Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                     <---------ANAC46                                                   <---------ANAC58                                                   <---------ANAC55(1)                                                   <---------ANAC58                                        <---------YAB1                        --------->TOE2(3)      <------ZmHOX2a(1)          <----------DOF2   <---------ANAC55(2)        --------->TOE1(3) ---------YAB1             <---------YAB1--------->YAB1         --------->ALFIN1 ------>YAB1            <---------MYB52(1)       --------->MYB52(1)        <-----------GT1 --------------AGL1    <-------GAMYB  --------->YAB1       <---------AHL20(2)--------->ZAT6 -------GT1            <---------RAP2.6(3)  --------->AHL20(2)  <-----------RAV1(1)         <--------   tcattataggaaatgtagtttaggccgttattgttctttttcattataaaataacgtgtattttatgtgttgctgtttaaccctaaactcagacagcgaa  24020700                                     --------->At5g28300                                    ----------->GT1       --------->YAB1                              --------->LBD16             --------->AHL20(2)                             <---------ANAC58          --------->YAB1                             <---------ANAC58         --------->AHL20(2)                             <---------ANAC46         <---------AHL20(2)                           <-                            <---------LBD16          --------->AHL20(2)                            --               <---------AtMYB61<---------ARR14(2)   <---------AHL20(2)                           <--   <---------GLK1(1)     <---------ANAC58         <---------AHL20(2)                              ---  <---------ANAC58       <---------ANAC58   <----------DOF2--------->AHL20(1)          --------->AHL20(2)  <---------ANAC58<---------ANAC46<-------TEIL --------->YAB1    <---------YAB1        <---------AHL20(2) -At4g35610    --------->ALFIN1 --------->ARR14(2)--------->AHL20(2)           ----------->GT1  -----   tgttgagttccgatgcagtggtgtatggtttgcggatacagtaaaacttttataaattaataatattagaattgcgaaattttgttaatttaaacaaata  24020800                            --------->ATHB51                            -------->HAHB4                            <---------ICU4                            <--------ATHB1                            --------->YAB1                           --------->ICU4                           <---------ATHB51                           <---------AHL20(2)                           <---------YAB1                         --------->YAB1                        --------->AHL20(2)                        <---------AHL20(2)                          ------>MYB46(1)              --------->AHL20(2)                                    ------>MYB83              <---------AHL20(2)                                    -------->P  <---------AHL20(2)   --------->AHL20(1)                           --------->MYB52(1) <---------------AGL15 --------->AHL20(2)                          <---------ALFIN1 --------AHL20(2)      <---------AHL20(2)                          --------->MYB55(1)       <-------- ------->AHL20(2)  <---------AHL20(2)                             <---------MYB55(2)     ---------->ID1 -------AHL20(2)  --------->AHL20(2)                  <---------ANAC58             <----------DOF2 ------>AHL20(2)  <---------AHL20(2)                  <---------ANAC58  <---------MYB52(1) <---------ZAT18 ---->TOE2(3) --------->AHL20(1)                  <----------DOF2 --------->MYB46(3)     --------->PCF2   ttaatttatagagaaattttttaaatttaataattgttttaaaaattgaactcttttcgtagcccaaacccaccggtattgaactctttttggcccactt  24020900                                                                                                   <-                                                                                                   <-                                                                                                -----                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              =======                                                                                              <------                                                                                              <------                                                                                              <------                                                                                              -------                                                                                              <------                                                                                              <------                                                                                              <------                                                                                           ----------                                                                                           ----------                                                                                         <---------ICU4               <---------ANAC55(2)                                 --------->ETT(2)     --------->ICU4      ---------->DOF2                                        <----------DOF2       --------->AtLEC2<-    --------->DOF5.7(2)                                      ========================================   --------->TOE2(3)                                   <---------ANAC58       <<<<<<<ZML2--------->YAB1  --------->ANAC58                                     <---------ANAC58    <---------HSFC1(1) -------  --------->O2 --------->ANAC55(2)      --------->ARR14(2)  <----------DOF2--------->HSFC1(1)--------  --------->bZIP60(2)                   <---------ARR14(2)  <---------DAG2 --------->HSFB2a(2)-------  --------->ANAC58  <-----------GT1   <---------MYB52(2)    ========================================= -ALFIN1   <-----------HVH21 <---------YAB1          <-----------HVH21     <---------HSFB2a(2)=======   