Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100    ------>NtERF2 --------->DEAR3(1) --------->RAP2.6(2) ------->GAMYB--------->AHL20(1) -------->DEAR3(2)                                                        --------->YAB1 -------->ATERF1(1)                                                       <--------ATHB1 -------->RAP2.3(1)                                                      <---------ATHB51 --------ATERF1(1)                                                       <---------YAB1 --------At4g35610                                        --------->AHL20(2) ------->ZAT2 <---------ARR11(3)                --------->AHL20(2)  --------->ANAC58            ----- ------->At4g35610                              ---------->DOF2     --------->ANAC58            <---- ---->At4g35610                              --------->TOE2(3) <---------------AtSPL8         <------ -----At4g35610--------->AHL20(2)         ----------->RAV1(1)  --------------->AtSPL8   <------------ ---->ZAT2    <---------AHL20(1)       --------->ANAC46   <---------AHL20(2)            -------------   cagccgactaaaccaaaatatttagaaagttttccaaaaacaaacaacattaaaacacatttaaactcgtacacaataatagaaactaaactatttttag  13274900                                                                             <---------ALFIN1                                                                            <---------MYB55(2)                                                                   ---------->DOF2                                                              ------>ZmHOX2a(2)                                                             --------->GLK1(1)                                                             <---------GLK1(1)                     <---------ANAC55(2)                     <------ZmHOX2a(2)                     <---------ANAC58                       --------->ARR11(3)   ---------->DOF2   <---------ANAC46                       <---------ARR11(3) ---->At4g35610      <---------ANAC58                       <---------ARR14(2)   <---------HSFB2a(2) -----At4g35610      <---------ANAC55(1)         <---------HSFB2a(2)        --------->MYB46(3) -----GT1            <---------YAB1    <---------ICU4       --------->ARR14(2)   --------->HSFB2a(2) ---AGL15       <---------ICU4        <---------YAB1<---------AGP1------>ZmHOX2a(1) -->AGL15     ----------->RAV1(1)--------->YAB1  --------->HSFB2a(2)       ------->TEIL   cagactaaagtctaaacaacattacgtttaaaaattgataatcagtgttttatagaactggcgatctcctaaagatgaaccaccgagaagtttcaagata  13275000                                                                                     ------>ZmHOX2a(1)                                                                               --------->HSFC1(2)                                                                               <---------HSFC1(2)                                                                               <---------HSFB2a(1)                                                                               --------->HSFB2a(1)                                                                              ------->TEIL                                                                              --------->ARR14(2)                                                                              <---------ARR14(2)                                                     ----------->HVH21        <-----------ARR10                                                  <---------WRKY38(1)         <---------ARR11(1)         --------->AHL20(2)                       <---------WRKY12           <---------ARR14(1)        --------->YAB1                           ------------>CBF            <---------CCA1(2)       --------->AHL20(2)                        --------->WRKY18(1)  ------------>CBF     <---------     --------->YAB1        <---------CCA1(2) <---------AtLEC2     <-----------GT1   --------->TOE2(3)   aaaacaaaaataaaaatagccaaacactcttatctattcatccatttgcaggtcaatgacaccgtatttttccacaatcgaatcttccttattctttaca  13275100                                                                        --------->At4g35610                                                                   <---------TGA1a                                                                   --------->TGA1a                                                                   --------->ANAC58                                                                   --------->O2                                                                   <---------O2                                               ---------->DOF2     <---------ANAC55(2)                                            <-----------HVH21      --------->ANAC58                                   <------------CBF                --------->ANAC55(2)                                 <---------YAB1==============================bZIP_DOF ------>ZmHOX2a(1)                                --------->AHL20(2)             <-----------HVH21<-----------GT1 -DOF2       ------->TEIL       <---------AHL20(2)        ------>ZmHOX2a(1) ----------->TBP   -------   caaacttcttctctgtatgtaagtaaactaatattaaaattgaacttgtcaaagactttcctcttggtcacgtctgctatatatactccttcattcacac  13275200                                                                                      <-----------HVH21                                                                                     ----------->HVH21                                                                                    ------->MYC3                                                                                    ------->MYC2                                                                                    <-------MYC2                                                                                    <-------MYC3                                                                                   <---------ANAC46                                                                                   <---------ANAC58                                                                                   <---------ANAC55(2)                                                                                   --------->O2                                                                                   <---------ANAC55(1)                                                                                   --------->ANAC55(2)                                                                                   <---------O2                                                                                   <---------ANAC58                                                                                   <---------bZIP60(2)                                                                                   <---------TGA1a                                                                                   --------->TGA1a                                                                                ----------->HVH21                                                                               <-----------HVH21                                                                              ----------->HVH21                                                                             <-------MYC2                                                                             ------->MYC3                                                                             ------->MYC2                                                                             <-------MYC3                                                                            <---------TGA1a                                                                            --------->TGA1a                                                                            <---------bZIP60(2)                                                                            --------->ANAC55(2)                                                                            --------->O2                                                                            <---------ANAC58                                                                            <---------O2                                                                            <---------ANAC58                                                                            <---------ANAC55(1)                                                                            <---------ANAC46              ------->GAMYB                                                 <---------ANAC55(2)             <---------ALFIN1                                            ----------->HVH21     <-----------GT1   <----------DOF2                               <---------At4g35610     <-------TEIL  ----------------------->TaNAC69(2)                                 --------->At4g35610<-----------RAV1(2) -->ANAC46 ----------->RAV1(1)                         <------------CBF <-----------HVH21>>>>>>>GRF7   aaatgtttaactccaacacacttctctttctctcaacctctctccctctctctctccgattgtgtttttagagctgtcacgtgtcacgtgtcaggttcga  13275300                                                                                           <---------LBD16                                       <------ZmHOX2a(2)                                --------->ANAC58                                      --------->ARR11(3)                      <-------GAMYB<---------At5g28300                                      <---------ARR11(3)                     <---------DEAR3(2)                             -------->HAHB4                                  <---------MYB46(3)                             --------->ATHB12                               <---------DEAR3(1)                             <---------ICU4                                 <---------RAP2.6(2)                            --------->ICU4                                  <---------ANAC46                            <---------YAB1                                  <---------ANAC58                            <---------ATHB12                                <---------ANAC58---------                          --------->YAB1                                  ------------>AtMYB77                       =======================HOX2a_HOX2a                --------->ALFIN1 --------->MYB52(1)                       ------>ZmHOX2a(1)                            --------->HSFB2a(2) --------->ANAC58         --------->AHL20(2)<---------TOE2(3)                    <----------DOF2<---------ARR14(2)   agctctaagaaaaaaatgggtcttcctctaatgatggagagatcatcaaacaacaacaacgtcgagctttctcgagtggcggtttcagacactcacggcg  13275400                  <------NtERF2                  --------->At4g35610                  <---------ZAT2                  --------->ZAT2                 <---------DEAR3(2)                 <---------ATERF1(1)       ------>ZmHOX2a(1)                 ------>NtERF2           <---------ICU4                --------->ATERF1(2)    --------->ARR11(3)                --------->DEAR3(1)     <---------ARR14(2)                <---------DEAR3(1)     --------->ARR14(2)                <---------ATERF1(2)    <---------ARR11(3)                                           <               <---------LBD16--------->SPL7        ------->TEIL    --------->LBD16                 -               --------->ATERF1(1)     --------->GLK1(2)          <---------LBD16                   -       --------->ZAT14    <---------At4g35610       --------->GLK1(2)                              --    <---------At5g28300   --------->At4g35610--------->SPL7<-----------GT1 --------->AtLEC2       <-- >ANAC46 --------->SPL7---------->DOF2--------->GLK1(1) --------->YAB1 <-----------HVH21        -----   aagactcaccgtacttcgccggctggaaagcttacgacgaaaatccttacgacgaatctcataacccttccggtgtcatccaaatgggtctcgctgagaa  13275500         <---------ARR11(3)         --------->ARR11(3)      --------->AHL20(2)             --------->AHL20(2)      <---------AHL20(2)         <---------AHL20(2) ---------ANAC55(2)              <---------YAB1                 --------->ICU4 ---------->GT1            <---------DAG2      <---------AHL20(1)               ===================HOX2a_HOX2a -------->ANAC55(2)        <----------DOF2     --------->AHL20(1)               <------ZmHOX2a(2) ------->MYB59         <---------WRKY45  ----------->GT1        --------->AHL20(2)          ------>ZmHOX2a(1) ---------RAV1(2)      <---------WRKY38(1)     --------->ARR11(3)         <----------DOF2   ========= ---->GLK1(2)         <<<<<<<<<WRKY6 <---------AHL20(2)         <---------AHL20(2)   <---------AHL20(2)   tcaggtaataaaatctttcatatagtcaacttttttttattaattgttatatattgcgataatgtattaattgtctctttcgatcatttttttcctacaa  13275600                                                                                        --------->REM1(2)                                                                                      --------->LBD16                                                                                     <---------ANAC55(1)                                                                                     <---------ANAC58                                                                                     ----------->GT1                                                                                     --------->ANAC55(2)                                                                                     <---------ANAC46                                                                                     <---------ANAC55(2)                                                 <---------HSFC1(2)                  <---------ANAC58                                                 --------->HSFB2a(1)           <---------TOE1(2)                                                 <---------HSFB2a(1)          ------>ZmHOX2a(1)                                         --------->ARR14(2)                   --------->LBD16                                         <---------ARR14(2)              --------->GLK1(1)                           <---------ANAC58      --------->HSFC1(2)      <---------GLK1(1)                           <---------ANAC46 --------->HSFB2a(2)          <---------At4g35610 --------                           <---------ANAC58 <---------HSFB2a(2)          --------->At4g35610 --------             ------>ZmHOX2a(2)           --------->GLK1(2)         ---------->DOF2--------->ARR14(2)           --------->ARR11(3)        >>>>>>>>>TBF1              =====================HOX2a_HOX2a           <---------ARR11(3)  <---------HSFB2a(2)        --------->ALFIN1  ----------->RAV1(2) ===================HOX2a_HOX2a--------->HSFB2a(2)  <-------TEIL<------ZmHOX2a(2) <---------ARR14(2)   acaggtctcgtttgatcttcttgaaacttacttggagaagaagaatccagaaggttcgatgtggggatcaaaaggagctcctgggttccgtgaaaacgca  13275700                                                                                                  ---                                                                                                 <---                                                                        ---------->DOF2          ====                                                                      <------NtERF2             -----                                                                   <------ZmHOX2a(1)            <----                                                                --------->HSFB2a(2)             <----                                                                <---------HSFB2a(2)       <---------WRKY18(1)                                                  <---------AtLEC2 ===========================HOX2a_HOX2a                                                  <---------ANAC46 ==================================                                           <---------ANAC58   <-------TEIL               ============                                   --------->ANAC58         <---------ARR14(2)           ----------->HVH21                                   --------->ANAC46         --------->ARR14(2)           ------>ZmHOX2a(1)      --------->ZAT6               --------->ANAC58         --------->ARR11(1)           ============ ->ANAC58                 <----------DOF2  <---------ANAC58 <---------GLK1(2)          ============== ->ANAC58   <---------ALFIN1     ---------->DOF2 <-------TEIL--------->CCA1(2)         ------>ZmHOX2a(2)   ttgtttcaagactaccacggtctcaaaactttcagacaagccatggctagtttcatggaacagattcgaggaggcaaagctagatttgatcctgaccgga  13275800  Previous    Next  AGI:  At4g26200.1    Description:  ACS7 (1-Amino-cyclopropane-1-carboxylate synthase 7); 1-aminocyclopropane-1-carboxylate synthase. Identical to 1-aminocyclopropane-1-carboxylate synthase 7 (ACS7) [Arabidopsis Thaliana] (GB:Q9STR4); similar to ETO3 (ETHYLENE OVERPRODUCING 3), 1-aminocyclopropane-1-carboxylate synthase [Arabidopsis thaliana] (TAIR:AT3G49700.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN66901.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65393.1); similar to ACC synthase [Brassica oleracea var. italica] (GB:AAL37503.1); contains InterPro domain Aminotransferases, class-I, pyridoxal-phosphate-binding site; (InterPro:IPR004838); co Range:  from: 13275316    to: 13277197    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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