Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------YAB1                                               --------->ANAC46                                               --------->ANAC58                                               --------->ANAC58  --------->YAB1                         ------>MYB83                               ----------->GT1 ---AHL20(2)                             ------>MYB46(1)                            <------MYB46(1) -->AHL20(2)                           --------->TOE2(3)                            <------MYB83 ->AHL20(2)                            <---------MYB59---------->DOF2--------->AHL20(2)    --------->TOE2(3) -----AGL15                           --------->ANAC55(2)     ----------->GT1   --------->ATHB12 ---->AGL15    <---------ANAC46       <---------ANAC55(2)   ----------->GT1    <---------YAB1   tgaaaaataactcaatagtgtgtatgctcagcaatggaatacctaattcaagtcattaaagagagagaaaaaaaaatcacgacgattggtaaatgttaat  3068800                                                                                             <-------                                                                                             <-------                                                                                             --------                                                                                  <---------ZAT2                                <---------TOE2(3)                            <---------DOF5.7(2)                             <---------MYB52(1)                          <---------MYB46(3)--------->LBD16                        --------->MYB52(1)                        ----------->RAV1(2)    <---------LBD16                        <---------At5g28300                       --------->ZAT2  --------->At4g35610                   --------->AHL20(1)           --------->MYB52(1)<---------ZAT2  --------->ZAT2                   --------->AHL20(2)<------MYB46(1)              <---------At4g35610    <---------At4g35610                   <---------AHL20(2)<---------MYB46(3)           --------->At4g35610 ----------->HVH21                  <---------AHL20(2) <------MYB83            ----------->HVH21    <---------At4g35610                  --------->AHL20(2)--------->MYB59        --------->ANAC46--------->DOF5.7(2)    <--  --------->MYB52(1)   <-----------GT1         ----------->HVH21<-----------RAV1(2)  <-----------HVH21   ggaccaatggaaaaccagaattaaattaccggttaagtttggttcggaattgacggtttagacgggacagctgagttgttaacgagctgtcaccggattc  3068900                                                       <---------ICU4                                              ----------->GT1                                        <------ZmHOX2a(2)                                        --------->CCA1(2)     --------->GLK1(2)                                       <---------ARR11(3)    <---------ARR14(2)                                       --------->ARR14(2)    --------->ARR14(2)                                       --------->ARR11(3)  ----------->ARR10                                   ---------->DOF2     --------->YAB1   ----------->HVH21    <---------At4g35610--------->MYB52(1)<---------GLK1(2)  <-----------HVH21   --------->REM1(1)<---------ARR14(2) --------->YAB1           <----------DOF2 --GLK1(2)<---------MYB52(1)     --------->YAB1--------->At5g28300                 <---------DAG2 --ARR14(2)        --------->TOE2(3)   --------->AGP1 --------->ICU4            ------>ZmHOX2a(1) ->ARR14(2)    <---------ANAC58  <---------AHL20(2) --------->YAB1      <----------DOF2  <---------YAB1 -------LBD16  <---------ANAC58  --------->AHL20(2)<---------YAB1       <---------DAG2 <---------AHL20(2)   tacgggtcacccgttttgcttccttcatcagataataaaaagatccaacggttacaataatcagattctcttccctttattcctactttttatttttgat  3069000                                                 ----------->GT1                                                 <------MYB83                                                 --------->ANAC55(2)                                                 <---------ANAC55(2)                                                --------->MYB46(2)                                                --------->MYB59                                               <---------MYB55(1)                                              <---------MYB52(1)                                             <-------GAMYB                                            <---------MYB46(3)                                         ------------>AtMYB77                                      <------MYB46(1)                                   <-------GAMYB--------->MYB111(1)                                  <---------MYB46(3)                 <----------DOF2                                  --------->MYB52(2)                --------->TOE2(3)                                  --------->MYB111(2)               <---------DAG2                           <-----------GT1<------NtERF2       ------>MYB83                      <----                       <----------DOF2<------MYB83            ------>MYB46(1)               <--------                    ------->TEIL  --------->MYB55(2)        <---------MYB59          <---------MYB52(1)                    <---------ARR11(3)<---------MYB46(3)   --------->ANAC55(2)   <---------ANAC46                    <---------ARR11(1)--------->MYB52(2)   --------->ANAC46      <---------ANAC58              <---------ALFIN1 <---------MYB46(3)<------MYB46(1) <-----------GT1 <---------ANAC58   <----------DOF2 <---------CCA1(2) <---------AtMYB61   <-----------GT1       <-----------GT1 ------   tttttctttaaaaccctcactgtatctttttatcggttgttggtggcagttaggtaatttcacctaataacctttttttttttgcctgttatctcttttt  3069100                             <---------AHL20(2)                            --------->AHL20(2)                           <---------YAB1                        <---------YAB1                        --------->ICU4                      -------->ATHB1                      <---------AHL20(2)                      -------->HAHB4                      <---------ICU4                      --------->ATHB51                      <--------HAHB4                      --------->YAB1                     --------->ICU4                     <---------YAB1                                            <---------HSFB2a(2)                     <---------ATHB51                                          --------->HSFC1(1)                  <---------AHL20(2)                                           <---------HSFC1(1)                  --------->AHL20(2)                               <---------AHL20(2)                  <---------YAB1                                  --------->ARR11(3)                <            <---------AHL20(2)                                    --------->AHL20(2)                -            <---------ARR11(3)                                    <---------ARR11(3)            <----            --------->ARR11(3)                                    <---------AHL20(2)           ------            <---------AHL20(1)                                    --------->AHL20(1)           <-----  <-------TEIL   --------->AHL20(2)                               <---------AHL20(1)          ------- <-----------GT1 <---------AHL20(2)                           <---------AHL20(2)--------->LBD16<----- -------GT1 --------->AHL20(2)           <---------MYB52(1)  --------->AHL20(2)--------->HSFB2a(2)<-- --DOF2     --------->AHL20(1)  --------->DAG2     <---------AHL20(2)         <---------LBD16-------- --->AHL20(2)<---------AHL20(2)---------->DOF2     --------->AHL20(2)<---------AHL20(2) ----------->GT1   aatatacgtttcaatatattttaattattattaaaaagttcccgttatacgaataaaatagcatttaatatatttttgtttctggaaaatgtgtaattat  3069200    <---------AHL20(2)    --------->AHL20(2) -----------TBP -------->AHL20(2) -----YAB1 --->ARR11(3) ----ARR11(3)        --------->ZAT14                  <---------MYB52(1) -->YAB1             <---------ZAT18            --------->At4g35610 ------GT1           <---------ZAT14            <---------At4g35610 --------DOF2        --------->ZAT18*TSS ---------->DOF2--------->MYB59----------->RAV1(1) ->ICU4    <-------TEIL       <---------LBD16---------->DOF2   <-----------GT1  --------->GLK1(2)   ctttatataaatgttcatatcagagcactatttctgggtttcaaaaagaaagctcagttagctattttctctaccacagaagaatctagacccagagaga  3069300                                                                                                    <                                                                                                 ----                                                                                               ------                                                                                               ------                                                                                               <-----                                                                                              ------>NtERF2                                                                                              <------                                                                                             ------->GAMYB                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                                                                           ------>NtERF2                                                                                           --------->At4g35610                                                                                           <---------At4g35610                                                                                           <---------ATERF1(1)                                                                                           <---------ZAT2                                                                                           --------->ZAT2                                                                                     <-----------HVH21                                                                                    --------->TGA1a <                                                                                    <---------bZIP60(2)                                                                                    =================MYC_MYB                                                                                    <---------O2-----                                                                                    <---------TGA1a<-                                                                         --------->ANAC46 --------->DEAR3(1)                                                                         --------->ANAC58<-----------RAV1(2)                                                            <---------REM1(1)       --------->bZIP60(1)                                                --------->GLK1(1)     <-------TEIL  --------->bZIP60(2)                                                <---------GLK1(1)  --------->At4g35610  <---------ATERF1(1)                   ================================HOX2a_HOX2a     --------->GLK1(1)--------->O2-----                   <------ZmHOX2a(2)        <------ZmHOX2a(1)    <------ZmHOX2a(1)  <---------bZIP60(1)                 <---------GLK1(1)  ---------->DOF2      --------->ICU4  --------->ANAC58--------->ATERF1(1)   gagagagagagagagagagagatcagtaacgagagagtcaaagagaggagatttcagtgaagatgaaggagatgcaggcaatagagacgtcgcagccgac  3069400            <---------ATERF1(1)         ------>NtERF2       <------NtERF2       --------->ATERF1(1)       <---------LBD16      <---------ATERF1(1)     --------->ARR14(2)     <---------PCF2     <---------ARR14(2)    --------->ATERF1(1)    <------NtERF2   <---------ATERF1(1)   ------>NtERF2   --------->ABI4(2)   <---------MYB46(3)  --------->ALFIN1  <---------DEAR3(1)   <---------RAP2.6(3) ---------MYB46(3)     ------>NtERF2 -->NtERF2  <---------ORA47(2)                <------NtERF2 --->ATERF1(1)        <---------ETT(1)       <---------HSFB2a(2) --->SPL7--------->LBD16                     xxxxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) -NtERF2<---------DEAR3(1)                   --------->HSFB2a(2) ---ATERF1(1)<------NtERF2                  <---------LBD16 --->HVH21  <---------MYB46(3)              <---------ANAC46 ->DEAR3(1) <---------DEAR3(2)         --------->At4g35610                                         << >ATERF1(1) <---------DEAR4(2)         <---------At4g35610                                         -- >RAP2.3(1)--------->ALFIN1       --------->At4g35610                                           ----- >DEAR3(2) <---------DEAR3(1)     --------->ZAT2                 --------->At4g35610            <---- >MYB46(3)<---------ABI4(1)       <---------GLK1(1)             --------->RAP2.6(2)             ----- ---------DEAR3(2)    --------->RAP2.6(2)   --------->ETT(1)  <---------ZAT2                    <---- ------>HVH21--------->At5g28300  <---------ZAT2              --------->ZAT2            <------ZmHOX2a(1) --------DEAR3(1)     --------->DEAR3(1) <---------MYB46(3)   <---------At4g35610 <---------At4g35610 ---->DEAR3(1) <-------TEIL       <---------At4g35610         --------->At4g35610 --------->At4g35610   gacggtggctccggcggtgcatagccgacaattgggagctcagttgtcgggaagtatgagtttcagcagccaaatgtcgaaggaagatgaggagatgtct  3069500         <---------At4g35610                                                                <--------         --------->At4g35610                                                           <---------ANAC58      <---------MYB52(1)                                                               <---------ANAC58     <----------DOF2                                                                <------MYB83 <<<<<ZML2   <---------ANAC46                                                    -------------------- ------->ARR14(2)                                                               <---------ZAT2 ---->HSFB2a(2)                              >>>>>>>>>TBF1                      --------->ZAT2 -----HSFB2a(2)                        --------->HSFB2a(2)                      <---------At4g35610 ---->HSFC1(1)          ---------->DOF2<---------HSFB2a(2)             <-------TEIL <------MYB46(1) -----HSFC1(1)  --------->REM1(2)    <------ZmHOX2a(2)          ---------->DOF2 --------->At4g35610   agaactgcgttatctgcgtttagagcgaaagaagaagagatcgagaagaagaagatggagattagggaaagggttcaagctcagcttggtcgtgtcgaag  3069600                            <---------ANAC46                         <---------MYB52(1)                        --------->LBD16                        <-----------HVH21                       <---------ANAC46                       <---------ANAC55(1)                       --------->ANAC55(2)                       <---------ANAC55(2)                       <---------ANAC58                       <---------ANAC58                      ------>ZmHOX2a(2)                  ----------->ARR10                <----------DOF2             <---------MYB46(3)      <---------GLK1(2) -ANAC46       <---------ANAC58    ------->TEIL                 ---------->DOF2 ->WRI1        <---------ANAC58   <---------CCA1(2)       <---------AHL20(2)                  <------   aagagactaagcgtcttgctttgatccgtgaggtatgtatctatattggttatttcatatataaaaaaaagattgttttttttttggagaattgtgcttc  3069700  Previous    Next  AGI:  At3g09980.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G03660.1); similar to unknown [Populus trichocarpa] (GB:ABK95581.1); similar to unknown [Populus trichocarpa] (GB:ABK93998.1); contains InterPro domain Protein of unknown function DUF662 (InterPro:IPR007033) Range:  from: 3069236    to: 3071434    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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