Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        --------->CCA1(2)                      ---------->DOF2                                                <---------ARR11(3)                    <---------YAB1                                               ---------->DOF2                --------->ARR14(3)               <----------DOF2              --------->ANAC58                <---------ARR11(3)               <---------DAG2               --------->ANAC58                <---------ARR14(3)         --------->YAB1                <----------ID1  ---------->DOF2                <---------GLK1(2)          ----------->GT1        <---------------------WRI1        -                --------->ARR11(3)    --------->AHL20(2)          <------ZmHOX2a(2)  --------->ARR11(3)   aaaactcatagtcttcaagattttgaaagtgatcaacaaaaaaaatcgtaactttatgtcttaatccgatcgaaatggacaaggaaagatataaagagag  6230100                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                                  ---                                                                                             ------>NtERF2                                                                                             --------                                                                                             --------                                                                                          ------>NtERF2                                                                                         --------->RAP2.3(3)                                                                                         >>>>>>>>>AtERF-1                                                                                         >>>>>>>>>AtERF-2                                                                                         --------->RAP2.6(2)                                                                                         --------->RAP2.3(2)                                                                                         --------->DEAR3(1)                                                                                         <---------ATERF1(2)                                                                                         --------->ATERF1(2)                                                                                         >>>>>>>>>AtERF-4                                                                                         >>>>>>>>>AtERF-3                                                                                         --------->ANAC46                                                                   ------->GAMYB         >>>>>>>>>AtERF-5                                                                   ------------>AtMYB77 --------->MYB46(3)                                                                  --------->MYB46(3)    --------->ATERF1(1)                                                               <---------WRKY38(1)     --------->At4g35610                                                               <---------WRKY12        <---------ATERF1(1)                                                       ------>ZmHOX2a(2)       --------->YAB1--------                   <---------ANAC58                   <------ZmHOX2a(2)    <---------ANAC46 ---------               --------->HSFB2a(1)                    <---------GLK1(1)    <---------ANAC58--------->ATERF1(1)              ------->TEIL                           --------->ARR11(3)    <---------ANAC58<------NtERF2        --------->ARR14(2)              <---------WRKY12 <---------LBD16--------->ARR14(2)<---------RAP2.6(3)        <---------ARR14(2)    --------->ALFIN1       <---------ARR11(3) <---------ARR14(2)<---------ATERF1(1)  <---------WOX13(1)        --------->CCA1(2)       --------->GLK1(1) <---------DEAR3(2)--------->RAP2.3(1) -------->ATHB12   <---------ANAC58---------->DOF2  <---------GLK1(1) <---------MYB46(3)--------->ERF1   agtgattgagaattcgaacctgcttgagagagatggggaaagtcaacttagaagagatctcagggacaacgacggtttcgttcataagtagccgccagcc  6230200                                                          --------->At4g35610                                                        --------->RAP2.3(1)                                                       ------>NtERF2                                                       <------NtERF2                                                   --------->ORA47(1)                                                   <-----------HVH21                                             <---------ATERF1(1)                                             ------>NtERF2------>NtERF2         --------->LBD16            <---------RAP2.6(2)<---------ATERF1(1)        <---------DEAR3(1)          <---------ANAC46 --------->SPL7        --------->RAP2.3(3)        --------->RAP2.6(3)--------->ANAC46        --------->RAP2.6(2)      ----------->HVH21 <---------SPL7        --------->ATERF1(2)    <---------O2  --------->LBD16        --------->DEAR3(1)     --------->TGA1a <---------ALFIN1        <---------ATERF1(2)    --------->O2 --------->ANAC58       --------->RAP2.6(3)     <---------TGA1a--------->MYB46(3)       <---------LBD16 --------->ANAC46     --------->ANAC46                 <---------HSFB2a(1)     ------->GAMYB  --------->MYB46(3)      --------->RAP2.6(2)              --------->HSFB2a(1)     --------->ANAC46<---------ALFIN1       --------->ANAC58                <---------ARR14(2)     ====================================MYC_MYB------>NtERF2      --------->ANAC58 ------>ANAC58     ------>NtERF2<-----------HVH21<------NtERF2     --------->ANAC46 ------>bZIP60(2) --------->RAP2.6(2)------>NtERF2--------->DEAR3(1)    --------->YAB1 ------>ANAC58 --------->ANAC46=====================MYC_MYB <----------DOF2 <-----------ARR10 ------>ANAC46 --------->ANAC58========================================bZIP_DOF                     - ------>O2     --------->ANAC58<---------ANAC46--------->DEAR3(1)  --------->ANAC58       --------->ARR11(3) ->ANAC58<---------ATERF1(1)<---------ANAC46------->GAMYB--------->DEAR3(1) --------->GLK1(2)      <- ->ANAC58------>NtERF2 --------->ANAC58    --------->SPL7--------->RAP2.3(2)--------->ARR14(2)    <-- ->ANAC46<---------DEAR3(2)------>NtERF2   --------->MYB46(3) --------->REM1(1)           <---------ARR11(3) >DEAR3(1)<------NtERF2--------->ANAC58  <---------SPL7<---------At4g35610 <---------GLK1(2)   <-----   acgacaaacgccggcacaagccaccacgctgcgtcgtgacggccatccgccaccgtccgccgcttcaacacgaatcagaatctccctaagaagctcttca  6230300                                                            <------NtERF2                                                          --------->ATERF1(2)                                                          <---------ANAC46                                                          <---------ATERF1(2)                                                         <---------DREB2C(1)                                                         --------->DREB2C(1)                                                         --------->ATERF1(1)                                                         <---------ABI4(1)                                                         <------NtERF2                                                         --------->RAP2.3(1)                                                         <---------At4g35610                                                         --------->At4g35610                                                        <---------ERF1                                                        <---------DEAR4(2)                                                        ------>NtERF2                                                        <---------ATERF1(1)                                                        <---------RRTF1(1)                                                        <---------RAP2.6(1)                                                        <---------RAP2.3(1)                                                        <---------ORA47(2)                                                       --------->ATERF1(2)                                                       <---------RAP2.6(2)                                                       <---------RAP2.3(2)                                                       <---------RRTF1(3)                                                       <---------RRTF1(2)                                                       <---------RAP2.3(3)                                                       <---------ATERF1(2)                                                       --------->DEAR3(1)                                                       <---------ANAC46                                                       --------->ALFIN1                                                       <---------DEAR3(1)                                                      <---------ABI4(1)                                                      ------>NtERF2                                                      --------->ATERF1(1)                                                      <------NtERF2                                                     <---------ATERF1(1)                                                     ------>NtERF2                                                     <---------RAP2.6(1)                                                     <---------RRTF1(1)                                                     <---------RAP2.3(1)                                                    <---------RAP2.3(2)                                                    <---------DEAR3(1)                                                    <---------RRTF1(2)                                                   --------->At4g35610                                                   <---------LBD16                                                  <-----------RAV1(1)                                                <---------ZAT2                                                --------->At4g35610       --------->AtMYB61                                                <---------At4g35610    <---------PCF5                                                --------->ZAT2        --------->WRKY12                                                <------NtERF2         --------->WRKY38(1)                                                ----------->RAV1(2)   --------->WRKY45                                                --------->ATERF1(1)<---------ANAC58              ----     ----------->HVH21                         <---------ATERF1(1) <---------ANAC58          -------- -------->GLK1(2)                             ================RAV  <---------ANAC46     <---------HSFB2a(2) --------GLK1(2)          ----------->HVH21   <-----------RAV1(2) --------->ALFIN1      --------->HSFB2a(2) ----ZmHOX2a(1)  --------->GLK1(2)       --------->ARR14(2)------>NtERF2  <---------ALFIN1   -------- ----LBD16       --------->ARR11(3)     <---------ARR14(2)<---------DEAR3(1)  --------->ANAC46  -----   ggaatctctgaccagcgataatcttgcgatgacacagaagtggaatcggcagctgcggcggcggcaaggtcgtggaccacacgatgcggtctcgaacgca  6230400                       <---------SPL7                       --------->TOE1(2)                    <-----------HVH21              --------->ANAC58              ---------->DOF2              <---------ANAC55(2)        <---------ANAC55(2)              --------->ANAC58        <---------ARR14(2)            <---------YAB1              <---------ANAC46        --------->ARR14(2)          --------->YAB1 ----->At4g35610  --------->DAG2  <---------LBD16                <---------YAB1             <------ZmHOX2a(1) ->ANAC58     --------->ANAC55(2) --------->LBD16             <---------YAB1       --------->ALFIN1 ->ANAC58    <-------TEIL        --------->HSFB2a(2)        <---------At4g35610  <---------ANAC46 <-- -->TEIL  <---------At4g35610    <---------HSFB2a(2)    <----------DOF2         <---------TOE2(3) ---   tctcaaggattaagctacgtaaggtcatacgacttctggggatacttaaaggctgagtctttagatgattataatcgagttttaggtggaagaaggagaa  6230500             <---------MYB46(3)          <---------ANAC46       <---------AtMYB61                         <------------CBF       --------->ALFIN1                         --------->ATHB12     <---------MYB46(3)                         <---------ICU4    <---------DEAR3(1)                          -------->ATHB1    <---------AtMYB61                           <--------ATHB1    --------->ALFIN1                            --------->ATHB51  <---------MYB46(3)                           <---------YAB1 --------->ALFIN1                              --------->ICU4               --------->ANAC58        < <---------AtMYB61                             <---------ATHB51             --------->ANAC58        < <---------DEAR3(1)                    *TSS------------>CBF         <-----------GT1                 = -------AtMYB61                     --------->ATHB12            --------->AHL20(2)         <---------AHL20(2) ------>ALFIN1                    <---------WOX13(1)       <---------TOE2(3)--------->ANAC46        <   gtggtggtggtggtgttgttgagaagaacgaagtagattgatttcaacaattattgatatcaacgttttattacttctaagcaaattttgtatttttttg  6230600                    <---------DOF5.7(2)                    --------->MYB52(1)               --------->AHL20(2)               --------->AHL20(1)               <---------AHL20(2)              <---------AHL20(2)                    <---------ANAC55(2)                   <----------              --------->AHL20(2)              <---------AHL20(2)             <-------TEIL -----------        ----------->GT1                       --------->AHL20(1)          ----------->GT1------------        <---------ANAC55(2)                   --------->AHL20(2)         --------------->AtSPL8       --------->MYB59                       --------->AHL20(2)          <---------------AtSPL8 <---------------AGL15                       <---------AHL20(2)          --------->DAG2  ------------ --------------->AGL15                 ----------->GT1            <------NtERF2          ============ -----------------AGL1           --------->AHL20(2) ----------->GT1    ---------->DOF2  ------------- -----------------AGL3<----------ID1   <---------ANAC55(2)       ----------->GT1    --------->YAB1 ==================================================================================================== -----------------AG<-----------GT1   --------->MYB59          --------->RAP2.6(3) <---------YAB1----   gttcttaaataggtaaaaaaattaacgacaaaaaaaaaaataggtaaaaaaattatgtaaaaccagtcggcaaaaaaggtacattataaaaaccaaaata  6230700        --------->AHL20(2)       --------->AHL20(2)   --------->AHL20(2)     --------------->AGL15 -----AGL15              <---------ANAC58 ---->AGL15--------->AHL20(2) ----->AGL3<---------AHL20(2) ----->AGL2<---------AHL20(1) =========================================MADS_MADS<----------DOF2 ----------->ANAC81      <---------ANAC58       <-----------GT1                 <---------YAB1 =====MADS_MADS      <----------DOF2         <---------AHL20(2)    <---------AHL20(2) ------->GT1      <-----------GT1     --------->YAB1               --------->AHL20(2)               <   agaaaaaaaataaaaaattttaactttacttgaaattgtattagaatttttttctttatgttgacacatttattttggagttatccttgagacattctct  6230800                                                                                      <---------AHL20(2)                                                                                  --------->AHL20(2)                                                                                  --------->YAB1<----                                                                                  <---------AHL20(2)                                                                        ------->GAMYB --------->AHL20(2)                                                                        ----------->HVH21      ------                          --------->ICU4                                --------->DEAR3(1)     <-----                          <---------YAB1                    <----------DOF2--------->ANAC58    <-----                        --------->YAB1                  --------->KAN4(2)  --------->ANAC58--------->AHL20(2)                       <-------TEIL                <---------YAB1       --------->At1g77200<---------AHL20(2)                    <---------At4g35610            --------->ICU4      --------->MYB46(3) --------->AHL20(2)          <---------TOE2(3)<---------ICU4         <---------TOE2(3)    --------->DEAR3(2) <---------AHL20(2) ---------WOX13(1)  --------->At4g35610         --------->ICU4         <---------MYB55(2) <---------AHL20(1)   taattgatttttgatgttgatcagcttcataattccatagaatgacagaaataatgtttattcttttgtttcaaccgacgctaattatataatttaatta  6230900                                              <---------REM1(1)                                   ---                                       ----------->GT1                               <---------YAB1 -----AHL20(2)                     <---------YAB1     --------->ANAC58           --------->AHL20(1) --->AHL20(2)                <---------AHL20(2)       --------->ANAC58          <---------ICU4  ----- ----AHL20(2)                --------->AHL20(2)     ---------->DOF2         --------->AHL20(2) <----- ----AHL20(1)                <---------AHL20(1)    <------ZmHOX2a(1)     ----------->GT1       <-----   atttgatttgtttcaaacaatagcaaactattttattttgatagtaaaatgtaggaaagcatgactatgttatatcagttaaatattatgctaccaatac  6231000  Previous    Next  AGI:  At5g18680.1    Description:  AtTLP11 (TUBBY LIKE PROTEIN 11); phosphoric diester hydrolase/ transcription factor. Identical to Tubby-like F-box protein 11 (TULP11) [Arabidopsis Thaliana] (GB:Q6NPQ1;GB:Q6YNX7); similar to ATTLP9 (TUBBY-LIKE PROTEIN 9), phosphoric diester hydrolase/ protein binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G06380.1); similar to unknown [Populus trichocarpa] (GB:ABK94895.1); contains InterPro domain Tubby, C-terminal (InterPro:IPR000007); contains InterPro domain Cyclin-like F-box (InterPro:IPR001810) Range:  from: 6228167    to: 6230539    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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