Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                        <---------WRKY18(1)                                                                                     --------->WRKY12                                                                                     ----------->HVH21                                                                                     --------->WRKY38(1)                                                                                    <--------P                                                                                    <---------WOX13(1)                                               <---------ANAC58                    <-------GAMYB                               ---------->DOF2 <---------ANAC46                   <---------MYB46(3)                       <---------YAB1          <---------ANAC58                <---------ZAT2    ---- ------>TOE2(3)   --------->DAG2     <---------MYB46(3)                   ------>ZmHOX2a(1) <-------- >ARR14(2)       ---------->DOF2     ----------->GT1                   ------>ZmHOX2a(1)-------->ZAP1 >ZAT14   <---------YAB1--------->ATHB12<-------TEIL         <-----------GT1   --------->ZAT2 -------   cattaatacattatgttcaaaaagcctgattgtaaaagatggttcatttgcttataagataacttactatctcctcctccaagctggttgaccgcttcaa  6030400              <------ZmHOX2a(2)              --------->CCA1(2)             <---------AGP1             --------->AGP1             --------->ARR14(3)                                                  --------->ARR14(2)             <---------ARR11(3)                                                  <---------ARR14(2)             --------->ARR14(2)                                          ------>ZmHOX2a(1)             <---------ARR14(2)                                        ----------->RAV1(2)             --------->ARR11(3)              --------->ATHB12      <---------ARR14(2)       ---------             --------->GLK1(2)        <----------DOF2              --------->GLK1(2)        <--------      <---------ANAC46               <---------ANAC58              --------->ARR14(2)      <------ZmHOX2a(1) ----->MYB46(3)------>ZmHOX2a(2)     <---------ANAC58              <-----------ARR10 <---------At4g35610 --DOF2      <---------ARR14(3) <---------ANAC58 --------->ZAT14  <---------GLK1(2)  ------>ZmHOX2a(1) -->REM1(1)----------->ARR10    <---------ANAC58 <---------ZAT14  --------->ARR14(2) ----------->RAV1(2)   caaatctctcgtgaagatctggagtccattttagtcgtggctttgcatcagtggagagaatgagtccagaatctcctgtgccatttcctctgaggaacgg  6030500                                                              ----------->GT1       --------->At4g35610                            <-----------------AGL1       <---------At4g35610                     <---------ANAC58     --------->HSFB2a(2)             --------->ARR14(2)  <-------GAMYB     <---------HSFB2a(2)             <---------ARR14(2) <---------MYB46(3)                         <-  <----------DOF2      --------->HSFB2a(2)     <---------ANAC58      <---------ANAC55(2)     -------- >MYB52(1)             <---------HSFB2a(2) <----------DOF2 <---------MYB46(3)              ---------- -ARR14(2)  --------->CCA1(2)       <------ZmHOX2a(1)<---------At4g35610                --------->AHL20(2)   atgcctttcagaagaaatgggcattctcgatgaagagaggatgctctttccttggtgctggttgtggtaatacataagtctgtcttcaaaataaaaaggt  6030600                                      ---------->DOF2                                    --------->ZAT18                                    <---------ZAT14                                --------->ATHB12                                <---------ICU4                        --------->GLK1(2)                               <---------YAB1                    <<<<<<<GRF7                               --------->ICU4                  ----------->HVH21                             -------->HAHB4                   <---------MYB59            ------>MYB83     <---------ICU4                  --------->ANAC55(2)            ------>MYB46(1)  --------->YAB1                  <---------At4g35610           ---------- --------At4g35610          --------->ICU4              <----------DOF2  <----------DOF2  -------->P ->DAG2  --------->ZAT2     <---------ATHB51  ------>MYB83 <-----------GT1        <---------AHL20(2) >DOF2 <---------ALFIN1   --------->YAB1      ------>MYB46(1)----------->RAV1(2)  <---------YAB1   aagcttatcccacctagcaatactgcattaataatgagtgcaaagaccaaatgtttttcttttacctgacacaatctttagtttttaattgcaacctgct  6030700                                                <---------ARR11(3)                                      ------>MYB46(1)                                      ------>MYB83                                    --------->MYB46(3)                                    <---------MYB111(1)                                     <------NtERF2                    <---------TOE2(3) -------->P--------->ARR11(3)------>ZmHOX2a(1)        <------NtERF2              <-------TEIL          <---------MYB111(2)          --------->TOE2(3)         --------->LBD16      <---------ZAT14               <---------ALFIN1         <----------DOF2              <---------LBD16      --------->ZAT14               --------->AtMYB61   <---------At4g35610              <---------LBD16 ->RAV1(2)   --------->CCA1(2)     --------->MYB46(3)<----------DOF2          <----------DOF2   