Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                       <---------ZAT14                     --------->ZAT14              --------->TGA2(2)             <-----------HVH21                                                        <---------ANAC58            <---------TGA1a                                                           <---------ANAC58            <---------bZIP60(1)                                                   --------->ATERF1(1)            --------->bZIP60(1)                                                  <---------ATERF1(1)            --------->TGA1a                                                      ------>NtERF2            --------->TGA2(1)                                            <---------YAB1            <---------TGA2(1)                                            --------->ICU4            --------->bZIP60(2)    <---------ZAT14                     --------------->AGL15            =============================bZIP_DOF                     <-----------------AGL1            <---------O2           --------->ZAT14           <----------DOF2    <---------RAP2.6(2)            --------->ANAC58       <---------ZAT18        --------->GLK1(2) <---------WOX13(1)            --------->ANAC58       --------->ZAT18       <---------GLK1(2)--------->ATHB12   <------- --->YAB1   --------->O2      ---------->DOF2  --------->TOE2(3) <----------DOF2--------->ETT(2)    -   tggttcaatttgagacgtcagattgcagtgatcaaagtgaacttgctaacttcaatagagattctttctttttccatgattggcgactgcgtctcatatc  23176600                                                                       <---------AHL20(2)                                                                   -------->HAHB4                                                                   <--------HAHB4                                                                   <---------ICU4                                                                   --------->ATHB51                                                  <-----------TGA1 --------->YAB1              --------->TGA1a                     <-----------HVH21<---------AHL20(2)              --------->O2                       <---------ANAC46  -------->ATHB1              <---------TGA1a                --------->At4g35610  --------->ICU4              <---------O2                   <---------At4g35610  <---------YAB1              <---------ANAC55(2)        <---------DAG2           <---------ATHB51        <----------   --------->ZAT6                    <---------ZAT18     <---------ARR11(3)        --------->ARR11(3) <-----------GT1      ----------->HVH21  <----------DOF2 --------->ARR11(3)        <---------ARR11(3) --CCA1(2)<-----------HVH21<---------ALFIN1 <-----------RAV1(1)<---------AHL20(2) --------->CCA1(1) -------->YAB1======================================bZIP_DOF   --------->AHL20(2) --------->RVE1(1)   atttatcactcttgtcatgtgagactgacacactcattgttcacttttgctgcgtcataaatcttttaattattaacttacaaaatatctcttaacaatt  23176700                                                                                <-----------GT1                                                                             <---------ICU4                                                                             <---------AHL20(2)                                                                            --------->AHL20(2)                                                  ----------->GT1           --------->ICU4                                                 --------->ANAC58      <----------DOF2    --------->WOX13(1)                           --------->ANAC58    --------->ZAT14 <------ZmHOX2a(1)  <---------ATHB12                               --------->ANAC46    --------->At4g35610        <----  --------->ICU4                             <---------ATHB12        <---------ZAT14<----------ID1 -GT1               --------->ATHB12     ------------>CBF        --------->ZAT6<---------YAB1   <----   tgaaatcattcaaaaacaagagtgatttgaatcaaactcttaatccaataaacgctaaaactctataacactgctgtatttattacaggacaaattttcc  23176800                      --------->ANAC55(2)                      --------->ANAC46                      <---------ANAC55(2)                 <--------ATHB1                 <------------ATHB5                 --------->ATHB12              --------->ANAC58                 <---------ICU4                --------->ANAC58                 --------->YAB1                ----------->HVH21           <---------AHL20(2)                <---------ATHB12               --------->ANAC46            --------->AHL20(2)                --------->ICU4   ----------->GT1          <---------MYB52(1)    <-----------GT1           <------ZmHOX2a(1)     <---------ANAC46 <-----------RAV1(2)      <---------YAB1 -----ANAC58    <---------YAB1   <---------ANAC55(2)   <-------TEIL   ------>ZmHOX2a(1) -----ANAC58------------>CBF    <-----------------------TaNAC69(2)<-----------GT1              ------   ttgaaaataagtaggacaatgattacgcagtagttaagtgaaaatgaacacgacaggtacgttgtgtttctccttatataattaacacatcgacatcatc  23176900                                                                                               <-----                                                                                               <-----                                                                                             <-------                                                                                             --------                                                                                             --------                                                                                            ---------                                                                                            <--------                                                                                         <-----------                                                                                         ------------                                                                                        -------------                                                                                        <------------                                                                                        -------------                                                                                        <------------                                                                                        <------------                                                                                     ------>ZmHOX2a(1)                                                                                    <---------MYB59                                                                                 <---------ARR14(2)                                                       <-----------GT1           --------->ARR14(2)                       --------->CCA1(2)          <---------AHL20(2)            <---------CCA1(2)                      <---------ARR11(3)          --------->AHL20(2)            <---------GLK1(1)  ---------->DOF2     --------->ARR11(1)     <---------ANAC55(2)              <---------ANAC55(2) --->At4g35610    ---------->DOF2            --------->ANAC55(2)              --------->ANAC55(2)   tccacaaagtctatatgaccaaaagatttgaaaacacttaaaaaatcacatattaattaacatgacacaaaaatcccattacatatcctaactaattatg  23177000                                 <-------MYC4                                 <-------MYC2                                 ------->MYC4                                 ------->MYC3                                 ------->MYC2                                 ------->PIF5                                            --------->ALFIN1                                 <-------PIF5                                           <-----------HVH21                                <---------PIF3(3)                                      <---------TGA1a                                <---------O2                                           --------->TGA1a                                <---------TGA1a                                        --------->O2                                <---------bZIP60(2)                     --------->At4g35610                                --------->PIF3(3)                       <---------At4g35610                                --------->TGA1a                         <---------ZAT2 <---------O2     ----------->GT1            --------->ANAC46                 <---------TGA1a       <---------ANAC46   --------->At4g35610        ------->GAMYB                      <---------O2        --------->LBD16  --------->ANAC46            <---------ALFIN1              --------->LBD16          ------>NtERF2 ----TOE2(3)                 --------->MYB46(3)            --------->RAP2.6(2)      <---------ALFIN1 ----YAB1                   ===============================================MYC_MYB  --------->DEAR3(1) --ICU4                     -------->P                    --------->ATERF1(1)      <---------LBD16 >HAHB4             <---------ALFIN1                     --------->At4g35610    <---------At4g35610 ->YAB1           -------->P==============MYC_MYB        --------->ZAT2 --------->ZAT2 ============== >ICU4--------->At5g28300--------->MYB46(3)             --------->DEAR3(1)      <---------ZAT2  <xxxx -ATHB51          ------>MYB46(1)<-------MYC3          --------->ATERF1(1)      --------->ZAT2  <---- ----AGL15        ========================MYC_MYB     <---------At4g35610       --------->At4g35610 --->AGL15        ------>MYB83=============================================MYC_MYB<---------ATERF1(1) ---->AGL2       ------>ZmHOX2a(1)--------->ALFIN1    --------->ZAT2  <---------RAP2.3(3)<---------MYB52(1) -----AGL2      <---------MYB111(2)                   --------->At4g35610       --------->GLK1(1) ---->AGL3    ------>ZmHOX2a(1) --------->O2    <---------ZAT2   ==================================== -----AGL3--------->ARR14(2)------>MYB83        --------->ZAT2   --------->O2  xxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -----AGL1<---------ARR14(2)------>MYB46(1)    --------->ALFIN1  --------->TGA1a<---------GLK1(1)   gtaccagcagtaaatcctcctaccacatccaaccacgtggcagtaatcggtgctggagcagccggactcgtggctgctcgagagctccgccgtgagggcc  23177100                                                                                                  ---                                                                                                 ----                   --------->ALFIN1                --------->ANAC46                              <---                  ------->MYC3                     --------->ANAC58                              ----                  <-------MYC3                     --------->ANAC58                              ----                  --------->TOE1(2)       --------->ZAT18                                        ----                  ------->MYC2           --------->ALFIN1                                        ----                 <---------TGA1a        --------->REM1(2)                                   <--------      <---------MYB52(1)               --------->ALFIN1                                    --------->DEAR3(2)     ======================MYC_MYB   <---------ANAC58               <---------ATERF1(1)<---------ETT(1)     <-------GAMYB<-------MYC2       <---------ANAC58           ------->TEIL           ----------->HVH21    <---------MYB46(3)    <---------ALFIN1<---------ZAT18    --------->WRKY12     --------->MYB46(3) <-----------RAV1(1)     --------->MYB46(3)     <---------REM1(2)   <---------ALFIN1  --------->MYB46(3) ============MYC_MYB   --------->PCF2<---------ANAC46  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)--------- xxxxxxxxxxxxxxxxxsmallRNA(se3)      <---------ANAC55(1)--------->MYB52(1)        --------->DEAR3(1) -----ALFIN1     --------->TGA1a  <---------DEAR3(1)  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)--------->MYB46(3) ============MYC_MYB  <---------PCF2<------NtERF2<---------ALFIN1  --------->ANAC46   --------->DEAR3(2)   actctgtcgttgttttcgaacgtgggaaccacatcggaggcgtgtgggcttacacgccaaacgttgaacccgacccccttagcatcgacccgacccgacc  23177200 ------>LBD16 ----->ANAC55(2) ------ANAC55(2) ----->ANAC58 ----->ANAC46                                                        <-----------------AGL1 ----->ANAC58                       <---------ICU4                  <-----------GT1 ----->ANAC55(1)      --------->ZAT14                             <---------GLK1(1) -ETT(1)         <---------ZAT14 --------->YAB1                   --------->GLK1(1) -->HVH21        --------->ZAT14--------->MYB46(3)          <-----------GT1                        <-   cgtaatccattcgagcctctacagttctctccgaaccatcatcccacaagaatgcatgggtttcactgatttcccgttttcgaccagactcgaaaacggg  23177300                     --------->bZIP60(2)        <---------HSFB2a(2)                  --------->TOE2(2)        --------->HSFB2a(2)                  --------->TOE1(2)        --------->LBD16                     ----------->RAV1(2)      ------>ZmHOX2a(2)             <---------ANAC58     <------ZmHOX2a(2)              <---------ANAC58     --------->CCA1(2)            --------->ARR11(3)    --------->AGP1   --------->ANAC46   <---------ANAC58    --------->ARR14(2)            --------->GLK1(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  -------->P    <---------ARR14(2)            <---------ARR14(2)    --------->ARR11(3)            --------->ARR14(2)                               --------->ATHB12    <---------ARR11(3)<-----------HVH21 <---------ANAC58                      <------ZmHOX2a(1)   <---------GLK1(1) xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)                  <---------TOE2(3)--------   --------->GLK1(1)--------->LBD16<-------TEIL       <----------DOF2 <---------YAB1         <------- --------HSFB2a(2)<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)          --------->GLK1(1)<---------YAB1    <   tctagagatccgagaagacatccaggtcatagtgaggttcttgcttacctgagagactttgtgagggagttcaagattgaggagatgattcgtttcgaga  23177400                             --------->HSFB2a(1)                             <---------HSFB2a(1)                       <------NtERF2                      --------->LBD16                     <---------ANAC58                     <---------DEAR3(1)                                      ------>NtERF2                     <---------ANAC58                                  --------->ARR11(3)                     <---------ANAC46                                  <---------ARR11(3)                     --------->ALFIN1                                 <---------GLK1(1)                <---------At4g35610                                   --------->GLK1(1)        ------           <-------GAMYB----------->GT1                           xxxxxxxxxxxxxxxx>smallRNA(i)<------         <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                <---------HSFB2a(1)             ------>NtERF2      <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                 --------->HSFC1(2)             --------->bZIP60(1)  <-------GAMYB --------->At4g35610   --------->DAG2        --------->HSFB2a(1)            <---------bZIP60(1) <---------MYB46(3) --------->ATERF1(1)                <---------HSFB2a(2)  --------->DEAR3(1)------- ->HSFB2a(2)<XXXXXXXXXXXXXXXXXXXXMIR858  --------->ALFIN1   <---------HSFC1(2)     xxxxxxxxxxxxxxxxxx --HSFB2a(2)--------->ALFIN1---------->TaMYB80    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3) ----------->HVH21 ---------TOE2(2)<-----------RAV1(2) ---------->DOF2   --------->HSFB2a(2)  ----------->HVH21<------NtERF2   cggaggttgtgagggttgagcaggcgggggaaaatcccaaaaagtggagagtcaagtctagaaatttcggtgatatctccgacgagatttatgacgccgt  23177500  Previous    Next  AGI:  At1g62580.1    Description:  flavin-containing monooxygenase family protein / FMO family protein. similar to flavin-containing monooxygenase-related / FMO-related [Arabidopsis thaliana] (TAIR:AT1G63340.1); similar to flavin-containing monooxygenase family protein / FMO family protein [Arabidopsis thaliana] (TAIR:AT1G12200.1); similar to FMO-like protein [Thellungiella halophila] (GB:ABJ98059.1); contains InterPro domain Pyridine nucleotide-disulphide oxidoreductase, class I; (InterPro:IPR001100); contains InterPro domain FAD-dependent pyridine nucleotide-disulphide oxidoreductase (InterPro:IPR013027); contains InterPro domain Dimethylaniline monooxygenase, N-oxide-formin Range:  from: 23176998    to: 23180596    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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