Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <-----------GT1                                            <---------AHL20(2)                                            --------->AHL20(2)                                            <---------AHL20(1)       --------->YAB1          --------->AHL20(2)               <---------AHL20(2)       <---------YAB1              <----      --------->AHL20(2)                   --------->AHL20(2)      --------->AHL20(2)     --------->ANAC58      <---------AHL20(2)              <----------DOF2  --------->ANAC46          <---------ICU4 ----- -------->DOF2                        <---------DAG2<---------At5g28300        ----------->RAV1(1) --->ANAC46                     <-----------GT1 <---------ICU4     <---------AHL20(2)     --------->ANAC58   agaaagaattaattcaatagattaatctaacaattttctgctttattaaatttttaccctcaaaaacattttaataagagacaacattactgaagccaat  19574800                  <------ZmHOX2a(2)                  --------->CCA1(2)                 <---------ARR11(3)                 --------->ARR14(2)       ----------->GT1                    --------->ATHB51       --------->At4g35610      <---------ARR11(3)                                <---------YAB1      --------->ALFIN1      <---------ANAC58                              ------>ZmHOX2a(2)     ====================HOX2a_HOX2a      --------->ATHB12              <---------ARR14(2)     <------ZmHOX2a(1)      <---------ANAC58                            --------->ARR11(3) -----ATHB12     <---------ARR14(2)       -------->ATHB1                --------->ARR14(2)    ------- ----->DOF2      --------->ARR11(3)      <---------YAB1                 <---------ARR11(3)  <--------   aagccgaggaggtgaagaagatccaagttttcttgatattcgtattattggtgtttcatgagaaaacttaagtcgatcttgtttatgtttgaaaactaac  19574900                                  <---------ANAC46                                  <---------ANAC55(1)                                  <---------ANAC58                                  <---------ANAC58                    --------->ARR11(3)                    --------->GLK1(2)                    --------->ARR14(3)                                                         <-----                    <---------ARR11(3)                                         --------->GLK1(2)                    <---------ARR14(3)                                         --------->ARR14(2) -->MYB52(1) <----------ID1  <---------ANAC58                    --------->TOE2(3)       --------->YAB1 -MYB52(2) ---------->DOF2   <---------ANAC58                 <-----------GT1 <---------GLK1(2)------   acatatcaatactgaaagacaaaatcttgagacttgccgtgtcaaaattctacttacaaggattttacataaatgatacagaatccaatatgcataatat  19575000                                                 <------ZmHOX2a(1)                                                 ===============================HOX2a_HOX2a                                               <---------TOE2(2)                                 ----------->HVH21                                --------------->AGL15                                <---------------AGL15                               ----------->RAV1(2)                               ----------------->AGL1                               <---------ANAC55(2)--------->ARR11(3)                               --------->ANAC55(2)<---------ARR11(3)                             <-----------GT1   <---------TOE1(2)                          <---------ICU4     --------->TOE1(2)                      --------->AHL20(2)     --------->TOE2(2)                    ----------->GT1   <---------LBD16                   <---------TOE2(3) <---------LBD16                <---------AHL20(2)   ------>ZmHOX2a(2)        --------->MYB52(2)                 ----                --------->AHL20(2)   ===================HOX2a_HOX2a<-------GAMYB            ---------      --------->AHL20(2) --------->ICU4--------->LBD16      <---------MYB52(1)          --------->LBD16 ----AHL20(1)<---------ARR11(3)----------------->AG<------ZmHOX2a(2)     <------ZmHOX2a(2)  <-------- --->AHL20(1)--------->ARR11(3)<-----------------AGL1      --------->TOE2(3)        <-----------GT1   ataacaaaaaatatagattttaatgtaaatattacctgatcggggaacgtaggatcatcttcgttagtcggatggatcactaaatttttccgagtaccct  19575100                                 ---------->DOF2                       ------>NtERF2                      ------>NtERF2                      --------->LBD16   --------->YAB1    <---------RAP2.6(2)  <------ZmHOX2a(2) <---------LBD16  <---------ATHB12<---------ARR14(2)                             <-----------------AGL1 -->NtERF2        --------->ARR14(2)                            --------->REM1(1) >ZAT18          <---------GLK1(1)                           --------->TOE2(3) -ZAT14          --------->GLK1(1)--------->YAB1             --------->TOE1(3)                    ---   gccgatcataagataacacatttccggccaaaacaataagcagtattgctactaaacccaaaaccttcaccattttggcgaaatagagagagagaagaga  19575200                     --------->YAB1            --------->At4g35610                    ----------------------->TaNAC69(2)          ------>ZmHOX2a(2)               <-----------TBP           <----------DOF2              <---         <------ZmHOX2a(2)             ----------->GT1    ------>ZmHOX2a(1)                ---------- ------->DOF2 ----------->HVH21        <---------ZAT6   <---------ICU4      <-----------------AGL1 --   gaaagagagagatcggatgacaagaatgaattagggacacagtgttatatagtagtaatcctttccccttctttttgttttcattttggaaacttgtaaa  19575300                                                                                                 ----                                                                  --------->AHL20(2)             ----                                     <---------DAG2              --------->YAB1                  <---                                     <----------DOF2--------->TOE2(3)                  <------------CBF             >>>>>>>>>>WRKY26  <---------------AtSPL8     --------->AHL20(2)        ------------>CBF             >>>>>>>>>>WRKY43  --------------->AtSPL8  --------->YAB1 --------->AHL20(2)    --------- ---------CBF>>>>>>>>>>WRKY38 <---------WOX13(1)  <---------AHL20(2)--------->YAB1 --------->ANAC46 - ->GT1   ------->TEIL        <------------CBF <---------ATHB12  --------->AHL20(2) --------->ANAC58 - --------->GT1       --------->TOE2(3)     --------->ZAT6 --------->YAB1           --------->ANAC58 -   attggaaaatgtatttgaccaaaacttaactaattggtactttttccactaattcattaataaaaaataaaaataaaaactgtgcaagcaattgcaaagt  19575400                                                                        <---------DEAR3(1)                                                                       --------->ATERF1(1)                                                                   --------->ALFIN1                                                                   --------->ATERF1(1)                                                                  --------->ALFIN1                                                                  --------->ATERF1(1)                                                                 --------->ALFIN1                                                                 --------->ATERF1(1)                                                                --------->ALFIN1                                                                --------->ATERF1(1)                                                               --------->ATERF1(1)                                                               --------->ALFIN1                                                              --------->ATERF1(1)                                                              --------->ALFIN1     ------>ZmHOX2a(1)                                                             --------->ATERF1(1)   ==================                                                             --------->ALFIN1     --------->TOE2(2)                                                            --------->ATERF1(1)   --------->TOE1(2)                                           --------->TOE2(3)--------->ALFIN1   --------->ARR14(2)                                         ------->TEIL      --------->ATERF1(1) <---------ARR14(2)                                      --------->ANAC55(2)  --------->ALFIN1    <---------ARR11(3)                                      <---------ANAC55(2) --------->ALFIN1--------->ZAT18   ------->TEIL                    --------->ICU4      <---------LBD16--------->ATERF1(1) ----->ZAT14                     <---------ICU4       <---------LBD16 --------->ALFIN1 ----->ZAT18                     --------->YAB1      <---------LBD16  <---------DEAR3(1) ----TEIL                       <---------ATHB12   <---------ARR14(2)--------->ATERF1(1) ->DOF2                         --------->ICU4     --------->ARR14(2)--------->ALFIN1 -------->ANAC58              --------->GLK1(1)    --------->KAN4(2)--------->ALFIN1 --------->ANAC46 -------->ANAC46              <---------GLK1(1)   <----------TaMYB80--------->ATERF1(1) -------->ANAC58        <---------AtLEC2<---------CCA1(2)--------->ALFIN1 <------NtERF2          ----   acacgaatgtagcatgttcaaaacctgcatggaaatcattatgtatcttagtatattcggggggggggggggggggggcagtatcctacgagactacgat  19575500              <----------DOF2           <---------ARR11(3)           --------->ARR11(3)     --------->GLK1(2)     --------->ARR11(3)    --------->YAB1     <---------ARR11(3)  ------>MYB46(1)                                         <---------GLK1(2)    --------->CCA1(1)    ------>MYB83                             --------->CCA1(2)    --------->RVE1(1)  <---------MYB59                           --------->ARR11(3) ===================HOX2a_HOX2a                                  <---------ARR11(3) --------->ARR11(3) ------->GT1 ------>ZmHOX2a(2) ---------->DOF2        ---------->DOF2    <----------DOF2----------->GT1   ggaaaaaaatcttgatctttgtataccaaatataaaagttatatgtgttcttaaacaaaagtcatgagatatgtgctttgctagattatctagtaaaaca  19575600                          --------->TOE2(3)                        <---------AHL20(2)                    <---------AHL20(2)                    --------->AHL20(2)                             --------->YAB1                   <---------AHL20(2)                      <---------GLK1(2)             --------->YAB1                               -------->HAHB4          --------->HSFB2a(2)                <----------DOF2   <---------YAB1              <---------AHL20(2)          <---------HSFB2a(2)           <---------GLK1(1)--------->ICU4              <-----------GT1 <---------ANAC58  <---------AHL20(1)   --------->GLK1(1)<---------YAB1             <-------TEIL    - <---------ANAC58  --------->AHL20(2)<---------TOE2(3) --------->YAB1             <---------GLK1(2)<-   atgccttgccttctataacaaattattttcttaaacatttagatttcctttgtactaaaatgattctgatagtaatagaatatagattcacaatttatgt  19575700  Previous    Next  AGI:  At3g52780.1    Description:  ATPAP20/PAP20; acid phosphatase/ protein serine/threonine phosphatase. similar to ATPAP22/PAP22 (purple acid phosphatase 22), acid phosphatase/ protein serine/threonine phosphatase [Arabidopsis thaliana] (TAIR:AT3G52820.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO15928.1); contains InterPro domain Metallophosphoesterase; (InterPro:IPR004843); contains InterPro domain Purple acid phosphatase-like, N-terminal; (InterPro:IPR008963) Range:  from: 19572305    to: 19575173    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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