agccacgttaaagggtcacttgttactagttgtaattgcaactatctgcctaaaccgtcgtgccttttgtctacattctagaaccatgcactaatgacgt  24021000                          ------->MYC3                          ------->MYC2                          <-------MYC3                          ------->MYC4 --------ANAC58           -------->ABF1 --------ANAC58           <-------MYC2 ---->ALFIN1             <---------ANAC55(2) ---O2                   ======================================bZIP_DOF -->O2                   ======================================bZIP_DOF                            == ---ANAC46               --------->ANAC55(2)                                                       -- ====================MYC_MYB                                                                       <- ---ANAC55(2)            --------->ANAC46                                                          == ---bZIP60(1)            --------->O2                                                              <- ---ANAC58               <---------TGA1a                              <---------CCA1(1)       ------- -->TGA1a     <---------WOX13(1)                                      <---------RVE1(1)   <---------STY1(2) ---ANAC58    <--------P <---------O2                                --------->AHL20(1)  --------->ANAC58 ---TGA1a     =====================MYC_MYB                           <---------ARR11(3)  --------->ANAC58 ---bZIP60(2)<---------ANAC58                                        --------->ARR11(3) --------->ZAT18 ->TGA1      <-------GAMYB<-------MYC4                           ==================================== ->HVH21    <---------MYB46(3)                              ----------->GT1           <---------STY1(2) --------ANAC46 --------->ATHB12                            --------->LBD16           <---------ZAT2- ===bZIP_DOF<------MYB83 --------->TGA1a                   <---------ANAC46           --------->STY1(2) -->ANAC55(2)======================MYC_MYB                 <---------ANAC58           --------->ZAT2< --->STF1   --------->MYB55(2)                             <---------ANAC58   <---------GLK1(2)    -- -->bZIP60(1)<---------ANAC58                             <---------LBD16   <---------TOE2(3) ------- ===bZIP_DOF<------MYB46(1) <-----------HVH21       <----------DOF2  <---------AHL20(1) <---------ZAT18 ======================MYC_MYB                --------->REM1(2)  ---------->DOF2 --------->ARR11(3)==   ggctggagataagttggttgattacacacgtgtcacttagacagagcgagtagactttgatgcgggtaaaagatattttagattatctagctcgctaggc  24021100         <---------RVE1(1)         <---------GLK1(1)         --------->GLK1(1)        <-----------ARR10        <---------ARR14(2)        ----------->ARR10        --------->ARR14(2)       <------NtERF2      --------->LBD16     <---------ANAC46    <------NtERF2    <---------LBD16  <---------DEAR3(1) ==================================bZIP_DOF ------->O2 --------O2 ============================bZIP_DOF                             <-----------HVH21         <-------- --------TGA1a                                                   --------->LBD16           <---------MYB52(1) -->ANAC58<---------ARR14(2)                                   <---------LBD16          ------>ZmHOX2a(2) ========bZIP_DOF       <----------DOF2                      <-----------GT1          <---------ARR14(2) ------>MYC3          ---------->ID1                       <---------HSFB2a(1)   ------>ZmHOX2a(2) -------MYC3      <----------DOF2  <----------ID1          --------->HSFB2a(1)  <------ZmHOX2a(2) ------->TGA1a*TSS<---------DAG2   ----------->GT1         <---------HSFC1(2)   <---------GLK1(1) -->ANAC58--------->ARR14(2)     ---------->DOF2           --------->HSFC1(2)   --------->GLK1(1)<--- ===========================================bZIP_DOF      ------->TEIL <---------DAG2 --------->ARR14(2)   cacgttggcggatatttgcactttttctttttttaaaaagaaaaaaaactaggctctacgaattttccggtcaccttctccgatctctgatccgatattt  24021200                             ------------>MYB.PH3(1)                       <---------ARR14(2)    <-----------RAV1(1)--------->ARR14(2)      --------->YAB1   <-------MYC3       <------ZmHOX2a(1)       <---------YAB1   ------->MYC3     <---------TOE2(3)  ---------->DOF2                                           <--- -RVE1(1)         ---------->DOF2    <---------YAB1                                            ------ --------GT1   <----------DOF2    <---------MYB52(1)       --------->ALFIN1                    <-----   ttccacatgttgttgagctttaaaggatttgaaaccgttatgaaagttatgaaaacgaagagtgtgtgaaacatggggaaggaagttatggtgagcgatt  24021300                               <---------DEAR3(1)                              <------NtERF2                              --------->ATERF1(1)                             ------>NtERF2                             <---------RAP2.3(1)                             <---------ORA47(2)                             <---------ERF1                             <---------DEAR4(2)                             <---------ATERF1(1)                            <---------ATERF1(2)                            <---------RAP2.3(3)                            --------->ATERF1(2)                            <---------DEAR3(1)                            <---------ANAC46                            --------->DEAR3(1)                            <---------RAP2.3(2)                           --------->RAP2.3(1)                           <---------At4g35610                           --------->At4g35610                           --------->DEAR4(2)                           --------->DREB2C(1)                           <---------ABI4(1)                           --------->ATERF1(1)                           <------NtERF2                          ------>NtERF2                          <---------DEAR4(2)                          <---------RAP2.6(1)                          <---------RRTF1(1)                          <---------ERF1                          <---------ORA47(2)                          <---------ATERF1(1)                          <---------RAP2.3(1)                         <---------ATERF1(2)                         <---------RRTF1(2)                         <---------RAP2.3(3)                         <---------RAP2.3(2)                         --------->DEAR3(1)                         <---------DEAR3(1)                         --------->ATERF1(2)                        <------NtERF2                        --------->RAP2.3(1)                        <---------ABI4(1)                        --------->ATERF1(1)                       <---------ORA47(2)                       <---------ATERF1(1)                       <---------DEAR4(2)                       --------->LBD16                       <---------ERF1                       ------>NtERF2                       <---------RAP2.6(1)                       <---------RAP2.3(1)                      <---------DEAR3(1)              ----------->GT1                      --------->DEAR3(1)        <---------HSFB2a(2)                      --------->ATERF1(2)       --------->ANAC55(2)                      <---------RAP2.3(2)       <---------ANAC55(2)                      <---------ATERF1(2)       --------->HSFB2a(2)             --------->ATHB12                     <---------LBD16           <-----------------AG          <---------At4g35610                     <------NtERF2             <-----------------AGL1     ------->GAMYB        ------>NtERF2--------->ATERF1(1)       <---------LBD16         ------>MYB83       --------->DEAR3(1)<---------RRTF1(3)    ----------------->AGL1  ------>MYB46(1) ----------->TGA1    --------->RAP2.3(1)    <---------GLK1(1)          --------->MYB52(1) ----------->HVH21  ------>NtERF2           <---------ARR14(2)        --------->MYB55(1)        ----- ------At5g28300    <---------ATERF1(1)     --------->ARR14(2)       <---------MYB55(2)     --------- --->ARR14(2)       <---------RAP2.3(1)    <------ZmHOX2a(1)         --------->MYB46(3)     <-------- ----ARR14(2)      --------->ANAC46  ------->TEIL--------->LBD16    --------->ANAC46       <-------GAMYB   acggtgacgacgacggagaagacgccggcggcggcgatgaatataggattccggaatgggaaattggtttacccaacggagatgatttgactccgttatc  24021400                                                                     <---------bZIP60(1)                                                                     --------->bZIP60(1)                                                                     <---------O2                                                                     --------->O2                                                          >>>>>>>>>SPL1                <---------ARR14(2)                        >>>>>>>>>SPL5                --------->ARR14(2)                      <---------SPL7<-----------HVH21   <----------            --------->LBD16                 <---------HSFB2a(2)      --------->bZIP60(2) <---------ATHB12  <---------ARR11(3)                      ------>ZmHOX2a(2)       --------->ANAC46<------NtERF2  --------->ARR11(3)        --------->At4g35610        --------->RAP2.6(2)    <---------ANAC58  <-----------ARR10      <---------MYB52(1) --------->HSFB2a(2) <-----------GT1  <-----------HVH21 ---->TOE2(3)   <---------GLK1(2)       <---------ARR11(3)>>>>>>>>>SPL4  --------->WOX13(1) --------- >DOF5.7(2) <-----------HVH21 <----------DOF2         --------------->AtSPL8  <---------ANAC58 -MYB52(1) <---------ANAC46 <---------At4g35610       --------------->AtSPL3 <---------LBD16---------   tcaatatctagtcccgtcgattctcgcgttagctttcagcatgatcccagaacgaagccgtacaattcacgacgtcaatcgcgcgtcgcaaatcacgctc  24021500                                                                                   --------->LBD16                                                                                --------->CCA1(2)                                                                                <------ZmHOX2a(2)                                                                               --------->ARR14(2)                                                                               --------->AGP1                                                                              --------->At4g35610                                                                           <------ZmHOX2a(2)                                                                         ==============HOX2a_HOX2a                                                   ------>ZmHOX2a(2)     <------ZmHOX2a(1)                                                   =============================HOX2a_HOX2a                                                 <---------ARR14(2)      ===============HOX2a_HOX2a                                            <---------ANAC58           --------->LBD16                                            <---------ANAC46          <---------LBD16                                            <---------ANAC58     <---------ZAT6<---------ARR14(2)                                           --------->ALFIN1      --------->ALFIN1------>ZmHOX2a(2)                                        <---------AtMYB61        --------->HSFB2a(1) -GT1                                  <------ZmHOX2a(1)        >>>>>>>>>TAC1----------->ARR10 >ANAC58                       ----------->HVH21 --------->ARR14(2)   --------->HSFB2a(2) >ANAC58            <---------ATHB12   ===================HOX2a_HOX2a <---------HSFB2a(2)        <---   tcttcgttgagaagcagtaccaatgcttcgtctgtgatggaggaggtcgtggatcgagttgaatcgagtgttccaggatcagatccgaagaaacagaaga  24021600  Previous    Next  AGI:  At5g59570.1    Description:  myb family transcription factor. similar to PCL1 (PHYTOCLOCK 1), DNA binding [Arabidopsis thaliana] (TAIR:AT3G46640.2); similar to PCL1 (PHYTOCLOCK 1), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G46640.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN81044.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO21613.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 24021114    to: 24022738    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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