Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                     <---------YAB1                                                                                   ------>ZmHOX2a(1)                        <---------ICU4                                     <---------MYB52(1)                   ------->TEIL                                           <----------DOF2           --------->ANAC58                                          =====================HOX2a_HOX2a           --------->ANAC46                                          <------ZmHOX2a(2)   <-----------------AGL1                                           --------->ARR14(2)    --------->ZAT18 -->ARR14(2)   --------------->AtSPL8---------->DOF2     <-----------RAV1(2)      --------->TOE2(3) ---GLK1(2)--------->ANAC58 <---------ICU4          ------->TEIL    <---------ARR14(2)    <---------ZAT18   tgcagtcccaaactcgcaatgtaccatcaatactgactgaaaagagtttatctgaaccctcagggagagcgatcccctttagttccttattgtgcccttc  19965900                     <---------LBD16                 --------->ARR14(2)                --------->WOX13(1)              ----------------->AGL1       -------->P<---------ARR14(2)    --------->HSFC1(2)    <---------HSFC1(2)--------->LBD16                   <---------At4g35610    --------->At4g35610                       --------->ARR11(3)   --------->ANAC58  --------->LBD16    ----------->GT1 --------->ZAT14  <----------DOF2 <---------ICU4   --------->ANAC58 <---------LBD16     <---------ZAT6  --------->At4g35610      <----------DOF2   aagagaagctaccatggccaatccagggaaacaagaccaagagtgtaagaactggcactgctcacccctcttgcactttccatctttccaatacttacat  19966000                                   --------->ANAC58                                   --------->ANAC58                                   --------->ANAC46                            --------->PCF2                           <-----------TCP11(1)                       --------->ATHB12                      <---------YAB1                     ------>ZmHOX2a(2)                     ===================================HOX2a_HOX2a                    <------ZmHOX2a(2)                    ====================================HOX2a_HOX2a                   <---------ARR14(2)                                               <---------YAB1                   <---------AGP1---------->DOF2                          <---------ANAC46                   <---------ARR11(3)                     --------->TOE2(3)       --------->bZIP60(2)                   --------->ARR14(2)                     --------->TOE1(3)  ----------->HVH21------>ZmHOX2a(1)                   <-----------ARR10              --------->ANAC46     <---------ARR14(2)    <-------                   --------->ARR14(3)             --------->ANAC58   <---------MYB46(3)      <-------                   <---------ARR14(3)             --------->ANAC58  <---------AtMYB61--------->ATHB12                   --------->ARR11(3)            ------>ZmHOX2a(1) <---------MYB52(1)<---------ICU4   acccattttctgagactagaagatctcattggcccacaagcagcattcttcctcgccaaacctaaaactggtggtttcggtgacacatcattggtccttg  19966100       <---------ZAT18                                                                           ----   --------->ATHB51    <-----------GT1                                                           ----   --------->ATHB12<---------ANAC46                                                             -----  <---------YAB1 --------->ATHB12       --------->ANAC46                                        <----  <---------AHL20(2)--------------->AtSPL8                                             --------->ARR11(3) --ANAC58  --------->STY1(1)      <---------ANAC58                       <---------SPL7<---------ARR11(3) --ANAC58  <---------LBD16        <---------ANAC58                 <---------ORA47(1)--------->DAG2   gcatattattgccctcgggtgatttgtactcttttgacgtccaaaccagactccttgaaaacttatttggacggtcgtaagggacataaggtcttcttct  19966200                                          --------->LBD16         <-----------RAV1(1)             <---------ANAC46      --------->ARR14(2)           --------->MYB46(3)<---------ARR11(3)      <---------ARR11(3)           --------->REM1(1) <---------ARR14(2)     <---------CCA1(2)        --------->ANAC46       <-----------ARR10 ----->ANAC55(2)              --------->ANAC58       --------->ARR14(2)                            -- ----->ANAC46                 --------->ANAC58       --------->ARR11(3)                    <------ZmHOX2a(2) ---->HSFB2a(2)   <---------ARR11(3)     <---------ANAC58         <----------DOF2          ========== -----HSFB2a(2)   --------->ARR11(3)     <---------ANAC58     ---------->ID1              <---------ARR11(3)   cgtaactatatctgttgcgaaatcttgctgtctcgcaacaactccgtgtgagtagtatctccttggcgctttgtaatccatactgagagagagatcaaac  19966300                                <---------TOE1(3)                                <---------TOE2(3)                 ------>ZmHOX2a(2)                <------ZmHOX2a(2)               <---------ARR14(3)               --------->ARR14(2)               <---------ARR11(3)               <---------ARR14(2)               --------->ARR11(3)               --------->AGP1  <---------DOF5.7(2)               <---------AGP1--------->DOF5.7(2)               --------->ARR14(3)         --------->GLK1(2) <---------ZAT6       <------ZmHOX2a(1)  <---------TOE1(3)       =================HOX2a_HOX2a                                     ----------->GT1       ================HOX2a_HOX2a                               <---------------AGL15 ----->TEIL   <---------CCA1(2)--------->MYB52(1)             ----------->RAV1(1) =============HOX2a_HOX2a <---------TOE2(3)  <------------------SPL14---------->DOF2       ----------   gtatgtagaggaatctagatcttcgattagggttaacgatttctccaactcgttcggagagagccaacaaaaaaaggaaattttgagacggagtaaagaa  19966400                                                                         --------->AHL20(2)                                                                         <---------AHL20(2)                                                                         <--------ATHB1                                                                --------->ANAC58                                                                --------->ANAC55(2)                                                                --------->ANAC58                         <---------At4g35610                 <---------MYB52(1)                         --------->At4g35610                 <---------ARR14(2)                         <------NtERF2                       --------->ARR14(2)                         <---------ZAT2                     <-------GAMYB<---------ICU4                         <---------ZAT14                   <---------MYB46(3)                         --------->ZAT14                   <---------DEAR3(2)                      <---------At4g35610                 <---------ANAC46                  <-----------RAV1(1)                     <---------DEAR3(1)                  --------->ALFIN1   <---------ANAC46     <---------RAP2.6(2)   <------------CBF                 ------>ZmHOX2a(2)   ----------->GT1     <------NtERF2  <---------YAB1               --------->ARR11(3)  ----------->GT1     <---------DEAR3(1)--------->ATHB51               <---------ARR11(3) <---------AtMYB61    --------->ALFIN1 --------->ICU4            <---------KAN4(2)  <------ZmHOX2a(1)     <---------ANAC58 --------->YAB1  ---------->DOF2=====================HOX2a_HOX2a    <---------ANAC58<---------YAB1    <----------DOF2 >DOF2----------->GT1 --------->At4g35610<-----------TBP------------>AtMYB77  <---------YAB1<--------   catgtaaagagtagaatgatctggggctgcagaggaatggtgtatatatagatgagcgtggcggttacgctataataatttctattgggcttaactttag  19966500                     <---------TOE2(3)               ------------>ATHB5              ------------>CBF               <------MYB46(1)            --------->TCP20                  <------MYB83            --------->TCP15(1)              --------->MYB59            <---------PCF2                  --------->MYB46(2)           <---------DEAR3(2)           <------MYB83               --------->RVE1(1)          <---------MYB46(3)       --------->ATHB12               --------->ARR11(3)          <---------TOE1(2)        --------->YAB1        <-----------GT1        <---------LBD16            <--------HAHB4   --------->YAB1<---------ARR11(3)       <---------ANAC58           <---------YAB1   <---------AHL20(2)   <---------ICU4  <---------AHL20(2)   <------MYB46(1)--------->YAB1                          <-----   --------->ATHB12--------->AHL20(2)  --------->MYB59 <---------ICU4   --------->ZAT14     <--------  <---------ATHB12<---------ATHB12<---------ATHB12 --------->AHL20(2)   <---------ZAT14     --------- --DOF2<---------ANAC58  ------------>CBF <---------MYB52(1)--------->TOE2(3)         ---------->DOF2   gcccatcattcgtgggtccaattaatgttcaattctatcattaggttaggtcattaattataccctaaaatctctgtactagtagaaaaaaagaggtctt  19966600                 <---------ICU4                <---------------AGL15         --------->ICU4     --------->ZAT14                                                          ------>MYB83 <---------ARR11(3)     <---------ZAT14                                                        <---------ALFIN1<--------  <---------ANAC46                                               <---------MYB52(1)        --------->ARR11(3) -----DOF2      --------------->AGL15                          <---------ZAT6 ------>MYB46(1)   <---- -ARR11(3)   <-----------GT1      <------ZmHOX2a(1)          <---------At5g28300    <---------ZAT6 >ARR11(3)<---------ICU4       --------->YAB1               <-----------GT1 --------->AtMYB61--------   tattctgtatactaattactaattagagctaaatcaggatgagtccatcgcaacttgtctaattactgttagccaagaccaccctagagtcaatatcata  19966700                                             <---------AHL20(2)                                             --------->AHL20(2)      <---------ATHB12                   --------->ICU4 -YAB1--------->ICU4                   ----------->GT1 -----TOE2(2)    <----------DOF2  ---------->DOF2    --------->WRKY38(1)         --------->At5g28300 ->YAB1--------->YAB1         <----------ID1--------->ICU4      <----------DOF2 ----------->GT1   tgttaacaatgatgtaaaccttttagtattgaaggccaaagtagtaattaatccattgactaacttcttttaaaccttgagacagtgaaatactaactca  19966800  Previous    Next  AGI:  At5g49200.1    Description:  WD-40 repeat family protein / zfwd4 protein (ZFWD4). similar to WD-40 repeat family protein / zfwd3 protein (ZFWD3) [Arabidopsis thaliana] (TAIR:AT5G40880.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66448.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 19965022    to: 19966281    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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