actctcagttcagagatacactatggtttgcaactccaccaacttgggaagatgtctttgctgctttccttatttatgctctttttctcaggccggggtc  6030800                                     ---------->DOF2                              <-----------TBP                            <---------------AGL15                            --------------->AGL15                            <----------DOF2                            <---------DAG2     ----------->GT1                   --------->CCA1(2)                           <-----------------AGL2      ----------->GT1        <---------TOE1(3)                           ----------------->AGL3     --------->DAG2          <---------TOE2(3)                           ----------------->AGL2    --------->DAG2   --------->YAB1           ------    *TSS ---------->DOF2   <-----------------AGL3   ---------->DOF2  <---------YAB1            <-----    ----------->GT1    <----------DOF2      <---------AtLEC2       <------ZmHOX2a(1)      <---------YAB1   tctcaagagtaaaaagtctttgcaactttgctttatatagaaagttgaatggcaaaaaggcaaattagaggatgataactaaggtatggaatatgaataa  6030900                                                       <---------ANAC58                                                       <---------ANAC58                                                      <---------At4g35610                                                    <---------ZAT18                                                   <---------ANAC58            <---------ANAC58                       <---------ANAC46         <---------MYB52(1)                        <---------ANAC58 <-----------GT1       <---------ICU4                          <---------ANAC58   <---------AHL20(2)             <---      <---------ATHB12                         <---------ANAC46 <---------YAB1                   <---  ------------>CBF                             <---------ANAC58<---------AHL20(1)      --------->ZAT14 --->MYB52(1)<----------DOF2           <-----------GT1--------->At4g35610           ------>ZmHOX2a(1) ------GT1  <---------ANAC58 <---------YAB1  ------->TEIL   --------->TOE2(3)<---------YAB1  --------   ctggtccaatcgttgctttgttatttgtgttcttatcgtttaaactgtaccttgtgtgcttacattattttttctagttttgattcctctggactacaac  6031000                           --------->CCA1(2)     <---------ZAT18       --------->ARR14(1)     --------->ZAT14      --------->ARR11(1)                                                 <-------     <---------ZAT14      <---------ARR14(2)   --------->AHL20(2)                            -------- ------DAG2---------->DOF2--------->ARR14(2)   <---------ICU4           <-----------------AGL1 -------DOF2            ----------->ARR10      <---------AHL20(2)      --------->REM1(1)     <------- ->REM1(1)--------->AHL20(2)<-------TEIL------>ZmHOX2a(2)   <---------LBD16             ---------->DOF2   ttttcagtgcaattaaagccttgcattagatacgagaattgatccacaattaatgcatcatatgcgcattccttcaccattctggtatatgaaagtatct  6031100                                                                                           --------->MYB46(3)                                                                                          -------->P                                                                                          ------>MYB46(1)                     <----------DOF2                                                --------->ZAT2       <---------ARR11(3)                                                           <---------At4g35610       <---------ARR11(1)                                                           <---------ZAT2       --------->ARR14(2)                               ------>ZmHOX2a(1)           --------->At4g35610       <---------ARR14(2)                --------->GLK1(1)     ------>ZmHOX2a(1)  --------->ANAC46      <---------CCA1(2)                  <---------GLK1(1)    --------->TOE2(3)--------->ZAT18 ----ARR10<----------DOF2           <------NtERF2<----------DOF2               <---------ZAT14 ->ARR11(3)          <---------DAG2 --------->At4g35610--------->TOE2(3)  ---------->DOF2 ------>MYB83 --ARR11(3)    <-----------GT1    <-----------RAV1(2)---------->ID1 --------->AHL20(2)  <---------ALFIN1   tattctccaaatctttttgacaacttttctacttgggcaggggaattcattctttttccttattcctcaattttttcaaagtccacagctccaacctctc  6031200                      <---------ANAC58                      <---------ANAC58                <---------YAB1               --------->TOE2(3)            --------->KAN4(2)           --------->KAN4(1)           <---------KAN4(1)           <----------TaMYB80          ---------->TaMYB80          <---------KAN4(2)                                          <-----------GT1               <-      <---------TOE2(3)<----------DOF2                    ---------->DOF2          <-------TEIL   ---   tatctcttgaggtatattctcaatgctttccacttgtctgtattgtttttgttccgacttgaaagtcattttttcagtctctacatacatcttaaatcta  6031300  Previous    Next  AGI:  At5g18240.1    Description:  MYR1 (MYB-RELATED PROTEIN 1); transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G04030.3); similar to unnamed protein product [Vitis vinifera] (GB:CAO23500.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 6028287    to: 6030804    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g18245.1    Description:  other RNA Range:  from: 6028287    to: 6033233    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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