NtERF2             --------->ANAC58                          --------->ANAC58 <------NtERF2                 --------->ANAC46          --                          --------->ANAC58------>NtERF2                  --------->ANAC58        ----                          --------->ANAC46<---------At5g28300           <---------LBD16          ----                      --------->AtLEC2--------->ANAC58               ------>ZmHOX2a(1)           ----              <----------DOF2 -------->P--------->MYB46(3)     <---------ATERF1(1) ----------->HVH21 -------->LBD16       ------>ZmHOX2a(1) <---------MYB55(2)  ----------------------->TaNAC69(2)-------   tccccaattccctcttctttcttcctgcaaacaaccactccagccaccgcgactgcgagactcgtcgtctcctctccgccaccgggtgaaactgaaacta  8747100                             <---------ARR14(2)                             --------->ARR14(2)                            <---------MYB52(1)                        ------>NtERF2   --------->ATHB12                    --------->ANAC46    <---------ICU4            --------->At4g35610       <---------ALFIN1 <---------At4g35610          <---------GLK1(2)          --------->YAB1       --------->ANAC46--------->DEAR3(1) --------->At4g35610 <-----------HVH21 --------->AHL20(2) -------->DOF2      --------->ANAC58    --------->YAB1--------->GLK1(2)      --------->YAB1 ----->ANAC46       --------->ANAC58   <---------YAB1--------->ARR14(2)     <---------YAB1 ----->ANAC58     ---------->DOF2    <---------ICU4  <---------ARR14(2)   --------->YAB1            *TSS ----->ANAC58   ---------->DOF2      --------->YAB1----------->ARR10     --------->ICU4   ---------->DOF2 -->TOE1(2)    --------->ANAC46   --------->YAB1 <---------At4g35610     <---------YAB1  --------->MYB52(1)   cgaaagtacccacatccacaaaacgcagccgtttcttcataatcatcggagagcagattctctctatcagtggccatgataataaaaaacaaaacagcga  8747200                                                               <---------ETT(2)                                                               --------->WRKY38(1)                                                               --------->ETT(2)                                                             <-----------HVH21                                                             --------->REM1(2)                                                            --------->ALFIN1                                                          <---------TGA1a                                                          ==================MYC_MYB                                                          <---------ANAC46                                                          <---------ANAC58                                                          <---------ANAC55(1)                                                          <---------ANAC58                                                          <---------O2                                                          <---------bZIP60(2)                                                         <------NtERF2                                                       --------->ALFIN1                                                       ----------->HVH21                                                      <-------MYC4                                                      <-------MYC3                                                      <-------PIF5                                                      ------->MYC2                                                      <-------MYC2                                                      ------->MYC3                                                      ------->PIF5                                                      -------->ABF1                                                      ------->MYC4                                                     >>>>>>>>>>ABI5     <---------ANAC58                                                     >>>>>>>>>>AtMYC2   <---------ANAC58                                                     >>>>>>>>>>HY5     <---------MYB46(3)                                                     =======================MYC_MYB                                                     <---------TGA1a   --------->MYB55(2)                                                     --------->O2     <---------MYB55(1)        <----                                                     --------->ANAC55(2)<---------ANAC46     <-------                                                     <---------ANAC55(2)<------MYB83--------->ATHB12                            <-----------TBP          <---------bZIP60(2)<------MYB46(1)  <---------ANAC58                          <---------------AGL15      <---------O2    <---------MYB52(1)  <---------ANAC46         <---------TOE2(3)--------------->AGL15      --------->TGA1a<-------GAMYB  --------->ICU4       ---------->DOF2   <-----------------AGL3  <------ZmHOX2a(1) <---------MYB46(3)    <---------ANAC58  <---------YAB1         ----------------->AGL3  ----------------->PIF3(1)         <---------ZAT6   gtttttgattaaaggaagagactcgatactatatataggtgaatgagtttaggacacgtggcgtgtcgaccgttgggtgatagtagtgatggggtatgtt  8747300                                                                --------->YAB1                                                                -------->HAHB4                                                                <---------ICU4         --------->ATERF1(1)                                       --------->At4g35610     <---------ATHB12      <---------ANAC58                             --------->bZIP60(1)               --------->ICU4        <---------ANAC58                             <---------bZIP60(1)   --------->ARR14(1)                <---------ANAC46                             ==================================================bZIP_DOF<------NtERF2         <---------YAB1      <---------TGA1a      --------->ARR14(2)       <---------At4g35610      <---------MYB52(1)     <---------ANAC46     <---------ARR14(2)       --------->ZAT2     ==================================MYC_MYB    <---------GLK1(2) ---------->DOF2 <---------LBD16     <-------GAMYB         <---------ZAT14       <------ZmHOX2a(1)<---------YAB1--------->REM1(2)  <-    <---------ZAT6         --------->ZAT14      <---------YAB1<---------TOE2(3)----------->HVH21   <- -----MYB46(3)      ----------->HVH21 --------->ALFIN1   ------>NtERF2     <---------ZAT2 --------->At4g35610 ----RAV1(1)      --------->ALFIN1   <------ZmHOX2a(1)--------->At4g35610  --------->At4g35610-------   gttggactgttatgagaagagtgtgacagtgatgtgagaggagcgggattaggattcgctggctaatgatgaaagacagctgtgaaggcgggagcgaaac  8747400                                                                                                  ---                                                                                                 ----                                                                                                -----                                   <---------YAB1                                        <---------ARR11(3)                                 --------->YAB1                                          <---------ARR14(2)                                 -------->HAHB4                                          --------->ARR14(2)                                --------->ICU4                                           --------->ARR11(3)       <----------DOF2     --------->YAB1                                               <---------GLK1(1)   <----------DOF2         <------ZmHOX2a(1)                                            --------->GLK1(1)  <---------ANAC58       <---------TOE2(3)                                             <---------ARR14(2)  <---------ANAC58       <---------TOE1(3)                            --------->TOE1(3)--------->ARR14(2) --------MYB52(1)    <----------DOF2         --------->ATHB12         --------->TOE2(3)--------->ARR11(3) -------P          ---------->ID1<---------ICU4             --------->ICU4             <---------ARR11(3) -->MYB52(1)  <----------DOF2<---------YAB1 --------->AHL20(2)   <---------AHL20(2)   <------ZmHOX2a(1)   ggttgctttcttttctcttttgtctttaaggataattatgaaacgatttattgatatgactaaatattaaaactttaaacaaattagaggatatctgaaa  8747500                                                    --------->YAB1                        <---------AHL20(2)       --------->YAB1                 -------->ATHB1                 <---------YAB1                                     <-                 <--------HAHB4               --------->YAB1                                       --                 --------->ATHB51            --------->ICU4                                      ----                 <---------ICU4            --------->YAB1                 <---------AHL20(2)     <---                 --------->YAB1           --------->ICU4            <---------CCA1(1)          ------                <---------YAB1       <-------GAMYB <---------YAB1  --------->ARR11(3)          <-----     ----------->GT1  <---------YAB1--------->MYB55(2) <---------ICU4    <---------YAB1      <-------    --------->DAG2   <---------AHL20(2)   <---------YAB1  --------->MYB52(1)   <---------YAB1--------   ---------->DOF2 <---------YAB1   --------->MYB111(2)--------->YAB1   <---------AHL20(2) --------->AHL20(2) -------->GT1   <---------ATHB51    <---------MYB46(3)<---------YAB1<---------RVE1(1)      <---------AHL20(2) ----->DAG2     --------->ICU4     <--------P<---------YAB1        <---------ARR11(3)    --------->AHL20(2) ----->DOF2  <---------YAB1  --------->ARR11(3) --------->ICU4  <---------WOX13(1)       <---------AHL20(2)   aagtgaaaagtgattacaattattattttaagaactggttgttgatgatgatgatgataataactgatagatatttttattttgatactatatatatata  8747600    --------->AHL20(1)    --------->ARR11(3)    <---------AHL20(1)   <---------AHL20(2) --------->AHL20(2) <---------AHL20(2) --------AHL20(2) ------->AHL20(2) ----->AHL20(2) ------AHL20(2)                                                                       --------------- --->AHL20(2)                                                                    ------>MYB46(1) ----AHL20(2)                                                                    ------>MYB83 --AHL20(2)                                             <---------YAB1         <---------MYB59 ->AHL20(2)             --------->AHL20(2)        --------->AHL20(2)        <-----------GT1   tatatatatattggtttcattttcatatatataagagagaaattttgaccaaaaaaatatgattctaaaaacgttgaattaccaaatatttgtactagtt  8747700  Previous    Next  AGI:  At5g25240.1    Description:  similar to NHL repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G14890.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO67727.1) Range:  from: 8746608    to: 8747200    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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