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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<------
ZmHOX2a(1)
--------
--------->
ZAT14
<-------
------>
ZmHOX2a(2)
<---------
ZAT14
---------
<---------
ARR11(3)
<---------
ANAC55(2)
--------->
YAB1
--------->
ARR11(3)
---------->
DOF2
<---------
ANAC46
<---------
AHL20(2)
<---------
YAB1
--------->
YAB1
--------->
MYB59
--------->
AHL20(2)
--------->
GLK1(2)
--------->
YAB1
--------->
MYB59
----------->
GT1
----------->
GT1
--------->
ICU4
----------->
GT1
<-----------------------
TaNAC69(2)
agagattatgatctaagcccaaaatttcatagtttttaaaaaatggtaatcaaaagttaagtagttaagtatacaggaaaaattttaaattgtaatattt
13062900
<------
MYB83
<------
MYB46(1)
--------->
ICU4
<---------
MYB52(1)
--------->
AHL20(2)
--------->
YAB1
<---------------
AGL15
----------->
GT1
------>
ZmHOX2a(1)
<---------
LBD16
--------->
ANAC46
--------->
At4g35610
->
AHL20(1)
<---------
RVE1(1)
<---------
AHL20(2)
--------->
YAB1
--
AHL20(1)
<---------
CCA1(1)
--------->
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
>
ICU4
<---------
AHL20(2)
----------->
GT1
--------------->
AGL15
----------->
GT1
---------->
DOF2
<
tttcctataaaaattggatatttatctggagaaaataaatactccatttggttccatcaattttgaaaaaaaatcagaagaaagaaaaaattagaaattg
13063000
<---------
HSFB2a(2)
------>
ZmHOX2a(2)
<------
ZmHOX2a(2)
--------->
CCA1(2)
<---------
AGP1
--------->
ARR14(2)
<---------
ARR14(2)
--------->
AGP1
--------->
ARR11(3)
------>
MYB83
------>
MYB46(1)
-------->
P
----------->
RAV1(1)
--------->
TOE1(1)
--------->
TOE2(1)
--------->
At4g35610
--------->
YAB1
<---------
ARR11(3)
<---------
YAB1
<-----------
ARR10
<---------
YAB1
<---------
ATHB12
--------->
ARR14(3)
<---------
ICU4
------>
ZmHOX2a(1)
<---------
ARR14(3)
--------->
ICU4
--------->
YAB1
==========================
HOX2a_HOX2a
<---------
YAB1
<---------
ARR11(3)
===========================
HOX2a_HOX2a
--------->
YAB1
<---------
ATHB12
--------->
MYB52(1)
-----------
GT1
--------->
MYB46(3)
------->
TEIL
<---------
AtLEC2
<----------
DOF2
------->
GAMYB
tatcactctcctatcatcggaccaacaagatctagacaattgttcatgaatcataatttttgtatgtctatcccaataactttcttcaaacataacagtc
13063100
---------->
DOF2
--------->
YAB1
<---------
TOE2(3)
---------->
DOF2
--------->
MYB52(1)
<---------
TOE2(3)
<------
ZmHOX2a(1)
<---------
ARR11(3)
<---------
AHL20(2)
--------->
ARR11(3)
--------->
AHL20(2)
--------->
DAG2
--------->
AHL20(1)
--------->
AHL20(1)
---------->
DOF2
<---------
YAB1
<---------
AHL20(1)
<---------
AHL20(1)
----------->
GT1
<----------
DOF2
<---------
CCA1(2)
--------->
YAB1
<---------
WOX13(1)
<-----------
GT1
<
tattctaatatcttacatgttaagaaataataaaataaaggattgataaagaaaaaaaaaagttttttctttcttagttatttttaaaacaaaaatacaa
13063200
<---------
YAB1
<---------
ANAC58
--------->
YAB1
--------->
LBD16
<---------
ANAC58
<----------
DOF2
--------->
HSFB2a(2)
<---------
MYB46(3)
*
TSS
<---------
AHL20(2)
<---
-----------
GT1
<---------
AHL20(2)
<--------
P
--------------->
AtSPL3
<---------
HSFB2a(2)
atttactgatcaaatatttgctggatttttttgtgatttgagcctcaagggttgttttgtttgcccgtacta
ggcctttataatttttcttccagagctc
13063300
<---
--------->
LBD16
<----------
DOF2
------>
ZmHOX2a(1)
<-----------
HVH21
------>
NtERF2
<---------
ALFIN1
<---------
ANAC58
--------->
DEAR3(1)
------>
ZmHOX2a(1)
<---------
DAG2
<---------
DAG2
<------
NtERF2
<---------
ALFIN1
<----------
DOF2
<----------
DOF2
<---------
DEAR3(1)
------>
NtERF2
--------->
ANAC46
<-----------
GT1
<---------
ANAC58
<---------
LBD16
<---
-------
DOF2
------>
