Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100          <----------DOF2              --------->WRKY12       <---------DAG2                --------->WRKY38(1)--------->At5g28300  ----------->HVH21                  ----------->HVH21 --------->LBD16  --------->DEAR3(1)            <---------WRKY18(1)    ----------->GT1 --------->At4g35610           --------->WRKY38(1)   <---------LBD16 <---------At4g35610           --------->WRKY12    --------->ARR14(2)        <------ZmHOX2a(1) --->ZmHOX2a(1)                ----------->HVH21   <---------ARR14(2)<---------------------WRI1     < ----->TOE2(3)             ------>NtERF2          <------ZmHOX2a(1)<---------REM1(1)              --- --ARR14(2)               ------>NtERF2    --------->LBD16      --------->LBD16                  ---- --GLK1(2)               --------->LBD16 <---------LBD16<---------MYB52(1)  <----------ID1       ---- ->ARR14(2)            <---------LBD16<---------WRKY18(1)      <---------HSFB2a(2)               ----   ctcagcgacccttttgttcgtataacccgggccttgaccttgacccggaccaggacccggtaattcccgatgtagataaggacaaggagaacgattacaa  21133000                                                                          ------>NtERF2                                                                         --------->DEAR3(1)                                                                         <---------ALFIN1                                                                       --------->ABI4(1)                                                                       ------>NtERF2                                                                       <---------ATERF1(1)                                                                       <-----------HVH21                                                                      --------->ANAC58                                                                      --------->DREB2C(2)                                                                      --------->DEAR3(1)                                                                      --------->ANAC58                                                                      --------->ANAC46                                                                      --------->DEAR4(1)                                                                      --------->RAP2.6(2)                                                                      ------->GAMYB                                                                     --------->MYB46(3)                                                                     <------NtERF2                                                                     --------->RAP2.3(1)                                                                     --------->ATERF1(1)                                                                   --------->AtMYB61                                                                   <---------ALFIN1                                                                   --------->DEAR3(1)                                                                  --------->MYB46(3)                                                   <---------SPL7<---------ATERF1(1)                                             ------>NtERF2       ------>NtERF2                                          <------MYB46(1)        <-----------HVH21                                          <---------MYB46(3)     --------->LBD16                                          <---------DEAR3(2)    --------->ANAC58                                          <------MYB83          --------->ANAC58                                         <---------DEAR3(1)     --------->ANAC46      --------->ANAC58                   <---------MYB46(3)    --------->MYB46(3)      --------->ANAC58             --------->ARR14(2)          <---------LBD16   --------->ZAT2                  <---------ARR14(2)      ----------->HVH21       <-------GAMYB   <---------ZAT2                 <---------CCA1(2)----------->HVH21--------->ABI4(1)            <--- ---------LBD16               <---------ANAC58   --------->At4g35610<---------ATERF1(1)          ---- ---->GAMYB                   <---------ANAC46   <---------At4g35610------>NtERF2  --------->At4g35610 ----->DEAR3(1)               <---------ANAC58<------NtERF2--------->WRKY45 --------->DEAR3(1)  <---- ----->ANAC58          <---------DAG2    <---------AtMYB61 --------->WRKY12<------NtERF2       <----- ----->ANAC58     <---------MYB52(2)    <---------MYB52(1) --------->WRKY38(1)    <---------MYB46(3)   cgcccggctcgccagtggaaacaaaccttttgtcttgtatccgttggtgccatcggacgagttgacccgccaccgccaccgagtctgttgaagactcgtt  21133100                                                                             --------->ANAC46                                                                             --------->ANAC58                                       <---------ANAC58                      --------->ANAC58                                 <---------AHL20(2)                          --------->RAP2.6(2)    ------>ZmHOX2a(1)            <---------YAB1                           ------->GAMYB ------MYB46(3)             <----------DOF2                              --------->MYB46(3)      ---- ----->MYB52(2)             <---------DAG2         <----------DOF2     ----------->RAV1(1)       ---- -----TOE1(2)     <---------GLK1(1)    <---------ANAC58             --------->YAB1             <----- ----MYB52(1)     --------->GLK1(1)  <-----------GT1            <---------YAB1         --------->ZAT6   tgtttcctccgttcaaatcgaaatccatagctttttttattgcctctcactctctttctctagattacaataacaacagacgcaaattaacacaagaccg  21133200                        ----------->GT1                                  ---------->DOF2                        <------MYB46(1)                             <-----------GT1                     <---------MYB52(1)                          <---------ICU4                <-----------GT1           <---------ZAT2   <---------GLK1(1)            <---------ARR11(3)            <---------At4g35610 --------->TOE1(3)           <------ZmHOX2a(1)              --------->At4g35610 --------->TOE2(3)   ---------->DOF2 <---------YAB1         --------->ZAT2   --------->GLK1(1) -->MYB46(1)--------->ARR11(3)   >>>>>>>>>GATA-1          <---------ARR14(2) -->MYB83<---------TOE2(3)     ----------->GT1            --------->ARR14(2)  --------->GLK1(2) ----MYB59--------->ICU4<------MYB83  <---------ATHB12   <------ZmHOX2a(1)   <---------GLK1(2)   ----   aacttaaaagtaaggatttttccgattggtatatagataaatcaagctgcaaaattggaggaaaccctaattaccaaaagaatctctgagaagtagtaat  21133300                                                           -------->HAHB4                                                           <---------ICU4                                                          --------->ICU4                                                        --------->YAB1                                                       <---------YAB1                                                  ----------->GT1                                                <---------ZAT14                                             <---------ANAC46              <----------ID1      ---------->DOF2                       --------->ALFIN1               ----------->GT1    <---------YAB1----------->GT1     <---------YAB1<---------ZAT6----------->GT1               <---- ----->YAB1     ---------->DOF2  <---------MYB46(3) ----------->GT1    ---------->DOF2  <---------ANAC46   caaaatatgaaagtatgagaaagaaaaatttgggattgttgtgaatgtggtgaagtgataataatgcagagaaaaaagagaaaaactttggagtggattt  21133400                                                                                         --------->O2                                                                                         <---------ANAC46                                                                                         <---------O2                                                                                      ----------->HVH21                                                                                   <---------At4g35610                                                                                   --------->ZAT2                                                                               <-----------TGA1                                                                               <-----------HVH21                                                                              <---------O2                                                                              <---------ANAC46                                    <------ZmHOX2a(1)                         --------->O2                        ===================HOX2a_HOX2a                        <---------bZIP60(1)                        ------>ZmHOX2a(2)                                     --------->bZIP60(1)                       *TSS<---------ANAC46                       --------->ZAT14  <---------ZAT2                       <---------GLK1(1)                          --------->ZAT18  --------->At4g35610                      --------->ARR14(2)                          <---------ZAT18<-----------RAV1(2)                      <---------ARR11(3)                      --------->DAG2  <---------TGA1a                      <---------ARR14(2)                     ---------->DOF2  --------->TGA1a                      --------->ARR11(3)                     ===========================bZIP_DOF                     <---------CCA1(2)                 =================================bZIP_DOF -----AHL20(2)   <----------DOF2<---------ANAC46       ---------->DOF2    <-----------HVH21   <------   atttgtatgtgtttataagctttggatcttcgtggagaggacagaagtagtagaagagaaagagaaagtgaacaccagtcgcgtcagcttgacgtctatt  21133500             <-----------GT1                  <---------ZAT14                            --------->ARR14(2)      <---------YAB1 --------->YAB1          <----------DOF2                <---------YAB1     <-----    <-----------GT1 <---------ATHB12         --------->TOE2(3)           <---------ARR14(2)    <----- ----------->GT1    <---------YAB1        <-----------GT1                --------->ARR14(2)   <------ ------CBF <---------AHL20(2)     <-----------GT1 <---------ZAT6 --------->AHL20(2)  <---------LBD16   gtttagttactattttatccctatgatggctctattttacaaaattactttagtgttttctctcggtttaaatcggttctgatttagaccggattgtagg  21133600                                                                                         <---------ALFIN1                                                                                      --------->ANAC58                                                 --------->ANAC46                --------->ANAC58                                           ------->GAMYB                         --------->ANAC58          <---------ANAC58           --------->YAB1                         --------->ANAC58    <----------DOF2                --------->ANAC58                         --------->ANAC58     ---- <---------YAB1                    --------->ANAC58              --------->AHL20(2)   --------->ANAC58 -MYB83   <---------ANAC46 --------->HSFB2a(2)   --------->YAB1  <---------AHL20(2) <---------GLK1(1) -MYB46(1)<---------ANAC58 >>>>>>>ZML2  <---------ALFIN1   ----------->GT1<---------ANAC58       <--- ---TOE1(2)                <---------HSFB2a(2)   --------->ANAC55(2)      <---------ANAC58 <---------ALFIN1   tttatgcttttgccttggaatgaagggttctaggcacaagcacaaccctatacataatgaagggtttttaaatctagcgagccaagaaaccccacacttc  21133700                                                                            <---------ANAC46                                                                          --------->ZAT14              <------ZmHOX2a(1)                                           <---------ZAT14             <----------ID1                                    --------->GLK1(1)          ---------->DOF2                                      <---------GLK1(1)    <---------ANAC46     ---------->DOF2                                          --------->ARR11(3)    <---------ANAC58 ----->HSFB2a(2)     ---------->DOF2   ----------->HVH21      <---------ARR11(3)    <---------ANAC58 ------HSFB2a(2)  --------->AtLEC2  <-----------RAV1(2)<---------ZAT6  <---------ZAT6          ------   tataactgaaagaaaaggacatgtaaagttagtgagggccagggacatgtttttctagtgaaaagatttccaagtgttcagtgtttgcttagaagaaaaa  21133800                  <---------ANAC58                  <---------ANAC46               --------->DAG2                   --------->AHL20(2)              ---------->DOF2                   <---------AHL20(2)           --------->YAB1                 ----------->RAV1(1)<---------------AGL15     --------->ATHB12             <---------ANAC58           <----------DOF2     <---------ICU4 ----------->HVH21   ------>NtERF2       <---------DAG2    <---------YAB1<---------ANAC58<---------ANAC58          <-----------------AGL3 ---->DOF2<---------YAB1        --------->GLK1(2)        <-----------GT1--------->MYB46(3)   agatagatgattaccataaggcgtgactcatgagaagcttgaggccacatataaatattctaccttttttaagaaccacaatatagaagctatatcagtc  21133900  Previous    Next  AGI:  At5g51980.1    Description:  WD-40 repeat family protein / zfwd2 protein (ZFWD2), putative. similar to ZFWD1 (zinc finger WD40 repeat protein 1), nucleic acid binding / zinc ion binding [Arabidopsis thaliana] (TAIR:AT4G25440.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66448.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 21130587    to: 21133423    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version