Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      -                                                                                                    <                                                                                                    -                                                                                                   --                                                                                                 <---                                                                                                -----                                                                                             <-------                                                                                             ------>NtERF2                                                                                             --------                                                                                            ---------                                                                                            ---------                                                                                            ---------                                         <---------ANAC58                                   ---------                                         <---------ANAC58                                   ---------                                         <---------ANAC46                                   ---------                                       <---------ZAT14                                     --------->DEAR3(2)                                       --------->ZAT18                                     --------->ATERF1(1)                                       --------->ZAT14                                     --------->ORA47(2)                                      --------->ALFIN1                                     <------NtERF2                                    <---------ANAC46                                       --------->DEAR4(2)                                   <------NtERF2                                           --------->RAP2.3(1)                                 <---------ANAC46                 --------->GLK1(2)       ------>NtERF2  <---------MYB52(1)             <---------DEAR3(1)             <---------At4g35610       <---------ATERF1(1) --------ANAC46                 <---------LBD16               <-----------RAV1(2)         <---------RAP2.3(1) ---->ARR14(2)                 --------->LBD16               <------NtERF2               <---------DEAR3(1) -----GLK1(2)                 <---------ATERF1(2)            --------->At4g35610         <---------ANAC46 -----ARR14(2)                --------->ATERF1(2)         --------->At4g35610          <---------ATERF1(1) -->LBD16                    <---------LBD16             --------->ALFIN1             <-----------RAV1(1) -LBD16<---------AHL20(2)   --------->MYB52(1)          <------ZmHOX2a(1)       --------->DEAR3(1) -- ---------AG               <-----------GT1  --------->ZAT18 ----------->RAV1(1) --------->WRKY38(1)<-   ttcgggtatttgattcaagtcgggttttattaccggcggagtggagtgagccatcgaaggagcggcagaagctagaagagcgtcgactctggcgccgacc  17268600                                                --------->ATERF1(1)                                                <---------ZAT2                                                --------->ZAT2                                                <---------At4g35610                                                <-------GAMYB                                                --------->At4g35610                                                <------NtERF2                                               <---------MYB46(3)                                               ------>NtERF2                                               <---------ERF1                                               <---------RAP2.3(1)                                              <---------RAP2.6(2)                                              <---------DEAR3(1)                                              --------->ATERF1(2)                                              <---------ANAC46                                              <---------ATERF1(2)                                              <---------ANAC58                                              <---------ANAC58                                              <---------RAP2.3(2)     <----------DOF2                          <---------RAP2.3(3)     <---------DAG2                           <---------RRTF1(2)   ------>NtERF2                             <------NtERF2  --------->RAP2.3(2)                        --------->ATERF1(1)  --------->DEAR3(1)                         --------->RAP2.6(3) --------->RAP2.3(1)                        <---------ATERF1(1) ----->NtERF2                        <---------DEAR3(1) ---------ATERF1(1)                 --------->At4g35610 -------->LBD16            ------>NtERF2    <---------ERF1 ------->DEAR3(1)         --------->LBD16  <---------DEAR3(1)                                    <--- ------ATERF1(1)         <---------ANAC58 --------->ATERF1(1)                                   ----- ---->AtMYB61            <---------ANAC58--------->ABI4(2)                                      <---- --ALFIN1<-----------GT1 <---------ANAC46--------->MYB55(2)                                     <---- ->ORA47(1)             --------->At4g35610--------->ALFIN1                                     ----- >DEAR4(1)              <---------LBD16  <---------MYB46(3)                                     <---- >RAP2.3(3)          --------->At4g35610<---------DEAR3(1)                                      <---- >DEAR3(1)           <---------ZAT2 <---------At4g35610                          <------ZmHOX2a(2) >RRTF1(3)           --------->ZAT2 <------NtERF2                               <---------ARR11(3) >DREB2C(2)<---------------AGL15<-----------HVH21                               <---------ARR14(2) -->HVH21---------->ID1--------->ALFIN1 --------->ALFIN1                      ----------->ARR10 <---- ------->ANAC46      <---------At4g35610<---------AtMYB61      ------>ZmHOX2a(1)--------->ARR11(3)--- --------ALFIN1 <---------YAB1 --------->bZIP60(2)             =========================HOX2a_HOX2a<-   tccgccgctttttcccttataagagctgcgggcatgtcagcggtggtggcggctgagagatggtcctcttcttgcaagagaagatcagggaagttgagac  17268700                                                  <------NtERF2                                                  --------->RAP2.3(1)                                                 <---------ERF1                                                 <---------ATERF1(1)                                                 ------>NtERF2                                                 <---------ORA47(2)                                                <---------RAP2.3(2)                                                <---------ATERF1(2)       ------>NtERF2                            <---------RAP2.3(3)      <---------TCP16(1)            <---------TOE2(2)      --------->PCF2                <---------TOE1(2)     <---------MYB46(3)      <---------PCF2              <---------SPL7<---------ANAC46      <---------PCF5             <---------ANAC46<---------RAP2.3(1)     --------->ATERF1(1)       <-----------HVH21--------->ATERF1(2)    <---------ATERF1(1)       --------->ANAC58  <---------DEAR3(1)   --------->ALFIN1           --------->bZIP60(2)<---------DEAR4(2) ------SPL7<xxxxxxxxxxxxxxxxsmallRNA(s)         --------->DEAR3(1)                               ---- ---->O2  <---------LBD16     <---------TGA1a  --------->RAP2.3(1)                             <<<<<< -----ANAC58                  <---------O2     --------->ATERF1(1)                   <---------MYB52(1) -----O2--------->ATERF1(1)   --------->TGA1a  <------NtERF2<---------MYB52(1)     <---------ANAC58 ---->TGA1a--------->ANAC58   --------->O2     <---------ABI4(1)                   <---------ANAC58 -----ANAC46                  --------->ANAC58<---------RRTF1(1)              ---------->DOF2  <----- -----ANAC58                  --------->ANAC46<---------ATERF1(1)         --------->ANAC58   -------- -----TGA1a--------->ANAC58 <---------ALFIN1  <---------RAP2.3(1)         --------->ANAC46   <------- ------>ALFIN1          <---------RAP2.6(2)  <---------RAP2.3(2)          --------->ANAC58 <---------MYB52(1) --------LBD16         --------->RAP2.6(3)   <---------DEAR3(1)<---------ANAC46    <---------ANAC46   gtgcggaggggccacggaggtagaagacggccacgtcgtaggctctagcggcggcgatatcggttgtgtaagagccaagccaaagccgtgagcgtttgtt  17268800                                                                            <---------MYB52(1)                                                                        <-------MYC3                                                                        <-------PIF5                  <---------MYB55(2)                                    ------->MYC3                  --------->MYB46(3)                                    ------->MYC2                 --------->ANAC58                                       ------->PIF5                 --------->ANAC58                                       <-------MYC2                ------>NtERF2                         <---------RAP2.6(2) <---------MYB46(3)                <xxxxxxxxxxxxxxxxxsmallRNA(si3)      --------->SPL1(2) ==============================               --------->DEAR3(1)                    --------->SPL7    --------->PIF3(3)               <---------ALFIN1                      --------->RAP2.6(3)------->MYC4       --------->GLK1(2)                            <---------SPL1(1)  --------->O2       ------->TEIL<---------ALFIN1                --------->ZAT14     <---------ANAC46           <--       <-----------ARR10                           <---------ZAT14     <---------PIF3(3)          <--      <---------GLK1(2)                            <---------SPL7      <---------O2               ---    --------->ANAC58     --------->PCF2    <---------ARR14(2)          --------->TGA1a            ---    --------->ANAC46------>MYB83           <---------ARR11(1)          <---------TGA1a           <---    --------->ANAC58------>MYB46(1)        --------->ARR14(2)   --------->REM1(2)                <--- ----->MYB59   --------->RAP2.6(2)        <---------CCA1(2)  <---------ANAC58                   <---- <<<MYB98     --------->MYB46(3)         --------->LBD16     <---------ANAC58 --------->MYB59 <------ ----MYB52(1)--------->At4g35610      ------>ZmHOX2a(1)      <---------ANAC46 --------->MYB46(2)----- ->MYB52(2)  <---------At4g35610   ------>ZmHOX2a(1)--------->SPL1(1)  --------->bZIP60(2)   <------- --MYB46(3) --------->ANAC46<---------ALFIN1    <------------------SPL14<-------MYC4 <XXXXXXXXXXXXXXX   aggctcacgaatctcagccacccacttgccccacttcctcctccgtatccctctgtacggcttccttgtagccacgtggttaggcacttcttcttgaggt  17268900         <----------DOF2 ------>NtERF2 ===================bZIP_DOF -------At4g35610 ----NtERF2 ------>At4g35610                                                    <------NtERF2 ------>ATERF1(1)                                                   --------->ZAT18 ------ATERF1(1)                                                   --------->ANAC58 ------MYB46(3)                                                    --------->ANAC58 -----RAP2.6(2)                                                   <---------ZAT18 ---bZIP60(2)                                      <----------ID1 --------->ZAT18             ------- ---->ALFIN1                                 --------->YAB1   <-----------RAV1(1)         ----------- --AtMYB61                           <----------DOF2       <----------DOF2  *TSS     <---------ANAC55(2) XXXXXMIR830                    ---------->ID1   ---------->DOF2<---------RAP2.3(3)  <---------TOE2(3)   ggctgccttctctttctcatcgtagactcttcttgttctctttccattgataaaagacaaacttttggggcgcaatggaagtttattaagtatggtgaca  17269000                                                               --------->ANAC58                                                               --------->ANAC58                                                              --------->SPL7                                                              <---------TOE1(2)                             <------------CBF               <---------SPL7                    <---------DDF1                         --------->TOE2(1)                    <---------RAP2.6(3)             <---------MYB52(2)                    ------>NtERF2                  --------->ANAC58  <---------AHL20(2)----------->RAV1(1)            --------->ANAC58                           ------- --------->AHL20(2)<---------ETT(1)  <---------ANAC46 <-----------GT1                        <------- ----->CBF         --------->DREB2C(2) <---------HSFB2a(2) --------->TOE1(1)              <---------AHL20(2) >GT1              --------->RAP2.6(2) --------->HSFB2a(2)<---------------AtSPL3   <-----------GT1   atatttaatatagaactatggccgacataaatattggttttgtagaaatagccaagtaacctcgtacgtctcacttgttatctatttactatattatcac  17269100                                                                                          --------->ANAC58                                                                                          --------->ANAC46                                                                         --------->YAB1   --------->ANAC58                                                                 <---------ANAC58       --------->YAB1                          ------>MYB46(1)                        <---------ANAC46      <---------ATHB12                   <------ZmHOX2a(1)                             <---------ANAC58    --------->WOX13(1)              <-------GAMYB                                 --------->At4g35610    XXXXXXXXXXXXXXXXXX             <------MYB46(1)                              <-----------RAV1(2) <---------YAB1    <-----------HVH21  --------->DEAR3(2)                <------ZmHOX2a(2)  --------->YAB1<---------ANAC55(2) -->ZAT6     <------MYB83 ------>MYB83          <-------TEIL<---------At4g35610--------->YAB1 --YAB1      <---------MYB46(3)   --------->AHL20(2)    <---------ARR11(3)  --------->AHL20(2)   tgaatttgtcatggatggttaggagaccgactgaaattgaatactgaagattcatcgagatcagatggcttacaaaaattataaaaacaatcacgaaaac  17269200                                                                                          <---------YAB1                                                             --------->ATHB51       <---------AHL20(1)                        <---------HSFB2a(2)                  <--------ATHB1         <---------AHL20(2)                  --------->ARR11(3)   --------->TOE2(3)    <---------ATHB12        --------->AHL20(2)                  <---------ARR11(3) -------->P             <---------ATHB51     --------->AHL20(1)       <-----------GT1  --------->HSFB2a(2)     <---------AHL20(2)               <---------AHL20(1)   --------->AHL20(2)<----------DOF2 ------->TEIL   <---------AHL20(2)           --------->AHL20(2) < XX>MIR420   <---------ATHB12  --------->ICU4  --------->ICU4<---------ICU4     <---------AHL20(2)  -   tcagtttatatacaaatcaagaacttttagaaaatgatcaacctttgtaaatatttgattcaataattcaaactcttgataaatattttattttcataga  17269300                             <---------ANAC58            --------->AHL20(1)            --------->AHL20(2)            <---------AHL20(1)           <---------CCA1(2) <---------ANAC58                                           <---------PCF5   <---------WOX13(1) ------>ZmHOX2a(1)                                                 <------ZmHOX2a(1) --------->ATHB12    --------->TOE2(3)      --------->MYB52(1)                <------MYB83 ---------- ---------YAB1 <---------AHL20(2)   <----------ID1         ----------->HVH21  <------MYB46(1) -------->ICU4 <---------YAB1<---------ANAC46   --------->LBD16           <-----------RAV1(1)   tgatgattgtttcatatattattcctaagttgcttattaagacaaatacccgtgttttggtatgacagagacttgaatgttggtatcacaggaccacata  17269400                                                    <------MYB46(1)                                                   <---------AtMYB61                                x                                       --------->WOX13(1)<---------AtMYB61                       xxxx                          <---------GLK1(2)        --------->MYB59                              <----                         <---------At4g35610     <---------ANAC46                               -----                        ----------->ARR10      <---------MYB46(3)         <-------GAMYB         xxxxx ->RAV1(1)    --------->ARR11(3)   ------>ZmHOX2a(1)<------MYB83         ----------->GT1        xxxxx   aactaatacaaaatgttatcttgagttagatgctctcctattaatcaagtggtttggttttggtccagtacttctcggttaaatttgattcaagtagaga  17269500  Previous    Next  AGI:  At1g46768.1    Description:  RAP2.1 (related to AP2 1); DNA binding / transcription factor. Identical to Ethylene-responsive transcription factor RELATED TO APETALA2 1 (RAP2-1) [Arabidopsis Thaliana] (GB:Q8LC30;GB:O23103;GB:Q42165;GB:Q9C630); similar to RAP2.10 (related to AP2 10), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G36900.1); similar to RAP2.4-like protein [Populus trichocarpa] (GB:ABQ62991.1); similar to dehydration responsive element binding protein [Gossypium hirsutum] (GB:AAQ08000.1); contains InterPro domain DNA-binding, integrase-type; (InterPro:IPR016177); contains InterPro domain Pathogenesis-related transcriptional factor and ER Range:  from: 17268141    to: 17268976    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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