Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ATHB12                                    --------->MYB46(3)                                   -------->P                     --------->GLK1(2)                                   ------>MYB46(1)                --------->ARR11(3)                                   ------>MYB83                   --------->ARR14(2)                                  ------>MYB46(1)                 <---------ARR14(2)                               --------->ANAC46                   <-----------ARR10                --                          --------->YAB1                         <---------GLK1(2)      --------->GLK1(2)        -------->P       <---------ATHB12                        <---------ARR14(1)    <---------GLK1(2) -->MYB46(1)           --------->WOX13(1)                  ---------->DOF2             --------->ARR14(2) -->MYB83       <---------ARR11(3)------>MYB83          --------->CCA1(2)<---------ZAT18<-----------ARR10   agctaaaaactaccccttgatattccaatcaaaacccaaccatacaactaaactagggatataaagagaatcttggggactcgaatagagattctcacct  2758000                                 <-----------GT1                        --------->AHL20(2)                           ----------->GT1                          --------->ICU4                         --------->At4g35610                   --------->ANAC58                         <---------LBD16                       --------->ANAC46                   ---                      ---------->DOF2                          --------->ANAC58           <---------YAB1 --------->RAV1(1)  --------->YAB1                --------->ICU4  ---------->DOF2      <---------MYB52(1)   ccaacaaaatgaaattccctaaaaataagcggaaaaaaccctactctctctactgatgaactaagacgcaaagattaattcaacttatcgttatgagata  2758100                                 --------->ANAC58                                 --------->ANAC58                               ---------->DOF2                                        <----------ID1                            --------->ANAC58                                          ----------->GT1     --------->ANAC58       --------->ANAC58                                     >>>>>>>>>TBF1     --------->ANAC58  ----------->HVH21                                      >>>>>>>>>TBF1   ---------->DOF2   <---------At4g35610             --------->TOE1(2)    --------->At4g35610       < ------->DOF2     <---------AHL20(2)  --------->MYB52(1)                  <---------At4g35610       <   gaaaggaaagcaagaagaaatttatctgataggcaaagcaaaacggagattgaaacgagggaatcagagaattggcagaagaagaagaaggaaaaatgtg  2758200                         <----------DOF2                                            <------ZmHOX2a(1)            ----------->GT1                                                        ----------->GT1           ----------->GT1 --------->ATHB12                                        <----------ID1    <---------YAB1   <---------ANAC46                                             ----------->GT1 ---------DAG2      <---------LBD16                          <------ZmHOX2a(1)<------ZmHOX2a(1) ----------DOF2    --------->ALFIN1               <---------At4g35610   ---------->DOF2   aactttatgagaaatggaaaattgggggtttattgggttttcaagggattgcagcaacttgaaggagagagagagaaagaggaataggaaaaacccagaa  2758300                                     --------->ANAC46                                            ----                                     --------->ANAC58                                         -------                              <-----------HVH21                                               -------                             ----------->GT1                                              --------->TOE1(3)                          --------->ALFIN1       <---------TOE2(3)            --------->At5g28300----                     --------->CCA1(2)         ---------->DOF2               ----------->GT1  -------                   --------->CCA1(2) --------->ANAC58          *TSS  ---------->DOF2--------->YAB1   gactgagagagagagagagagagatagggaggggtcaaaacgccattgttaaaggaaggggaagttcaaaacaaagaaacagtgaataaaaaccataagc  2758400                    <---------At4g35610                                                             -                    --------->At4g35610                                                             -          --------->ZAT2                                                                          <--      <-----------GT1  <-------GAMYB                   <---------AHL20(2)                      <----- ----->MYB52(1)     <------NtERF2                  <---------AHL20(2)                         ------- -->ANAC46--------->At4g35610                      --------->AHL20(2)                         ------- -->ANAC58<---------At4g35610              --------->WRKY38(1)<-----------GT1                 ------- ------->RAV1(1)  --------->ZAT18     <------------CBF<---------YAB1                     <---------ANAC58 -->ANAC58<---------ZAT2      <---------YAB1     <----------DOF2                         <---------ANAC58   aacagttttcacagctcaagtccgctgttgttatttttggtattgttgactcttttattatttgttacacttccaattcatattggaatttccttgttga  2758500   <---------ICU4                         <------MYB46(1)  <---------ATHB51                ------>ZmHOX2a(1) ----->MYB83          <-----------GT1     <------MYB83                               <----------DOF2 ----->MYB46(1)      <---------YAB1       ----------->GT1                 <----------DOF2 -------MYB59     <---------AHL20(1)     <---------TOE1(2)             <-----------GT1       ------->MYC3 ----WRKY18(1)    --------->AHL20(2)     <---------TOE2(2)           <-----------GT1<---------ANAC58 -->WRKY12        <---------AHL20(2)    <---------MYB52(1)       <----------DOF2    <---------ANAC58 -->WRKY45        --------->AHL20(1)  --------->ATHB12         ---------->ID1   <---------ICU4------- -->WRKY38(1)  ------->TEIL   <---------ALFIN1                <-----------GT1--------->YAB1  <-------MYC3   ccaaattatgccatatgtattttattactgctactcctcatcgttggtaatttcatatcagttttttcttttttcactttcataatgctttcgcatgtga  2758600                                                  --------->AHL20(2)                                                  <---------AHL20(2)                                                  <---------ICU4                                               --------->YAB1                                       <---------YAB1    --------->SPL7                                 -------->ATHB1<--------ATHB1                                 --------->ATHB12 --------->ATHB12                                 --------->YAB1--------->ATHB51                                 --------->ATHB51 --------->ATHB51                                 <---------ICU4<---------ICU4                                 <--------ATHB1<--------HAHB4                                <---------YAB1--------->ICU4           --------->DAG2                                <---------ATHB12 --------->ICU4      ---------->DOF2                              --------->WOX13(1) <---------YAB1    <---------YAB1                             ------------>ATHB5-------->HAHB4    --------->YAB1        <----------DOF2     <------NtERF2     <---------ATHB51  --------->ICU4 <---------ARR11(3)        --------->ANAC58   <---------YAB1--------->At5g28300 <---------GLK1(2)         --------->ANAC58 --------->YAB1 ----------->GT1 --------->ARR11(3)   <---------LBD16--------->YAB1  <---------------AtSPL8  <---------ATHB12 ---->HVH21   ----------->HVH21 --------->ICU4--------->AHL20(2)<---------YAB1--------->AHL20(2)   ctagatttttcttttggtgacatttggggaggcaatcattgatgaataataattatttgtacggtgattataaaaggcaatgaaatactatatcaaacta  2758700                                                                                                    -                                                            <---------ANAC46                <--------                                                            <---------ANAC58                ---------                                                            <---------ANAC58  --------->LBD16    ----                                   <---------------------WRI1     ----------->HVH21      <---------ARR14(2)                             ----------->GT1          <---------YAB1     <----------DOF2 --------->ARR14(2)     <---------ICU4       <---------CCA1(2)   ---------->DOF2  <---------ARR14(2)   --------->AtLEC2<    --------->ICU4   <---------At4g35610  <----------ID1 <---------WOX13(1) <-----------------AGL1  -   tttgtaaacattgttcaaacttaagctcatatcgaaaatcgaaaacaacaaagatgctaattgcctatatgacgactttccgagttatgcaaatatgtga  2758800          <---------YAB1                                                                 --------->ALFIN1  <---------AHL20(2)                                                         --------->DAG2 -------->ANAC55(2)                                               --------->DAG2      --------->ALFIN1 -ANAC55(2)                                                      --------->DAG2    <----------------- >ANAC55(2)                                                     ---------->DOF2 --------->ALFIN1 ----->ICU4                                             --------->ARR11(3)  --------->DAG2    ------- ---------ANAC55(2)                                 ---------->DOF2        ---------->DOF2--------->ZAT18 ---------->GT1   --------->MYB46(3)             <---------ANAC55(2)  ----------->GT1 <---------AtMYB61   ttatgtaatttcatcatacaacaacttgttgattcagtagttctatcgattaagtaaagaaattggaaaaggggggaaaaaggtgggagaggtggacaaa  2758900  Previous    Next  AGI:  At5g08520.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT5G23650.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65952.1); contains InterPro domain Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609); contains InterPro domain SANT, DNA-binding; (InterPro:IPR001005); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 2755176    to: 2758363    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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