Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                        ---------->DOF2                                                                <---------TGA1a                                                                --------->TGA1a                                                                --------->O2                                                                <---------O2   --------->HSFC1(2)                                                                <---------ANAC58                                                                <---------ANAC46                                                                =================bZIP_DOF                                                                <---------ANAC55(1)                                                                <---------ANAC58                                                                ===========================MYC_MYB                                            <----------DOF2     <---------ANAC55(2)                                           <---------ANAC58     --------->ANAC55(2)                                           <---------ANAC58    <-----------------------TaNAC69(2)                             =============================================bZIP_DOF                             ---------->DOF2==============================bZIP_DOF  --------------->AGL15 ------ZAT14       --------->ZAT18    <---------ICU4     ---------->DOF2       --------->At4g35610 ----->ZAT14       <---------ZAT18--------->AHL20(2)     =================bZIP_DOF-------->P --ICU4      <---------AHL20(2)----------->GT1<---------------------WRI1       <---------HSFC1(2)   actcagagaatgaaatttatgtccacttaggcaaagttaaatatggcttttgatgaaaccaaagagacgtgttaaagaagaagctaccatgaacagaatc  11024600                             ---------->DOF2                            ========================HOX2a_HOX2a                            =========================HOX2a_HOX2a                            ------>ZmHOX2a(1)   ---------->DOF2                          --------->YAB1      ------>ZmHOX2a(2)                         <<<<<<<<<ARR2       <------ZmHOX2a(2)                         <<<<<<<<<ARR1      --------->ARR14(2)        <---------ICU4                  <----------DOF2           <---------ARR14(2)     --------->YAB1      --------->AHL20(2) <<<<<<<<<ARR1     <------ZmHOX2a(1)     <-----------GT1      --------->YAB1     <<<<<<<<<ARR2  --------->HSFB2a(2) ----------->GT1          --------->TOE2(3) --------->AHL20(2) <-----------GT1     <---------HSFB2a(2) <---------ANAC46---------->DOF2       <--   aaattcaataaaaactaaaactttacaatcctaaagacaattctaggatccaaagctaaatggggtttaacatcatcacaaagtcaacataaaaatcaaa  11024700                               <------ZmHOX2a(2)                             <------ZmHOX2a(1)         <----------DOF2                           --------->MYB59         --------->ZAT14                      --------->AHL20(2)           <---------ZAT18              --------->At4g35610  <---------YAB1   --------->YAB1                  <---------ZAT14              <---------At4g35610 -------DAG2      <---------ATHB12         ---------->DOF2              --------->ANAC46   ccttttgatagaaacttcaaatcataaattaggatcagagaaactaaaagctgtgaactttgaaatcaaatcacacaaaatcagctaatccagtgcttaa  11024800                                                                              <---------ANAC58                              ----------->GT1                                 --------->ANAC55(2)                              --------->YAB1                                  <---------ANAC58                             ----------->GT1                                  <---------ANAC55(2)                             <---------YAB1      ----------->GT1        <-----------ARR10                         <---------TOE2(3)   ---------->DOF2            --------->GLK1(2)                      <---------WOX13(1)   <---------ATHB12            <---------GLK1(2)          <--                    --------->ATHB12  --------->TOE1(3)            ---------->DOF2                ---                   <---------YAB1     --------->TOE2(3)     <---------HSFB2a(1)            <---------ZAT14   ttcgatgtttaaactaaaaccctgattgagaatgataaaaccctaatcaaagagtaaatggaatcgtcgaaaagaatcttacttgactcagagaacacag  11024900                                                                                <-----------GT1            --------->ICU4                                                    XXXXXXXXXXXXXXXXXXXX>MIR773            <---------YAB1                                                  <---------MYB52(1)          <---------ICU4                                                   <-------GAMYB          --------->YAB1                                            <---------ANAC58          --------->ATHB12                                          --------->ANAC46                =         --------->ICU4                                             --------->ANAC55(2)             <     <---------YAB1      ---------->DOF2                          <-----------GT1                  --  --------->ICU4   <---------WOX13(1)                           *TSS<---------ANAC55(2)          ---- -------ZAT18    --------->ATHB12 <---------DAG2    ------>ZmHOX2a(1)     <-----------RAV1(1)   <---- ------>ZAT18--------->ATHB12     <----------DOF2  --------->TOE2(3)<---------ANAC58   <----------DOF2   ggccctgatgaatgattattgattgatcaaagaacacttttttgttttgttttcctaaactatcgtttttacgtctctgttgtttccagcttttgttttt  11025000                                <-------MYC4                                <-------MYC3                                ------->MYC3                                <-------MYC2                                ------->MYC4                                                       --                                ------->MYC2                                                      <--                               --------->ANAC55(2)                                                <--                               <---------ANAC55(2)                                                ---                               ==================================================bZIP_DOF        ----        <-----------GT1        --------->TGA1a                                                   <---      --------->AHL20(2)       <---------TGA1a                                                   ----      <---------AHL20(2)       <---------O2                           ---------->DOF2            <---  --------->AHL20(2)       <-----------GT1                          --------->ANAC58             ----  <---------AHL20(2)  <---------ARR11(3)                            --------->ANAC58             <--- ========================================bZIP_DOF               <---------ANAC58                 <--- ----------DOF2       --------->ARR11(3)              <---------ARR11(3)                         <--- ------->TOE2(3)  <---------MYB52(1)   <---------AHL20(2)      <---------------AtSPL3    <---------ANAC46 ------>ID1      <-------GAMYB --------->O2   --------->MYB46(3)<---------ANAC58       <-----------HVH21 -------GT1      ========================MYC_MYB      --------->ARR11(3)              <-----------RAV1(1)   tcctttaatttatcaagaccgttagattttaacacgtgtattttatcaacgactgagatttttgttgagtacgaaagttgtattatctctgtcgtagaag  11025100          <-----------RAV1(1)       <---------ALFIN1   ------>NtERF2 ---->ZmHOX2a(2)                                                                           <---------YAB1 -------GLK1(1)                                                                           --------->AHL20(2) ----ZmHOX2a(2)                                                                           <---------AHL20(2) ------>GLK1(1)                                                                          --------->YAB1 ----->ARR14(2)                                           <---------YAB1                <---------YAB1 ------ARR11(3)                                     ------>MYB46(1)               <---------ARR14(2) ----->ARR14(3)                                     ------>MYB83                  --------->GLK1(2) ------ARR14(3)                                   <---------MYB59                 <-----------ARR10 ----->ARR11(3)            --------->ZAT18 --------->MYB52(1)<---------YAB1       --------->ARR11(3) ------ARR14(2)       ---------->DOF2 <------ZmHOX2a(1)   <---------AHL20(2)      <---------ARR11(3) ------AGP1    <------NtERF2        <---------TOE1(3)    --------->AHL20(2)       --------->ARR14(2) --------ARR10<---------MYB46(3)    <---------TOE2(3)--------->REM1(1)           <---------ARR14(1)   atctctgcctcactggtggctgtgcaaagtgcaaaattaaggaattaagggacctacatttttattgttgttttgtttgaagagtatcttattaaaatag  11025200                     <---------ARR14(2)                 <---------LBD16                 <---------ANAC46               ------>ZmHOX2a(2)                 <---------ANAC58              <------ZmHOX2a(2)                  <---------ANAC58             <-----------ARR10          --------->LBD16             --------->AGP1             ----------->GT1             <---------ARR11(3)        <---------ANAC55(2)             --------->ARR14(2)        --------->ANAC58                          <-----------GT1             <---------ARR14(2)        --------->ANAC58                       ----------->GT1             --------->ARR11(3)       <-------TEIL                            --------->ANAC55(2)             <---------ARR14(3)       <---------LBD16                         <---------ANAC55(2)             --------->ARR14(3)      --------->CCA1(2)                      --------->AHL20(2)            --------->RVE1(1)        --------->ARR14(1)                     <---------AHL20(2)           ----------->ARR10        --------->ARR14(2)                  <---------AHL20(2)         <-         ---------->DOF2            --------->ARR11(1)                  --------->AHL20(2)    <------      ----------->GT1--------->ARR14(2)--------->ANAC55(2)            --------->TOE2(3)   <---------YAB1     xxxxxxxxxxxxxxxx>smallRNA(i)   <---------ARR14(2)                <----------DOF2----------->GT1   gcacaaattggtaaagatcttcggatttaggcatattagatacggaaatttgagtgtataaccaaaaaaaaactttaattaagtaactagttattctaac  11025300                                                                            --------->TOE1(3)                                                                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                                   <xxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                                  <---------AHL20(2)                                                                  --------->AHL20(2)       <---------AHL20(2)                                                            <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        --------------->AtSPL3             --------->AHL20(2)                                                        xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)       <                                                 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)      <xxxxxxxxx                                                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    xxxxxxxxxxxx                                               <---------AHL20(2) <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                    --------->ARR14(2)  --------------->AtSPL8           <xxxxxxxxxxx                                   <---------CCA1(2)    xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(fl3)  ------                               <-----------HVH21<xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)   xxxxxxxxxxxxx                            <---------ICU4   xxxxxxxxxxxxxxxxxxx>smallRNA(si3)          xxxxxxxxxxxxx                            --------->YAB1  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)        xxxxxxxxxxxxx                           --------->ICU4  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)       <xxxxxxxxxxxxx       <---------YAB1     <---------AHL20(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)        <xxxxxxxxxxxxx  <---------ICU4         --------->YAB1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)        <xxxxxxxxxxxxxx  --------->YAB1        <---------YAB1   xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)         <xxxxxxxxxxxxxx <---------YAB1       --------->YAB1<---------ARR14(2)  <---------------AtSPL8        <xxxxxxxxxxxxxx --------CCA1(2)     <---------AHL20(2) xxxxxxxxxxxxxxxxxxxx>smallRNA(le3)  --------->TOE2(3) xxxxxxx -----GT1            --------->AHL20(2) ------>ZmHOX2a(1)   <-------TEIL <-----------GT1<xxxxxxxxxxxx   catatcattacaatagaatacaatttataataatgtcatatcctactatattatttgggaagtacattttaaatgtaaccttaatttttgtaagtaatta  11025400           --------->YAB1             <---------AHL20(2) ---------TOE2(2)                     --------->AHL20(2) xxxxxxxxxxxxxxsmallRNA(se3)         <---------AHL20(1) xxxxxxxxxx>smallRNA(si3)            <---------AHL20(2) xxxxxxxxxsmallRNA(le3)              --------->AHL20(1) --->AHL20(2)     --------->YAB1     --------->AHL20(2)                                 --------->ANAC58 xxxxxxxxxx>smallRNA(si3)           <---------AHL20(2)                                  --------->ANAC58 xxxxxxxxxx>smallRNA(fl3)           --------->AHL20(2)                                --------->MYB52(1) xxxxxxxxxx>smallRNA(le3)        --------->AHL20(2)                               ---------->DOF2 xxxxxxxxxsmallRNA(se3)          <---------AHL20(1)                              --------->AHL20(2) xxxxxxxxxsmallRNA(si3)          --------->AHL20(1)                              <---------AHL20(2) xxxxxxxxxsmallRNA(le3)          <---------AHL20(2)  --------->ICU4          --------->AHL20(2) xxxxxxxxxsmallRNA(se3)         --------->AHL20(2) ---------->DOF2          --------->AHL20(2) xxxxxxxxxsmallRNA(si3)   ---------->DOF2<---------AHL20(2)   ----------->GT1<---------AHL20(2)     < xxxxxxxxx>smallRNA(s)   --------->AHL20(2)     <----------DOF2             <---------AHL20(1)   ---- xxxxxxxxxxxsmallRNA(se3)<---------AHL20(2)<-----------GT1  ---------->DOF2 <---------AHL20(2)<------   cataggtatgctattagaaataaaaatttaaagaataaattaatttatctctttaaagattagaaagtcaaatactaatttaattaaagaacgaaataca  11025500  Previous    Next  AGI:  At5g29000.1    Description:  myb family transcription factor. similar to transcription factor [Arabidopsis thaliana] (TAIR:AT3G04450.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO44634.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 11022087    to: 11024964    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version