Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                    --------->GLK1(2)                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                                                 <---------ARR11(3)                                                                 <---------GLK1(2)                                                           --------->HSFB2a(2)                                                           <---------HSFB2a(2)                                                       ------>ZmHOX2a(2)                                                      <------ZmHOX2a(2)                                                     <-----------ARR10                                 <-------GAMYB       --------->GLK1(2)                                --------->MYB55(2)   --------->ARR14(3)                                --------->MYB111(2)  <---------ARR14(2)                                --------->MYB52(2)   <---------ARR11(3)                                <---------MYB46(3)   --------->ARR11(3)                             <---------MYB46(3)      <---------ARR14(3)                            ------>ZmHOX2a(2)        --------->ARR14(2)    ---------->DOF2         ===============================HOX2a_HOX2a ---->YAB1                 <------ZmHOX2a(2)        <------ZmHOX2a(1)           --------->ATHB12 --->ICU4                  ================================HOX2a_HOX2a         <-------TEIL      <--- ----YAB1                 <---------ARR14(2)       ----------->ARR10 <----------DOF2          ------- >GT1                     --------->ARR14(2)    <---------ANAC46 --------->ARR11(3)  <---------YAB1 -   atgagataaagagagttcaaagttggacgatcggttgttgttttcgagttgggaggatcttcttgaagattctttagaagattcattgtgatggtattga  5411000     <---------HSFB2a(2)    <---------LBD16  <---------ARR11(3)  --------->GLK1(2)  --------->ARR11(3)  --------->ARR14(2)                                                                             <---  <---------ARR14(2)          <------ZmHOX2a(2)                     --------->HSFC1(1)         <----- <---------GLK1(1)           --------->ARR11(3)              <<<<<<<<<MYB2       ------>MYB83  ------ --------->RVE1(1)           <---------AGP1               <---------AtMYB61      ------>MYB46(1)----- ------YAB1       --------->ALFIN1               <---------ANAC46   <---------HSFB2a(2)       <------ -->ICU4        <---------bZIP60(2)              <---------YAB1     --------->HSFB2a(2)     <-------- ------>TEIL    <---------ANAC46            <---------MYB46(3)      <---------HSFC1(1)     --------->ICU4   tgaatatctgggagactgatgtggagagatagatcagggagagtagttgttgtgtttgttttggttttctctagaaaaacaccttccatagacataatta  5411100                                                                        <---------YAB1                                                                      <---------ICU4                                                 --------->YAB1       --------->YAB1                                                 <------ZmHOX2a(1) --------->YAB1 <-----------GT1                          <---------YAB1          --------->ICU4 ------TOE2(3)                          --------->YAB1         <---------YAB1 ----AHL20(2)                    <---------MYB46(3) --------->YAB1<---------YAB1 --->AHL20(2)               --------->ZAT14    <---------TOE2(3)--------->YAB1   <----------DOF2  <-- ----->DOF2                 <---------ZAT14--------->YAB1      --------->ICU4  <--------------------- ---YAB1              ------>NtERF2    <---------YAB1 --------->ICU4 <---------YAB1               --- -ICU4             <---------At4g35610 --------->ICU4 <---------YAB1 --------->ICU4   ---------->ID1-   aagaaacctttctcttgctattgctgccactgaagttgttgatgatgataaggatgatgatggtgatgatgatgatgactattcttttgttttttttttc  5411200                          --------->ICU4           <---------ANAC58                     ---------->DOF2            ----------->GT1 -------LBD16   <------ZmHOX2a(1) <---------------AGL15               ---------->DOF2            ---- ---ANAC81 <---------ANAC58       --------------->AGL15        <----------DOF2        --------->ALFIN1 -------->RAV1(2)    <---------AHL20(2) <------ZmHOX2a(1)   --------->GLK1(2)     --------->DAG2<---- ----->ZmHOX2a(1)   --------->AHL20(2)<---------TOE2(3)    <---------GLK1(2)    ---------->DOF2 -----   tcctgagggttttgcttaggaatttaaaatgattttctctaaggagaagagaaagcagagagattctttaggcaaagaagtcaaaagggtgtctgaaaga  5411300             ---------->ID1          --------------->AtSPL8          ---------->DOF2                    <---------HSFC1(2)      <---------AHL20(2)       <---------ARR11(3)           --------->At4g35610 ----->CCA1(2)                 --------->ARR11(3) --------->DAG2            --------->GLK1(2) -----ARR11(3)                <---------CCA1(2)  ---------->DOF2     ---------->DOF2 ---->ARR11(1)    <----------DOF2     ---------->DOF2       --------->CCA1(2)--------->HSFC1(2)   tttgatattttttttgttctctttctctctctatatctcagaaagaaaggagaaagtgagagagatgaagttaaagagaagcttagaagaagagagagaa  5411400              <---------HSFB2a(2)              --------->HSFB2a(2)          ------>ZmHOX2a(2)        <---------ARR11(3)                                                                          -        --------->ARR11(3)                                                                          - <---------ANAC58                                                                              <----- <---------ANAC46          *TSS   ---------->DOF2         ---------->DOF2                    <-------GAMYB <---------ANAC58      <---------MYB52(2)           ----------->GT1                          <-------   gttgagtgatgatcttcttgaagaaacaaacatgctcaaagtaagacgcagagagagagaaaaagaaggaagagagagatagagagaggtatgtgtgttg  5411500          <---------At4g35610     ------------------------>ANAC81           <---------AHL20(2)   ---------->DOF2    ----------->GT1          --------->AHL20(2) -------->ANAC58     ------------------------>ANAC81                              <---------MYB46(3) -------->ANAC58   ---------->DOF2       <------ZmHOX2a(1)            --------->CCA1(2)          ---- ----ANAC46   ----------->GT1          --------->LBD16               --------->ARR11(3)    <-------TEIL --ZAT14  --------->At4g35610         <---------LBD16    <--------P  <---------ARR11(3)    ------->TEIL   tgaagcaaaggcagaagagaaaaaaggaataaaactaaatccaggaaaattaaaaacaggtaagagagagagatatatgtgtgttcgttcatgtacatgt  5411600                                                                                          <----------                                                     <---------MYB46(3)                   -----------                                      <---------ARR14(2)                                 <-----------                  --------->ARR11(3)  <---------ARR11(3)        ----------->GT1          ------------             <-----------HVH21        --------->ARR11(3)       ----------->GT1           <-----------   ------->TEIL  <---------At4g35610 <---------CCA1(2)      ---------->DOF2             ------------- --->TEIL------->TEIL       ------>ZmHOX2a(1)        --------->MYB52(2)   <---------YAB1-------------   atgtgtatgtgtatgtgtgagatgttgttcctcgagagtatatcttggaaaacgatagttgagaaagggtaatattgtcattcgctatattccaaatatt  5411700                                                                                            <--------                                                                                            <--------                                                                                           <---------                                                                                        <---------YAB1                                                                                       --------->AHL20(1)       <---------AHL20(2)                                                             <---------AHL20(2)   <----------DOF2                                                                   <---------AHL20(1) <---------HSFC1(2)                                                                  --------->AHL20(2) --------->HSFC1(2)                                                               --------->AHL20(2) -----AGL15            <------MYB83                                              <---------AHL20(2) ---->AGL15            ----------->GT1                                           --------->AHL20(2) ----AGL15             <------MYB46(1)                                     --------->AHL20(2) --->AGL15            <---------AtMYB61        <---------DAG2          --------->YAB1<---------AHL20(2) ------AGL3<---------AHL20(1)               <-----------GT1         --------->WOX13(1)--------->AHL20(2) ---->AGL3 <---------AHL20(2)          <----------DOF2  --------->ANAC58   <---------AHL20(1) ---->AGL2 --------->AHL20(2)        ---------->ID1     --------->ANAC58   --------->AHL20(1)<-------   ggaagctttttattttattttgggatggtatttcaatttgtctttttcacctttcaacaagtaaacccatctatcaatataatataaattattttacggc  5411800     <---------WOX13(1)   --------->ATHB12  <---------AHL20(2)  --------->AHL20(2)                                           --------->DAG2           <---------ARR11(3) -At5g28300                                                 >>>>>>>>>GATA-1             --------->ARR11(3) -LBD16                                            --------->GLK1(1)       --------->YAB1 --GT1 --------->ATHB12                            <---------GLK1(1)    --------->YAB1<---------AHL20(2) --RAP2.6(2)                                    <---------YAB1---------->DOF2        --------->AHL20(2)   tagattaattgatttcatgttttagtttattcgtttaaactactgaaattttgatttccatagataaagttgaagaataatagcaaaataaatcttgttt  5411900  Previous    Next  AGI:  At5g16560.1    Description:  KAN (KANADI); transcription factor. similar to KAN2 (KANADI 2), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT1G32240.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO38744.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 5406866    to: 5411427    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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