Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       --------->YAB1                                                                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                    --------->MYB46(3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                                                                   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                 <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                <-------TEIL <-----------GT1                                                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                             <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                          <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                         <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                         <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    <---------AHL20(2)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                 --------->AHL20(2)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                 <---------AHL20(2)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                              --------->YAB1   <---------YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              --------->AHL20(2) --------->AHL20(1)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)    <-----------GT1           --------->AHL20(2)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2) <---------REM1(1)       --------->AHL20(2) <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) ------TOE2(3)<---------AHL20(2) <---------AHL20(1)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----->DOF2  --------->YAB1--------->YAB1  --------->AHL20(2)<XXXXXXXXXXXXXXXXXXXXMIR862-3P   aagttgtaacccctattaaaacagcatattaataatattttaaaattttataaatattgattcaaatacatccaccatataacccaattacaaaataaaa  7995100                          <---------MYB52(1)                         --------->LBD16                        xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                        <---------O2                        --------->ANAC55(2)                        <---------ANAC46                        <---------ANAC55(2)                        --------->O2                      ------------->DYT1                      --------->SPL7                    <-----------HVH21                   --------->ANAC46                 xxxxxxxxxxxxxxxx>smallRNA(i)               <-----------GT1         ---------->DOF2              xxxxxxxxxxxxxxxx>smallRNA(i)             xxxxxxxxxxxxxxxx>smallRNA(i)             <----------DOF2   <---------AHL20(2)--------->ICU4       ---------->DOF2            xxxxxxxxxxxxxxxx>smallRNA(s)    ----------->GT1   <---------TOE2(3)         <---------YAB1            xxxxxxxxxxxxxxxx>smallRNA(i)<---------TOE2(3)  --------->AHL20(2)       --------->AHL20(2)   ctcgttctataatttctttacccgtcccgtgattttttttttaaagtagtaatttttaaaatttaagaatataaaagttttgcaaattatatcattctct  7995200                                                                                        <xxxxxxxxxxxx                                                                                xxxxxxxxxxxxxxxxxxxxx                                                                                --------->ATHB12                                                                               xxxxxxxxxxxxxxxxxxxxxx                                                                           <---------TOE2(3)                      <-----------GT1                                --------------->AGL15            <---------------AGL15                                    ================================            =========================================================================MADS_MADS            --------------->AGL15  --------->ANAC58                  <---------------AGL15           <---------AHL20(2)      --------->ANAC46                 <-----------------AGL2-----------     --------->AHL20(2)       --------------->AtSPL8            <----------DOF2xxxxxxxxxxxxxxxxxxxxxx     --------->YAB1----------->GT1 --------->ANAC58            <---------ICU4  <---------YAB1     <---------AHL20(2)  --------->TOE2(3)                 <---------AHL20(2)<------ZmHOX2a(1)    <--   aatacatttatattttatatatagtaacattatacataccccataacatttttggttttatataatcttttctaaattaggatgatttgatatgtttaat  7995300                                                                    <---------DAG2                  <                                                                    <----------DOF2                 <                                                                 <-----------GT1                    <                                                            <---------YAB1                         <-                            --------->ARR11(3)             --------->AHL20(1)                     <--                            <---------ARR11(3)             <---------AHL20(2)                     <xx                         <---------TOE2(3)                 <---------AHL20(1)                    <---                       --------->AHL20(2)                 <---------AHL20(2)                     xxxx                       <---------AHL20(2)                 --------->YAB1         xxxxxxxxxxxxxxxx>smallRNA(i)                   <---------AHL20(2)                     --------->AHL20(2)   <---------TOE2(3)-----              --------->AHL20(1)    <---------ANAC55(2)<---------ICU4        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <---------ZAT18 <---------AHL20(1)                 --------->AHL20(2)    <---------YAB1      ----- xxxxxxxxxxsmallRNA(si3)---------->DOF2               <---------AHL20(2)    <xxxxxxxxxxxxxxxxxxxsmallRNA(si3) x>smallRNA(l2)    --------->AHL20(1)                <---------AHL20(2)  <---------AHL20(2)     ----- x>smallRNA(si3)   --------->AHL20(2)           --------->At5g28300 --------------->AGL15       ----- ===================================================================================MADS_MADS   ----- >GT1         --------->AHL20(2)    --------->ANAC55(2)--------->YAB1    <---------YAB1        xxxxxx x>smallRNA(se3)--------->YAB1  <-----------GT1----------->GT1  <---------AHL20(2) <---------YAB1<--- -------YAB1 --------->YAB1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)<-----------GT1xxxxxxxxxxxxxxxxxxxxxx   attagtggtcttaaaaaataataaattaaagatttaacccgtattgaaacggtatattaattatatttaactttttttattaatgttgattcaaaaaccc  7995400         <xxxxxxxxxxxxxxxxsmallRNA(s)        <xxxxxxxxxxxxxxxxsmallRNA(s)       <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)       <---------ARR14(2)       --------->ARR14(2)       xxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <xxxxxxxxxxxxxxxxsmallRNA(s)  <xxxxxxxxxxxxxxxxsmallRNA(s)                   --------->AHL20(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)           <---------AHL20(2) --------->ANAC58                            <---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)        <---------AHL20(2) --------->ANAC58                         --------->TOE2(3) xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <---------YAB1 xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   <---------TOE2(3) xxxxxxxxxxxxxxxxsmallRNA(i)      <---------AHL20(2) --------ALFIN1                   <---------AHL20(1)             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) -------MYB52(1)              --------->AHL20(2) --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->AHL20(1)     --------->AHL20(2) --------HVH21               --------->AHL20(2) <---------AHL20(2) xxxxxxxxxxxxxxxxxx>smallRNA(se3) --------->AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---->bZIP60(2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) ---->ANAC55(1)        --------->ANAC58<---------AHL20(2)<---------AHL20(2)                   <xxxxxx ---->ANAC46           --------->ANAC58--------->AHL20(2)--------->YAB1       --------->TOE2(3)    -- ---->ANAC58          --------->DAG2   --------->YAB1 --------->YAB1      <---------YAB1      xxxxxxx ---->ANAC58         ---------->DOF2 <---------YAB1 <---------YAB1       --------->AHL20(2)  xxxxxxxx xxxxxxxxxxxxxxxx>smallRNA(l2)<---------AHL20(2)--------->AHL20(2)      --------->YAB1    <---------At4g35610 --------TGA1  <xxxxxxxxxxxxxxxxsmallRNA(i) --------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)-- >smallRNA(i2)<xxxxxxxxxxxxxxxxsmallRNA(i)--------->YAB1<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)*TSS<xxx   gtcactccaaatccgtcttgccaaaaagccatttattttattaatattaattttattaataatatgactctgaattataatctaaacattttagctaata  7995500                                              xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                      xxxxxxxxxxxxxxxx>smallRNA(s)                                      <xxxxxxxxxxxxxxxxxxsmallRNA(le3)                                      <xxxxxxxxxxxxxxxxsmallRNA(i)                                      <xxxxxxxxxxxxxxxxsmallRNA(s)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                   ------->TEIL                                  <-----------GT1                                  <xxxxxxxxxxxxxxxxsmallRNA(s)                                  <xxxxxxxxxxxxxxxxsmallRNA(i)                                 <xxxxxxxxxxxxxxxxsmallRNA(s)                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                 <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                --------->HSFB2a(1)                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                <---------HSFB2a(1)                                xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                xxxxxxxxxxxxxxxxxx>smallRNA(fl3)                                <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                               --------------->AtSPL8                               <---------KAN4(2) --------->ARR14(2)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                               ---------->TaMYB80<---------ARR14(2)                              <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                              <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                             xxxxxxxxxxxxxxxx>smallRNA(s)                             xxxxxxxxxxxxxxxx>smallRNA(i)                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                           <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)       <xxxxxxxxxxxxxxxxsmallRNA(i) <                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                          xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)        <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <xxxxxxxxxxxxxxxxsmallRNA(s)   x                      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         <xxxxxxxxxxxxxxxxsmallRNA(s)   <x                      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)         --------->ARR14(2)               <xx                     <---------AHL20(2)  ----------->HVH21       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <---------ARR14(2)            xxxxxx                   xxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<------                   <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)   <---------DAG2<xxxxxxxxxxxxxxxxsmallRNA(i) <--               --------->AHL20(2)xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(i)  xxx             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)     <----------DOF2<xxxxxxxxxxxxxxxxsmallRNA(s)xxx       <---------ZAT14xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <---------ARR14(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)     --------->AtLEC2<xx   <------ZmHOX2a(1)--------->AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) ---------->DOF2    -------  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)--------->AtMYB61--------->YAB1 xxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ------->TOE2(2) <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)<xxxxxxxxxxxxxxxxsmallRNA(i)x xxxxxxxxx>smallRNA(le3)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)x xxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxx>smallRNA(s)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxx ------->TOE1(2)<---------YAB1xxxxxxxxxxxxxxxxx>smallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<x xxxxxxxxxxxxxxxxxxxsmallRNA(i2)<xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   acataggagtataccatttttatttaataggggaatgtaccatatgacccgaatacacttttacccaaatccaccaaaaaagtcttgcaaaaatagtata  7995600                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                          <------MYB83                          <------MYB46(1)                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                        xxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                       xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(s2)                     <---------YAB1                <---------DEAR3(2)                <------MYB83                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                <------MYB46(1)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)             xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)            <xxxxxxxxxxxxxxxxsmallRNA(i)           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)         <xxxxxxxxxxxxxxxxsmallRNA(i)        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       xxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)       xxxxxxxxxxxxxxxx>smallRNA(i)     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)   --------->ANAC58xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   --------->ANAC58xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) --------->CCA1(2)<xxxxxxxxxxxxxxxxsmallRNA(i)          --------------->AGL15 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                   <---------------AGL15 xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                   --------->TOE1(3) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                 --------->At4g35610 xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   <---------At4g35610 xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         --------->AHL20(1) xxxxxxxxxxxxxxxxx>smallRNA(le3)<---------TOE2(3)  <---------MYB52(1) ---ZAT14<xxxxxxxxxxxxxxxxsmallRNA(s)       <---------AHL20(2) -------ZAT6xxxxxxxxxxxxxxxxxxx>smallRNA(se3)    xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) xxxxxxxxxxxxxxxxxxxx>smallRNA(se3)         --------->AHL20(2)                                    <-- xxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          <---------AHL20(1)                                  <xxxx xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <---------ARR11(3)    <---------AHL20(2)          <xxxxxx -->ZAT14xxxxxxxxxxxxxxxx>smallRNA(i)       --------->ARR11(3)    --------->AHL20(2)         <------- xxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        --------->AHL20(2)  ----------->GT1               xxxxxxxx xxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)   <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)             ----------->GT1 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)            --------->DAG2 xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)             ---------->DOF2<--   gagataagaaacgatagtcggttttgataggtataagattagcaaatatattagttagcttaaattagttaaataatacaaattgaaaaggtatattaca  7995700                                                                                      --------->ANAC55(2)                                                                                  <---------AHL20(2)                                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <-                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   --   <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)  --- --------DOF2                                              xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)----- xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                        <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <------ xxxxxxxxxxxxxxxxxsmallRNA(si3)                    <---------YAB1           xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) ----GT1xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)      <---------AHL20(2)      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) xxxxxxxxxxxxxx>smallRNA(si3)               --------->AHL20(2)   <---------DAG2  <---------ICU4 <---- -------DAG2    --------->YAB1              <---------AHL20(2)   <----------DOF2--------->ICU4<------   ctttattcgaatatagtatcaaaacttatataacacatagatttgataaatttttaattgttgaatacttttttttgtgctaatttttatgtgattaaga  7995800                                                                                    xxxxxxxxxxxxxxxxx                                                                                    xxxxxxxxxxxxxxxxx                                                                                  xxxxxxxxxxxxxxxxxxx                                                                                  <xxxxxxxxxxxxxxxxxx                                                                             xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                          <-----------GT1                                                                       xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                          <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)           --------->AHL20(2)                           <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)          --------->AHL20(2)                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)        <---------ARR11(3)                         <---------ANAC46   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <---------TOE1(3)                            xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <-----      <---------TOE2(3)                            <-------GAMYB     <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   --------->AHL20(2)                    --------->AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)<xxx   <---------AHL20(2)                  ----------->GT1  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   <----- --------AHL20(2)                    ---------->DOF2 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)       <----- ------->AHL20(2)              <---------AHL20(2) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)        <xxxxx ------>AHL20(2)               <---------AHL20(1) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)         <xxxxx ---->ARR11(3)                 --------->AHL20(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  <---------ZAT6 ---YAB1--------->ARR11(3)  --------->AHL20(2)    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  <xxxxxxxxxxx -----ARR11(3)<---------WOX13(1)    <---------AHL20(2)<xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)   xxxxxxxx ---TOE2(3)<---------AHL20(2)  --------->AHL20(2) xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------ANAC46   tttaatttaagatttaattgattttgtatataaaatattaaaagtaaattgtgagttgtatatgttttgttgatattatctatattgtttagtgtttaag  7995900                                                                              <---------MYB52(1)                                                                             --------->LBD16                                                                             <-----------HVH21                                                                         <xxxxxxxxxxxxxxxxsmallRNA(s)                                                                         <xxxxxxxxxxxxxxxxsmallRNA(i)                                                                       xxxxxxxxxxxxxxxx>smallRNA(s)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                               <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                     xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                   <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                   xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(l2)                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                         <---------AHL20(2)     <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                         xxxxxxxxxxxxxxxx>smallRNA(le3)      <---------YAB1 --------->ANAC46                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2) xxxxxx>smallRNA(l2)     --------->AHL20(2)     <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) xxxxx>smallRNA(l2)   <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) x>smallRNA(l2)  <---------WOX13(1)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) xxxxxsmallRNA(i2)----------->GT1              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ----TOE2(3)    >>>>>>>>>ARR2                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3) xxxxxxxxxxxxxxxxxxxsmallRNA(le3)              <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                x ----YAB1      --------->ATHB12                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)             <--- ----TOE1(3)  <---------YAB1                  <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)             ---- xxxxxxxxxxxxxxxxxxsmallRNA(si3)             <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)            <-------- xxxxxxxxxxxxxxxxxxsmallRNA(i2)              <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <-----------GT1x xxxxxxxxxxxxsmallRNA(si3)                 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)    --------->TOE1(2) xxxxxxxxxxxxxxx>smallRNA(si3)  xxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  xxxxxxxxxxxxxxxx>smallRNA(i) xx   attatacacttgtagtttgattgttaatttaagagtttcacatgtagtataccatcttgtattaatatcgatctaaacccgtcaattctacgattttcca  7996000  Previous    Next  AGI:  At3g22555.1    Description:  pseudogene, putative DNA methyltransferase Range:  from: 7995493    to: 7996643    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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