Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                              --------->ANAC58                                                                        <-----------HVH21                                                                 <---------AHL20(2)                                         <---------AHL20(2)    <---------CCA1(1)                              <---------AHL20(2)              <---------ARR11(3)                              <---------YAB1                  --------->ARR11(3) -----------GT1              --------->AHL20(2)     --------->YAB1 <---------AHL20(2)      --------->ANAC46 --->GT1                     <---------AHL20(2)    <---------YAB1<---------YAB1        <---------AHL20(2) -TOE1(2)                   --------->YAB1   ----------->GT1 <<<<<<<<<RAP2.2--------->ANAC58   ------   aattacaaatttccgactagaatacaacaattttaattcgttttaaaatgtttattatagtttagatattattttgtcacgaatactatatatatgccac  16881000                                                                           --------->AHL20(2)                                                                           <---------AHL20(2)                                      --------->ARR11(3)              <---------AHL20(1)              --------->YAB1   --------->DAG2           --------->YAB1--------->AHL20(2)      --------->AHL20(2)  --------->ANAC58     ------>ZmHOX2a(1)  --------->YAB1                  <--   ----------->GT1        --------->ANAC58  ---------->ID1       <---------ATHB12           <--------  ----------->GT1--------->AHL20(2) <---------YAB1     ----------->GT1<---------AHL20(2)    <-------- >NtERF2     <---------YAB1   ---------->DOF2  <----------DOF2 --------->WOX13(1)           ---------   ctatgtgttaaaattttcataaattaccaagaaaaagtatgattttgtccttttgaaatgaaaatcaatcaaaaaatttatatacacatttgaatatcta  16881100                                       --------->AHL20(1)                  ----------->GT1 ------->TEIL                          <---------AHL20(2)               <---------ANAC46 -------ATHB12                   ----------->GT1                        <---------ANAC58 ---ARR10             --------->ANAC58 <---------AHL20(1)               <---------ANAC58 -ARR11(3)            --------->ANAC58 --------->AHL20(2)   <---------AHL20(2)     <-------TEIL >ARR11(3)          ---------->DOF2 --------->YAB1   <----------DOF2  <---------ANAC46         <-----   atgaattttagttgaaattttggaaagacacaattcagtaataaaatgtgtatttctttgattttttttgttttgtgtggtcaaattcgttggaaatact  16881200                                                                                                 ----                               <---------ICU4                                                   <----                            --------->TOE1(3)                                                   -----                            --------->YAB1                                                 XXXXXXXXXX                            --------->TOE2(3) ------->TEIL                                <---------TOE2(3)                     --------->ATHB12         <---------YAB1                         <---------------AGL15                    --------->ICU4  --------->TGA2(1)                                --------------->AGL15                    <---------ATHB12--------->bZIP60(1)                             -----------------        ----------->GT1<---------YAB1    <---------ANAC55(2)                        -----------------     --------->ALFIN1-------->HAHB4 <---------bZIP60(1)          --------->YAB1     ----------------- ----ANAC55(2)      <---------YAB1<-----------GT1           --------->AHL20(2) <-----------RAV1(1) <-   taaaaatgtgttgaaaattgaaatgattaatcttaattacatcacatgaatattgactaaaatgaaataatagtatatgatatgttgccataaatgttat  16881300        <---------DAG2 ----->YAB1                                            <---------MYB52(1) -----YAB1  <---------YAB1                        --------->ARR14(2) ---->ICU4  <---------AHL20(2)       <-----------HVH21<-----------HVH21 XXXXXXXXXX>MIR418           --------->YAB1       <---------ARR14(2)                     <<<<<<<<<TBF1 >AGL3  --------------------->WRI1  ----------->GT1  ----------->GT1   *TSS           <<<<<<<<<TBF1 >AGL1  <----------DOF2     <---------YAB1        ------------>MYB.PH3(1)    <<<<<<<<<TBF1 >AG <-----------GT1      --------->YAB1     ---------->DOF2      --------->ZAT6   <<<<<<<<<TBF1 --------YAB1           <---------MYB52(1) <---------ATHB12      --------->ZAT14<<<<<<<<<TBF1 <------   gatgaattaactttataattttcgccgtttataataaaccgtcaaatcaaaggaaccgttacttctcaacactcacttcttcttcttcttcttcttcttt  16881400                                                                           ---------->DOF2                                                                        ------>ZmHOX2a(2)                                                                       --------->At4g35610                                                                      <---------ARR11(3)                                                ===============================HOX2a_HOX2a                                                <------ZmHOX2a(1)     --------->ARR11(3)     <-------      <----------DOF2                        --------->LBD16      <------MYB46(1)            <------- <<<<<<<<<TBF1            <---------CCA1(2) <---------TOE2(1)     <------MYB83               <------- ----DOF2   <----------DOF2                 <---------TOE1(1)--------->ATHB12                <-------   ttcttcttctttttctttctatctctctctatcttctctctaatgtccgaggaattgaaccagtgatttggtgatctcaaagactctcaaaaatttcgtg  16881500    <----------DOF2   ------>ZmHOX2a(2)                                           --------->ARR11(3) <---------ARR11(3)                                            <---------ARR11(3) --------->ARR11(3)                                        ---------->DOF2 --ANAC55(1)                   ----------->GT1        <---------MYB46(3)                  --------->At4g35610 --ANAC58              <---------ZAT18              <---------MYB52(1)                    <---------At4g35610 --ANAC46           <---------MYB46(3)             <-------GAMYB                <------MYB83 --ANAC58      <---------YAB1<---------ANAC46   <---------At5g28300<-------TEIL <------MYB46(1)     <   tttgatctttgtctattttcatttgttcgcttcgggttataagttaacttcaccgttggataaaagatgttcgtgaagaagttggtcgagatagcagcca  16881600              ------>ZmHOX2a(2)                                                      <---------MYB46(3)             <------ZmHOX2a(2)                                                      <---------YAB1            <---------ARR14(2)                                                    <--------ATHB1            --------->ARR14(2)                                                    <---------ICU4           ------->GAMYB                                                         <---------ATHB12          --------->MYB46(3)                                                     --------->ICU4        --------->MYB52(1)                                                 --------->ZAT14     --------->ANAC58                                                      <---------ZAT14     --------->ANAC58                                                 <-------TEIL--------->YAB1    <-------TEIL                 <----------DOF2        <---------ANAC46   <---------ZAT18    --------->ZAT18--------->YAB1--------------------->WRI1   <---------YAB1     <---------YAB1 ---------------AtSPL8 <---------YAB1              <----------DOF2   --------->GLK1(2)     ----------   agaaggtacacaacgatccgataatatgatttcttctttctaatcttcttcggctattgggtttatgagagattcagtgaacaatgatggttcaaaagtg  16881700                          <---------MYB59                          --------->TOE2(3)                   <---------TOE2(3)               ==================================HOX2a_HOX2a                                <--------               <----------DOF2                        --------->YAB1  <-----------GT1    <---------AHL20(2)               ------>ZmHOX2a(1)           <-------TEIL  --------->YAB1                <---------YAB1              --------->TOE2(3)           <------ZmHOX2a(2)      ---------->ID1    <---------ANAC46 < >DOF2    <---------GLK1(1)              --------->AGP1  --------->AHL20(2) ----------->RAV1(2)   <--   tgattcgattcgaaatcctttaagtttacctaaatcgatgttagatccatttcttagaataatatttgtttttttctcccctgtgtcttattattttata  16881800                                                                         <---------ANAC46                                                                         <---------ANAC55(1)                                                                 ------->TEIL                                                                 <---------ARR14(2)                                        --------->AHL20(2)       <---------AGP1                                       <---------WOX13(1)     --------->ANAC58                                     --------->ATHB12         --------->ANAC55(1)                                   <---------WOX13(1)         --------->ANAC46                                 --------->ATHB12             --------->ANAC55(2)                                <---------YAB1           <---------YAB1  <---------ANAC58                         --------->CCA1(2)             <---------ICU4    <---------ANAC58         <---------AHL20(2)<---------YAB1<---------AHL20(2)   --------->ANAC58   --------->ANAC46     <---------ARR14(2)        --------->ETT(1) ------>ZmHOX2a(2) -AHL20(2) <---------TOE2(3)--------->ATHB12     ---------->ID1  --------->ARR14(2) -------TEIL            --------->ARR14(2)     <-----------RAV1(1)<------ZmHOX2a(2)----------->HVH21< -------GLK1(2)        <------ZmHOX2a(1)<---------AHL20(2)   <---------LBD16 <---------YAB1         =   gattcacagaattaatgtaacattaggatatgatttgattgattaatttttgtcggattattacacggatctattacttgtgaatgtgactgtgatgact  16881900  Previous    Next  AGI:  At4g35560.1    Description:  similar to transducin family protein / WD-40 repeat family protein [Arabidopsis thaliana] (TAIR:AT5G05570.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14482.1); contains InterPro domain WD40 repeat-like (InterPro:IPR011046); contains InterPro domain WD40/YVTN repeat-like (InterPro:IPR015943); contains InterPro domain WD40 repeat (InterPro:IPR001680) Range:  from: 16881371    to: 16887024    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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