Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  <---------HSFB2a(2)                                                <---------LBD16                                             --------->ARR11(3)                      <---------At4g35610                                       --------->YAB1                  <-----------GT1        --------->ANAC46        --------->GLK1(1)                    <---------AHL20(2)           <--        --------->ANAC58        <---------GLK1(1)             --------->ZAT6         ----------->RAV1(2)        --------->ANAC58       <---------GLK1(2)--------->HSFB2a(2)  --------->AHL20(2)           <-- ---------GLK1(2)         <-----------GT1 <-----------GT1  --------->WOX13(1)        --------->At4g35610   aagaatttcaacgcctctaaaattctttttacagatttctctaataacatctcggagttgtctatcagtaatttatcaatttcattcatctgaagtccaa  18250300                                                                --------->ANAC58                                                                --------->ANAC58                                                              --------->CCA1(2)                                                       --------->ARR14(2)                                                      ------>MYB83                                                      ------>MYB46(1)                                                    --------------->AGL15                                                    <---------------AGL15                                                    <---------MYB59                                                    <---------MYB111(1)                                                   ----------------->AGL1                                                   <-----------------AGL3                                                   ----------------->AGL3                                                   <-----------------AGL1                                                   ----------------->AGL2                                                   <-----------------AGL2                                                   ----------------->AG                                                  ------>MYB46(1)                                                  ------>MYB83--------->ARR14(1)                                                  -------->P <---------ARR14(2)                                                 --------->MYB55(1)                                                --------->MYB46(3)                                                <---------MYB46(2)                                                <---------MYB55(2)                                                <---------MYB111(1)                                    <---------HSFB2a(2)--------->GLK1(2)     ------->TEIL                   --------->HSFB2a(2)<---------ARR14(2)  <---------YAB1            <----------DOF2     <---------MYB111(2)                                 - --------DOF2      --------->AHL20(2)        <-----------GT1 --------->ARR14(2)                   <-- -------DAG2    --------->YAB1--------->ATHB12 <---------At4g35610 <----------DOF2            <------   ctttatgaaacttttcaaacataatataagctttattgccagaagtttcacctaccaaatctggatacgcttttaaaagattactcaacttcttctcttt  18250400                                          <------NtERF2                                         ------>NtERF2                                         ------------>AtMYB77                                         ----------->RAV1(1)                                        --------->RAP2.3(3)                                        --------->RAP2.3(2)                                        --------->DEAR3(1)                                       --------->ATERF1(1)                     --------->ANAC58                                       --------->RAP2.3(1)                     --------->ANAC58                                       --------->RRTF1(1)                  --------->ANAC58                                       --------->ERF1                      --------->ANAC46                                      --------->LBD16                      --------->ANAC58                                      <---------RAP2.3(1)                 --------->LBD16      <---------DAG2                  <---------ATERF1(1)                 <---------LBD16    ------>NtERF2<---------At4g35610 --------->ANAC46                     <---------ZAT18   <---------ALFIN1               --------->GLK1(2)                       --------->ZAT18     <------ -------->ANAC46 --------->At4g35610<---------LBD16                    <---------At5g28300   ------>ZmHOX2a(1) ---------GT1    <---------GLK1(1)--------->ARR14(2)           ----------->HVH21            --------- ----DOF2        --------->GLK1(1)<---------ARR14(2)           ------->GAMYB   --------->ANAC46   aaaccccaccttctcaaggagctccattgtctcaagaatccggcgccagttatatgtttttctaactgacaaataccgcgcaagccaatcgcatcctaag  18250500                                                   ------>MYB83                                                   -------->P                                                   ------>MYB46(1)                                                   --------->MYB52(1)                                                  --------->MYB55(1)                                                 --------->DEAR3(1)     <---------MYB52(2)                                                 --------->MYB46(3)    --------->ANAC58                                                 <---------MYB111(1)   --------->ANAC55(2)                                                 <---------MYB55(2)    --------->ANAC55(1)                                                 <---------MYB111(2)   <---------ANAC55(2)                                                 --------->AtMYB61     --------->ANAC46                                                 <---------MYB46(2)    ----------->GT1                                                --------->MYB46(3)     --------->ANAC58                                                <---------MYB52(2) ----------->RAV1(1)                                               ------>NtERF2   ------->GAMYB                                        <---------ICU4      --------->MYB52(1)          <---------YAB1 <-----------GT1    ----------->RAV1(1)<---------ATHB12  --------->ANAC46       --------->TOE2(3) ---TOE1(2)       <---------At5g28300 --------->ANAC58   --------->ANAC58       --------->YAB1 >TOE2(3)        <-----------GT1      --------->ANAC58   --------->ANAC58 <-----------GT1   tttaatcccttcaacttatttaccacagaaacaaactcacaatcaatgccaccaaccagaagcaacgggcaacaagtaacaagcttaatgactatagcct  18250600                       <-------TEIL                   <---------TOE2(3)                   --------->DAG2                   <---------TOE1(3)             ------>ZmHOX2a(2)            <------ZmHOX2a(2)                                                ------>ZmHOX2a(1)      <           <---------ARR11(3)                                               --------->TOE2(3)     ---           --------->ARR14(2)                                           <---------ANAC58         <---           --------->ARR14(3)                                           <---------ANAC58     <-------           <---------ARR14(3)                                  --------->RVE1(1)            ------>MYB83           <---------AGP1                                     --------->ARR11(3)            ------>MYB46(1)           --------->ARR11(3)                                 <---------ARR11(3)          --------->AtMYB61           <---------ARR14(2)      ------>NtERF2              --------->GLK1(2)       --------->MYB46(3)   ttctaagaaccaagatctcataaggttcaagtttcgatgccaaaaccccattctcgtatacaaaaatctctcttgcttccttatacaaacgaccaatctt  18250700          --------------->AGL15          <---------------AGL15       <---------ARR14(2)       --------->GLK1(1)       --------->ARR14(2)      <---------GLK1(1)      --------->GLK1(1)  <---------LBD16                                                                      ----------->GT1  --------->LBD16                                                                      --------->ANAC58 <---------ANAC46                                                                      --------->ANAC46 --------->O2                                                                <---------MYB52(1) <---------O2                               <---------------AtSPL3          <-------GAMYB ---------LBD16                   <---------ARR11(3)                        --------------------->WRI1 -------->HVH21     ---------->DOF2       --------->YAB1            <---------ALFIN1   --------->ANAC58 --------HVH21--------->YAB1  ---------->DOF2                ---------->DOF2--------->LBD16        -- --ATHB12----------------->AGL2   --------->ARR11(3) --------->bZIP60(1)   <---------ANAC46   -------   gtcacggggaatcccataatagcaaagaacatgaaagttctcaaacatggtactgccatcactcaaagcaccacattccgttgaatgaaacgcaaaatat  18250800                                                                          <----------DOF2                                                                         <---------ANAC58                                                   <---------MYB46(3)    <---------ANAC46     --------->ANAC58                      --------->ATHB12              <---------ANAC58     --------->ANAC46                    <---------WOX13(1)           <---------MYB52(1)     --------->ANAC58                   <------------CBF             <---------At4g35610 ------->At4g35610           ----------->GT1     <------------CBF    <-------GAMYB -->RVE1(1)         <---------HSFB2a(2)--------->ATHB12       ---------->DOF2   cagatggacgcaaacccaaactctcgaaaaatggttcaaactcattgatgggattgttgaagaataaagtccgttgctttcagtttcagtttgaataagt  18250900                                                                          <---------At4g35610                                                                        <-----------GT1                                                                    --------->AHL20(2)                                                                  <---------MYB52(1)                                                                <---------ANAC58                                                                <---------ANAC58 --------->At4g35610             ---------->ID1                                     <---------ANAC46 <-------GAMYB  <----     <----------DOF2   <-----------GT1                       <---------ARR14(2) <-----------RAV1(1) <---------YAB1<----------DOF2           <------ZmHOX2a(1)   --------->ARR14(2) <---------MYB46(3)   cttatgactttgtttgtctttcaaataacatccctaagtattaggagatagactagcatttcagttccgtttatttagcagtctgttgcattcttgttat  18251000                      ------>ZmHOX2a(2)                     <------ZmHOX2a(2)                     --------->GLK1(1)                    --------->ARR11(3)           --------->ANAC58                                 ---                    <---------AGP1           --------->ANAC58                                     <--         <---------ARR11(3)                  --------->ANAC58                                --------   <-----------GT1  <---------ARR11(3)       --------->ANAC46                          <------------- -----YAB1 ------>ZmHOX2a(2)       --------->YAB1--------->ANAC58                      --------------   ctttgtaacttgatctatttaagatctctatcgtctatgagaataacacacaagttacacatttgttctctgagtcactagttcgtttacaacaagtggt  18251100     <----------DOF2 ------>At4g35610                *TSS -------At4g35610              --------->ATHB12 ->ALFIN1                     --------->ICU4                                    --------->ZAT6 --AGL15                    --------->CCA1(2)                                 <<<<<<<<<<<<<<<<<LFY ->AGL15               ---------->DOF2---------->DOF2             <---------LBD16   agcagagcttttgttcttaaacgctcaaagaaatgagtgagaaagatggtttgagcattccaaaattcgacggagattacgaacactgggcaatgctcat  18251200  Previous    Next  AGI:  At5g45113.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT4G19650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44451.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 18249504    to: 18250748    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g45116.1    Description:  transposable element gene. copia-like retrotransposon family, has a 6.2e-227 P-value blast match to gb|AAO73529.1| gag-pol polyprotein (Glycine max) (SIRE1) (Ty1_Copia-family) Range:  from: 18251133    to: 18255155    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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