Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <---------ICU4       <---------ATHB12       --------->ICU4     <---------GLK1(1)     --------->GLK1(1)   <------ZmHOX2a(1)  --------->ANAC58  --------->ANAC58                             --------->GLK1(2) -----------RAV1(2)                           <---------GLK1(2) -------->RAV1(1)                             <---------ARR14(2) ----->ZAT18      <<<<<<<ZML2                 --------->ARR14(2)            <---------At5g28300 ->NtERF2      <---------HSFC1(1)         --------->At4g35610              <-----------GT1 --->bZIP60(1) <---------HSFB2a(2)    <---------ARR14(2)              <---------YAB1            ----- ----bZIP60(1) --------->HSFB2a(2)    --------->ARR14(2)            <---------At4g35610         <---- >ALFIN1--------->YAB1            --------->YAB1                 ------>ZmHOX2a(1)         <---------GLK1(1)   ccacaggaaatcattatctagaaccagactatgaaatcaaaatcggcagaatctctgaacaaaattcctcttctgattcaccatggccactggaaatcgt  15029500                                                                                                  <--                                                                                                  ---                                                                                         ----------->GT1                                                                                        --------->DAG2                                                                                       --------->DAG2                                                                                      ---------->DOF2                                                                                   --------------->AGL15                                                                                   ==================          --------->SPL7                                                          ----------------->AG       ------->GAMYB                               --------->MYB52(1)             <---------------AGL15      --------------->AtSPL3                      <---------ARR14(2)              ----------------->AGL1   --------->MYB46(3)                   <---------At4g35610                      ==================== ---->DOF5.7(2)                 ------->TEIL ---------->DOF2                     <-----------------AGL1 -----MYB52(1)      --------->YAB1      --------->At4g35610  ---------->DOF2     <-----------------AG   tatctacaaccgtactatgaaatcaaaatccatgaatctctcagctaaaaaggaaacggagaagaaagagtagtgtcttcaattaccaaaaaggtaacaa  15029600                   <---------YAB1                  <-------GAMYB               <-------GAMYB              <---------MYB46(3)             <---------AtMYB61         <---------ANAC46         <---------ANAC58         <---------ANAC58       ------>NtERF2    --------->At4g35610    <---------ANAC58    <---------ANAC58                                                        <---------ZAT6    <---------At4g35610          <---------------AGL15                    <---------ANAC46   <---------MYB46(3)  <-----------GT1  ----------->GT1                 <---------ZAT14 -------ARR11(3) <---------MYB46(3)---------->DOF2                 <---------ANAC46              ---- ------>ARR11(3)<--------P--------->ARR11(3)---------->DOF2        <---------bZIP60(2)          <---- ================================================MADS_MADS       --------->ZAT14                <---- ================================================MADS_MADS       <---------ZAT14              -------   gatgttggctgccttgtggttgttattacatcttgacaaaagaagtaaaagaagtgtatagacacagtgatgtgtttagtgtgagtctagtatcagtaat  15029700                                ----------->HVH21                                <---------ATHB12                             --------->AtMYB61                             <---------ALFIN1                         --------->MYB46(3)                        <---------ATERF1(1)                        --------->At4g35610                       --------->RAP2.6(2)                     <---------ZAT2                     --------->At4g35610                     --------->ZAT2<---------WOX13(1)   --------->YAB1                     <---------At4g35610             --------->WOX13(1) ----->YAB1--------->ANAC58 --------->MYB46(3)      --------->AHL20(2) -----ATHB12        --------->ANAC46                <---------AHL20(2)       <-----------ARR10    <-- -----YAB1 --------->ANAC58------>NtERF2           --------->AHL20(2)       <---------CCA1(2)     --- -->YAB1   ----------->GT1--------->RAP2.6(2)----------->GT1      ----------->GT1    ----------->RAV1(1)   catacaagaatgcaagtaaaaccagcagccaccactgatggataaccttgtaaattaatcaaacttgatagtgaaatcaaatctctgcaacaaattggca  15029800                                           <---------ALFIN1               <---------YAB1           --------->AtMYB61     <-----------GT1         <---------ALFIN1          ------>ZmHOX2a(1)          --------->AtMYB61     <---------GLK1(1)       --------->WOX13(1) -------ARR14(2)      ---------->DOF2<---------ALFIN1     --------->ARR11(3)      <-------TEIL ------>ARR14(2)  <---------YAB1  --------->ANAC46        <---------ARR11(3)  <---------ATHB12   gaaccaaaactcctaatatgatgagaaagcctttcaacaccacctccactcttctctatagatatcaccttcacattccaaacatccatcaccttcacat  15029900                                                                           --------->ANAC46                                                                           --------->ANAC58                                                                           --------->ANAC58                                                                         --------->ZAT6                                                                      ===============================                                                                      ===============================                            --------->ATHB12                     <---------ZAT2            --------->HSFC1(2)                 <---------TOE2(3)                              --------->ANAC58     <------------CBF                --------->YAB1                                  ------>MYB83       <---------YAB1             --------->TOE2(3)<---------WOX13(1)    <------------CBF  ------>ZmHOX2a(1)    <---------HSFC1(2)    --------->TOE2(3)   ------->TEIL          --------->ANAC46  --------->ANAC58--------->GLK1(2)   -    --------->TOE1(3) --------->YAB1    <---------AtLEC2        ------>MYB46(1)<---------GLK1(2)   <-   ttgaaaccttgaatacattaacaatgaaactgattggagtttgcatagacacaacattgttagaccaagctcctaacacgagattctaattgaagtttcc  15030000                                                                                                  ---                                                                                        ----------->GT1                                                                                        <---------ANAC55(2)      >>>>>>>>>RAP2.2                                                                   --------->O2      --------->YAB1                                    --------->ICU4                  <---------TGA1a      --------->TOE2(3) <---------GLK1(1)               <---------YAB1                  <---------O2 ------------>CBF    --------->ANAC58                 --------->YAB1                    ============= ======HOX2a_HOX2a   --------->ANAC58                --------->ICU4                     <---------ANAC46 =====HOX2a_HOX2a--------->ANAC58                  --------->YAB1                      <------------- ----->ZmHOX2a(2)--------->ANAC58 ------------>CBF--------->ICU4  ------------>CBF ---------->DOF2--- -----ZmHOX2a(2) --------->ANAC46 --------->AHL20(2) <---------YAB1                ===============bZIP_DOF   gatctcaatctaaattcacaagtaagaaaccccaaattcaatatgcgaatgaatgatgatgatttttcttcaattcccaaaactaaaaagacgtgaaaaa  15030100                                                     ----------->GT1                                                    --------->ANAC58                                                    --------->ANAC58                                                    --------->ANAC46                                                 <---------SPL7                                                 --------->ZAT14                                                 <---------ZAT14                                                --------->ALFIN1                                               <---------------AtSPL3                                               <---------------AtSPL8                                              <---------ANAC58                                              <---------ANAC46                     <---------ANAC58                                              <---------ANAC58                     <---------ANAC58                                    --------->DAG2 <---------LBD16    ------>ZmHOX2a(2)                             ---------->DOF2<------MYB46(1) --------->ATHB12 <---------ANAC58           ---------->DOF2 --------->ANAC46 <------MYB83    <---------ICU4   <---------ANAC58 ------>TOE2(3)            --------->ANAC58<---------AtMYB61-------->ATHB1=========================== =====================bZIP_DOF     ---------->DOF2 --------->SPL7   <---------ARR14(2) ----------TaNAC69(2)      --------->ANAC58<---------MYB46(3)       --------->ARR14(2) ------>TOE1(3)        --------->CCA1(2)--------->ATHB12   <---------YAB1 <----------DOF2   ccctaacaagtccgaaagttagaagaaacacgaaagagaaagcgattggtgtgtacggaaaatcattggggatcgtctttcttgggcttgcgatagttct  15030200       <---------ANAC58       <---------ANAC58    <-------MYC4    <-------MYC2    ------->PIF5    ------->PIF4                         --------->HSFB2a(2)    <-------PIF4               <------MYB83    <-------MYC3               <---------MYB46(3)    ------->MYC3               <------MYB46(1)    <-------PIF5           <-----------RAV1(1)    ------->MYC4          <---------MYB52(1)--------->ARR14(2)    ------->MYC2------>NtERF2<--------P  <---------ANAC46                     --------->ANAC58   <---------TGA1a      <---------DEAR3(1)--------->LBD16                     --------->ANAC46   ===================================MYC_MYB         --------->HSFB2a(1)     --------->ANAC58   --------->TGA1a<---------bZIP60(2)   <---------LBD16                    --------->ZAT18   --------->O2--------->DEAR3(1)      --------->MYB52(1)                  --------->ZAT14   <---------O2----------->HVH21    --------->At4g35610                    <---------ZAT18 <---------ALFIN1 <---------O2<---------AtMYB61       <---------HSFB2a(1)  <-------TEIL <------------OsbHLH66 <---------ORA47(1)<---------HSFB2a(2)     <---------ANAC58                  <- --------------------->WRI1--------->ALFIN1 <---------ARR14(2)   <---------ANAC58               <---- ============bZIP_DOF ------>NtERF2 <---------At4g35610       <---------AGP1<---------ALFIN1------>ZmHOX2a(2)   cttccacgtgcttagcgacgacgaggccggtgttggtgagcttccggatattgggaacgttgtagttctgtgccaagtacaccccaaaaactgatcccgt  15030300                        <-----------GT1                      --------->KAN4(2)                                                          ----                     --------->KAN4(1)                                                          -----                     <---------KAN4(1)                                                          -----            <---------HSFC1(2)                                                                  -----            <---------At4g35610                                                                <-----            --------->HSFC1(2)                                                                ------>ZmHOX2a(1)            --------->At4g35610                                                              <------- ---------->DOF2     <----------TaMYB80     <----------DOF2                                ------>ZmHOX2a(1) --------YAB1<---------GLK1(2)  ------>ZmHOX2a(1)                                     <---------GLK1(1) -----MYB52(1) --------->At4g35610   ------>ZmHOX2a(2)                                --------->GLK1(1)   tatgaaagagaagcagcttctgaatattcccatcctcgatctctctctttctctctctgtctctgtctctgtctctctgcaacttcagaactcctcctcc  15030400  Previous    Next  AGI:  At2g35733.1    Description:  unknown protein Range:  from: 15029755    to: 15029946    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g35736.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G25225.1); similar to unknown [Picea sitchensis] (GB:ABK20880.1) Range:  from: 15030163    to: 15030333    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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