ZmHOX2a(1)
<-----------
GT1
<-----------
GT1
--------------------->
WRI1
ttttgcctcctcctcctctctccgaaattttctctcatttttctctcttctccttttttgcgtcccatcactttctctgattttctcggcgactttcttc
13063400
------>
ZmHOX2a(2)
<---------
ARR14(2)
<------
ZmHOX2a(1)
--------->
ARR14(2)
<---------
HSFB2a(1)
------>
NtERF2
<---------
HSFC1(2)
--------->
DEAR3(1)
-
--------->
HSFC1(2)
--------->
ANAC46
<
<-----------
RAV1(2)
=====================
HOX2a_HOX2a
----
--------->
LBD16
------>
ZmHOX2a(1)
------
--------->
At4g35610
===============================
HOX2a_HOX2a
<---------
MYB52(1)
<-----
==========================
HOX2a_HOX2a
======================
HOX2a_HOX2a
<-----
------>
ZmHOX2a(1)
============================
HOX2a_HOX2a
------>
ZmHOX2a(2)
<-----
<---------
ZAT2
<---------
LBD16
========================
HOX2a_HOX2a
<-----
--------->
ANAC58
--------->
HSFB2a(2)
=========================
HOX2a_HOX2a
<------
--------->
ANAC58
<---------
HSFB2a(2)
------>
ZmHOX2a(1)
<------
ZmHOX2a(2)
<----------
------
ANAC58
--------->
ARR14(2)
--------------------->
WRI1
<-----------
GT1
------
ANAC58
<---------
ARR14(2)
<---------
GLK1(2)
<-----------
GT1
<---------
At5g28300
<------
cgtcccaagctcctctgaatccccagaaggatcgctctcgattcttctcttcctcctattctccgcccgatctgttactgtttttttttttactg
gtacg
13063500
--------->
MYB46(3)
-------->
P
------>
ZmHOX2a(2)
-------->
At4g35610
---------
At4g35610
------->
HVH21
--->
ANAC55(2)
----
ANAC58
----
ANAC55(2)
----
ANAC46
----
ANAC58
--------->
ATHB12
-----------------
TaNAC69(2)
<---------
AHL20(2)
-
-----
AtSPL3
<---------
MYB52(1)
<
-
TEIL
<-----------
GT1
--------->
ANAC46
-----
tgatcggactaaccattctcttctcatgaacacacactaaatcgatttgaattcattccttcgtctatacatcactggtatttgattagatttcaaaccg
13063600
<---------
ANAC58
<---------
ANAC58
<------
NtERF2
<---------
bZIP60(2)
<------
MYB83
<------
MYB46(1)
<---------
ANAC58
<---------
ANAC58
<---------
AtMYB61
--------->
MYB46(2)
--------->
MYB111(2)
--------->
MYB111(1)
--------->
MYB55(2)
--------->
MYB59
--------->
MYB52(2)
--------->
ANAC58
<---------
YAB1
<---------
MYB55(1)
--------->
At4g35610
--------->
ANAC58
-------->
ARR14(2)
<---------
MYB52(1)
<---------
At4g35610
--------->
ANAC46
---------
ARR14(2)
<-----------
HVH21
<------
ZmHOX2a(1)
---------->
ID1
---->
LBD16
<-----------
GT1
<---------
ANAC46
--------->
MYB59
<-----------
GT1
cgaatactatgatttcaattccgatttttctctgttaggtggcttagtcatggaggaaattaggcatctgtctgtgttagtgattttgacgctatttgaa
13063700
--------->
GLK1(2)
<---------
ARR14(2)
<---------
ANAC58
<---------
ANAC46
--------->
AHL20(2)
<---------
HSFC1(2)
<---------
AHL20(2)
<---------
HSFB2a(1)
<---------
WOX13(1)
----------->
ARR10
<-----------
RAV1(1)
<---------
ARR14(2)
<---------
ANAC46
--------->
ZAT14
<----------
DOF2
<---------
ANAC46
--------->
ARR14(2)
<---------
ANAC58
<-------
TEIL
<-------
TEIL
<------
ZmHOX2a(1)
------->
TEIL
tcgaatactgttgatttatatagttgcttaggggaagaatcggttcagtatataggtgctttgtttataggaatttgtgttttgtgaatgtatgttgcag
13063800
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AGI:
At4g25610.1
Description:
zinc finger (C2H2 type) family protein. similar to unnamed protein product [Vitis vinifera] (GB:CAO49440.1); contains InterPro domain Zinc finger, C2H2-like; (InterPro:IPR015880); contains InterPro domain Zinc finger, C2H2-type; (InterPro:IPR007087)
Range:
from: 13063273
to: 13067237
Orientation: Forward
Links:
TAIR
MIPS
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when using AthaMap.
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