Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                        --------->GLK1(1)                                                      --------->At4g35610                                        --------->ANAC58                                        <---------ANAC46                                        --------->ANAC58                                        <---------ANAC55(2)                        <---------TOE2(3)           <------ZmHOX2a(1)                     <---------ANAC46             <-------TEIL               ----------->GT1                        ----------->GT1            --------->CCA1(2)           --------->ANAC55(2)                  <---------ZAT18 <-----------GT1   <----------DOF2     <-----------------------TaNAC69(2)    --------->ZAT14 -HVH21---------->DOF2  <---------TOE1(3)  ---------->DOF2                   <---------ZAT14     >>>>   atttcaccagaaagattcaaactttgaaggttaatggaagagacgtaaagagtaggagctctagtacatgtgataccagtccagttacaatggtgcgaag  2150600               --------->TOE1(3)               --------->TOE2(3)              ----------->RAV1(2)             ------>MYB83             -------->P             ------>MYB46(1)           --------->AtMYB61            ---------->DOF2                                  ---------->DOF2         >>>>>>>>>>MYB80              <---------YAB1                                   ----------->HVH21        <-----------GT1    <---------DAG2                                    ------>ZmHOX2a(1)    ---   <---------ZAT6          <----------DOF2                               <---------ARR11(3)       <--   ----------->GT1---------->DOF2  <------ZmHOX2a(2)  ------->TEIL       --------->ARR14(2)       <-- >>>>>TBF1--------->MYB46(3)<----------DOF2      <----------DOF2         <---------ARR14(2)       ---   aagaagtgttaaaccaacctgaaagagagccttttggatcatcaaaggaggctttgaatctgagaaggttaccaagttcctcgttctctgtgaaagagaa  2150700                                                                                                    -                                                                                                   <-                                                                                                   --                                                                                                   <-                                                              <--------P                          <--                                                             <---------MYB52(1)                   ---                                                        --------->ARR14(2)                        ---                                                        <---------ARR14(2)                        <--             >>>>>>>>>TBF1                              ------->TEIL                              <--          >>>>>>>>>TBF1                            <---------ANAC58                               --- ------>ARR11(3)                                   <---------ANAC46                               --- -------ARR11(3)                                   <---------ANAC58                               <-- -------ARR14(3)      <-----------HVH21           <---------MYB46(3)           <---------TOE2(3)  <-- ------>ARR14(3)>>>>>>>>>TBF1                 <-----------RAV1(1)     --------->YAB1             <---   ggtcttggtgaagaagaagaagaatgtcaaggctagtgagattgaaaactggtgcttgaatctggtagccattaatgagttaagaatagagaatgaagag  2150800             <---------ZAT14             --------->ZAT14         --------->ATHB12  <---------At4g35610  --------->At4g35610 ----->ZmHOX2a(2) --------GLK1(1) ------->GLK1(1) -----ZmHOX2a(2)                                                                                  --- -------ARR11(3)                                                                            <------MYB83 ------>ARR11(3)                                                                        <---------ANAC46 ------>GLK1(2)                                                                         --------->ALFIN1 -------ARR14(3)                                                                    <---------LBD16 ---------ARR10                                                                   <---------ARR14(2) ------>ARR14(3)                                                                  --------->ARR14(2) ------>ARR14(2)                                                          --------->ALFIN1<--------P< -------AGP1 --------->ZAT18                                            <---------At4g35610<---------MYB46(3) -------ARR14(2)                                                      <-----------RAV1(2) --------->ALFIN1 ---ZmHOX2a(1)      <---------ZAT6                           <------------CBF----------->GT1<------MYB46(1)   gatctgctgaatgagtgaagtagtgagagagtgagagtgagagtgagagtgagagtgagagtgaattgaatttcaggtgttgaaaatacggggtgggttt  2150900                           ----------->GT1                           --------->YAB1                    <------MYB46(1)                    <------MYB83                    <---------MYB46(3)   --------->YAB1   ----------->GT1        --------->ARR14(2)  --------->ICU4   <---------AtMYB61       <---------ZAT14  <---------ATHB51<--------P               <---------ARR14(2)               <---------AtMYB61      -- --------->CBF   <-------GAMYB   --------->YAB1                     <---------MYB52(1)         ------ ---------------AGL15<-------GAMYB  ---------->DOF2               ----------->GT1              <-----   tgcaattataagatagtagggttggttaatggtaaaaataaagagtatagggtttagtttgaaatttcccgttaaattttggtcgagggtctatggggaa  2151000                         --------->HSFB2a(2)                         <---------HSFB2a(2)                     --------->O2                 <---------CCA1(2)          <---------ETT(2)<---------ANAC46    ------>ZmHOX2a(2)          --------->ETT(2)*TSS                <---------ANAC58    <---------ARR14(2)   <---------LBD16      <---------ANAC58                                    <-- <--------P          <---------TGA1a         <------ZmHOX2a(2)                                    <-- ==============================MYC_MYB      --------->ARR14(2)                           --------->ANAC58 --------->GT1       --------->TGA1a        <---------ARR14(2)          --------->WOX13(1)    <------ --->ARR14(2)        <---------O2       <---------LBD16              <-----------GT1     --------->ANAC58 ----ARR14(2)   --------->MYB52(1)   <---------GLK1(1)          <----------DOF2       <---------ATHB12   ctggtagatttgtagacaaaacgacgtctcggagattggaatttcggatcgtgtctctctctgtttctttgtttcaatccgatttcgaatcaagcccttt  2151100                             <-----------HVH21       <----------DOF2                            --------->ANAC46        <---------DAG2     ------->TEIL           --------->bZIP60(2)     --------->TOE2(3)   <---------ZAT18         --------->LBD16        ------>MYB46(1)   <---------ZAT14     <-----------GT1            -------->P                             --------->HSFB2a(2)   --------->ZAT18<---------ANAC58           --------->ANAC58                            <---------HSFB2a(2) -------ANAC58    <---------ANAC58           --------->ANAC58                   ---------->ID1 -------ANAC58--------->ARR11(3)             --------->ANAC46               <----------DOF2 ----DOF2     <---------ARR11(3)--------->MYB52(2)------>MYB83       <-----------GT1    <---------LBD16   acttgtgcaccttcaagatttcgtttttccaggtcagtttcttcatcaagccaacctttttttctagggtttttcttcctttgttttttttctgggagtt  2151200                                                                                            <--------                                                   ----------->GT1                          <--------                   <---------HSFC1(2)        <----------DOF2                 --------->TOE2(3)                   --------->HSFC1(2)       <---------ANAC58                 --------->TOE1(3)             ------>ZmHOX2a(1)              <---------ANAC58        <----------DOF2       <---------At4g35610   ------>ZmHOX2a(1)                  <----------DOF2           --------->WRKY12---------->DOF2   ttctccttcacagtcctaagaagctacttgttaactctgtctttttgcttttgaagttaaacctagttgactttctcaagcttaaagagttcagcttttt  2151300                                                                                           <---------ANAC58                                                                                           <---------ANAC46                                                         --------->TOE2(3)           <--------P          ----------->GT1                               ----------->GT1            --------->MYB55(2)     <---------YAB1                       <---------ARR11(3)                       <---------MYB46(3)     <---------AHL20(2)             -------->P       <---------AHL20(2)           <---------AtMYB61 -DAG2--------->ATHB12           <---------At4g35610<---------AHL20(2)            --------->ALFIN1 --DOF2 <---------WOX13(1)       --------->At4g35610--------->AHL20(2)<---------GLK1(1)    <---------ANAC58   tttttttttaattggtgattttgttcttaattttgagctaccaaaatcatcgaattaaatgttaatctcttgaattctgtttcggtggtagtttcttggt  2151400                                                                                --------->CCA1(2)                          --------->ARR14(2)                                    --------->GLK1(1)                          <---------GLK1(2)                                    <---------ARR14(2)                 <-------TEIL                                                  --------->ARR14(2)              <---------At4g35610                                     <---------DAG2              --------->At4g35610       <---------HSFB2a(2)           <----------DOF2        <---------At4g35610             >>>>>>>ZML2      <----------DOF2   <---------LBD16     ------        --------->At4g35610             --------->HSFB2a(2)        <-----------GT1<---------YAB1 <---    --------->YAB1        <---------ARR14(2)             <---------DAG2--------->ZAT14         ------   ttgaaatcatagctgcagcttcatgccgaattctcactggttctagatttagagtttagctttttttttttactttactcggatatgaatactgagtaag  2151500  Previous    Next  AGI:  At5g06940.1    Description:  leucine-rich repeat family protein. similar to HSL1 (HAESA-LIKE 1), ATP binding / kinase/ protein serine/threonine kinase [Arabidopsis thaliana] (TAIR:AT1G28440.1); similar to H0305E08.2 [Oryza sativa (indica cultivar-group)] (GB:CAH67431.1); similar to Protein kinase [Medicago truncatula] (GB:ABN08138.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23535.1); contains InterPro domain Protein kinase, core; (InterPro:IPR000719); contains InterPro domain Protein kinase-like (InterPro:IPR011009); contains InterPro domain Leucine-rich repeat, N-terminal (InterPro:IPR013210); contains InterPro domain Leucine-rich repeat; (InterPro:IP Range:  from: 2148079    to: 2150772    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At5g06950.1    Description:  AHBP-1B (bZIP transcription factor HBP-1b homolog); DNA binding / transcription factor/ transcription repressor. Identical to Transcription factor TGA2 (TGA2) [Arabidopsis Thaliana] (GB:P43273); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.2); similar to TGA6 (TGA1a-related gene 6), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT3G12250.1); similar to TGA-type basic leucine zipper protein TGA2.1 [Phaseolus vulgaris] (GB:AAK84889.1); contains InterPro domain bZIP transcription factor, bZIP-1; (InterPro:IPR011616); contains InterPro domain Basic-leucine zip Range:  from: 2151026    to: 2154554    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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