Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                             ------>ZmHOX2a(2)                                                                                            <------ZmHOX2a(2)                                                                                           --------->ARR14(2)                                                                                   ----------->RAV1(1)                                                                                   --------->AtMYB61                                                                                --------->ANAC46                                                                                <---------ALFIN1                                                                     ----------->HVH21     <---------ARR11(3)                                                                     <---------ETT(1)      --------->ARR11(3)                                                                    --------->DEAR3(2)     <---------GLK1(2)                <------ZmHOX2a(1)                        --------->YAB1    <---------ATERF1(1) <-----           --------->ALFIN1                             <------ZmHOX2a(2)--------->DEAR3(2)--------->AGP1    --------->ICU4                               --------->LBD16    --------->MYB46(3)     <---------ARR14(2)    <---------YAB1                             <---------LBD16----------->RAV1(2) --------->ANAC46 --------At4g35610                           <-----------GT1  ===============================RAV ------->At4g35610                           --------->MYB52(1) ----------->HVH21----------->RAV1(1)   gagctcatgagtagtggaggaggtctcaacaaaaccccatggagaaataaccgggtcgatcataacctgacccgacccgactccaccacaatagatcctg  13683100                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               <-----                                                                                               ------                                                          --------->MYB52(1)                   <-----                                                     ----------->GT1                           <-----                                                 <---------MYB52(1)                            <-----                                              <-----------------AGL1                           ======                                              ----------------->AGL1                           ------           --------->At4g35610               --------->MYB52(1)                                ------           <---------At4g35610               -------->P  <---------WRKY38(1)                   <-----           <---------ZAT2                  --------->ETT(2)        <---------ANAC58          <-------           --------->ZAT2                <---------ARR14(2)        <---------ANAC58         ---------         <---------ZAT18                 --------->ARR14(2)     <--------P                  ---------         --------->ZAT18               --------->LBD16   <---------WRKY12      <------ZmHOX2a(2) ----     --------->LBD16              <---------ALFIN1 --------->SPL7  <---------ANAC46       <---------ICU4    --------->LBD16            --------->ANAC46<---------------AtSPL3 <---------MYB46(3) --------->ICU4 >ZmHOX2a(1)       --------->ANAC58  <---------LBD16<---------ANAC46<XXXXXXXXXXXXXXXXXXXMIR775------- ------RAV1(1)     --------->ANAC58------->GAMYB <---------SPL7 =====================================   ttgctcccgagtgagcttgggaagccttgtagcacaacacccgggtctaccggtacgggtaaacgggtagcgttgttagagatcgatgctactgatgacg  13683200                         <---------ANAC58                  <---------ANAC46                 <------NtERF2                ------>NtERF2                <---------RAP2.3(1)                <---------ATERF1(1)                <---------ERF1                <---------DEAR4(2)               <---------ANAC46               <---------RAP2.3(3)               --------->DEAR3(1)               <---------ATERF1(2)               <---------DEAR3(1)               <---------RAP2.3(2)               --------->ATERF1(2)              <---------At4g35610              --------->At4g35610              <------NtERF2              --------->RAP2.3(1)             <---------RAP2.3(1)             <---------ORA47(2)             <---------ERF1             ------>NtERF2             <---------RRTF1(1)             <---------RAP2.6(1)             <---------ATERF1(1)            <---------ATERF1(2)            --------->ATERF1(2)            <---------RAP2.6(2)            <---------RAP2.3(3)    ------>NtERF2--------->ATERF1(1)   ----------->HVH21     <---------ANAC58 ----ANAC58 <---------RRTF1(3) ----TGA1a  <---------RRTF1(2) ----O2     <---------ANAC58 ----bZIP60(2)<---------ABI4(1) --->TGA1a  <---------DREB2C(2) ----ANAC55(1)--------->DREB2C(1) ----ANAC58 <---------RAP2.3(2) ----ANAC46 <---------ANAC46 =======================================bZIP_DOF --->O2<-----------RAV1(1) --->ANAC55(2)--------->ATERF1(1) ----ANAC55(2)--------->DEAR4(2)                                                      <------MYB46(1) --TGA2(2)  <---------ANAC58                                        --------->ANAC46  --------->MYB52(2) -->TGA1   --------->ATERF1(1)                                      --------->ANAC58  <------MYB83 -->HVH21--------->ALFIN1<---------ANAC46                           --------->ANAC58  <---------MYB46(3) ----->ALFIN1<---------DEAR4(2)          <---------GLK1(2)        <---------ALFIN1   <---------TOE2(2) ---->STF1 <---------ABI4(1) <----------DOF2   ----------->HVH21  --------->REM1(1) <---------MYB52(1) ====MYC_MYB<---------DEAR3(1)     <<<<<<<<<TBF1           <----------DOF2  ------>ZmHOX2a(1)   tgtctccgactgtggcggcggcgagttgcttcttttcttcttcgattctctgacgctcgagctttgctacacccattcctctcaacgttggtttcttctg  13683300                                                                     --------->At4g35610                                                                     <---------At4g35610                                                                     --------->ZAT2                                                                    <---------ARR14(2)                                                                    --------->ARR14(2)                                                                   <------NtERF2                                                                  --------->LBD16                                                                 --------->DEAR3(1)                                                                <---------LBD16                                                            ------>ZmHOX2a(2)                                                           <---------GLK1(1)                                                           <------ZmHOX2a(2)                                                           --------->GLK1(1)                                                          <---------AGP1--------->At4g35610                                                          <-----------ARR10                                                          --------->ARR14(3)                                                          <---------ARR14(3)                                                          <---------ARR14(2)                                  --------->ANAC58        <---------ARR11(3)                  <------ZmHOX2a(2)                       --------->ARR11(3)                 <---------ARR14(2)      <---------ZAT14  --------->ARR14(2)       <---------bZIP60(2)        --------->ANAC58       <---------ARR14(1)    ----------->HVH21             --------->ANAC46       <---------CCA1(2)   <----------ID1  --------->At4g35610       <---------ETT(1)          <---------LBD16<---------ZAT2               <--  <---------At4g35610------>ZmHOX2a(1)   --------->ZAT14--------->LBD16<---------MYB46(3)--------->ALFIN1   tttttgctgacctgtcttcgatcctggtttccgaccacgactcttcagtgtctctgtccggatctcgccggagctgttgacgacaagacgggtgtttctc  13683400                ----------->HVH21                                                     ---------------             <---------ARR14(2)                                       <---------ARR11(3)            --------->GLK1(1)                                         --------->ARR11(3)<----------DOF2            <---------GLK1(1)                                       <---------YAB1   <---------------      <---------MYB52(1)                                           ----------------------->TaNAC69(2)    ------>ZmHOX2a(2)                                             --------->YAB1    <---------GLK1(1)   <------ZmHOX2a(2)                                             --------->ICU4 --------->ANAC46  <---------ARR14(2)                                             <---------YAB1--------->HSFB2a(2)  --------->ARR14(2)                                            <---------TOE2(3)   --------->GLK1(1)  <---------ARR11(3)               <---------ETT(2)            --------->YAB1  <---------LBD16  --------->ARR11(3)             --------->At4g35610      <------NtERF2 ------>ZmHOX2a(2) -------At4g35610              ------>ZmHOX2a(2)        --------->RAP2.6(2)    <---------HSFB2a(2)   agaagatcgtttgggtttccgacggagttttgatctgttgacatgaagaagagagaagtcgccattgatgatgatcttcttctcggaactctttttagat  13683500                                                                   <---------ANAC46                                       --------->ALFIN1            <---------ANAC58                                       <---------ANAC58            <---------ANAC58                          ---------->DOF2                    <----------DOF2                        --------->ANAC58                     <---------DAG2           <---------ZAT6                        --------->ANAC58    *TSS       --------->At4g35610       <----------DOF2 >AGL15            ---------->DOF2     <---------ANAC58<---------At4g35610  ------->TEIL --AGL3         ----------->GT1<----------DOF2<XXXXXXXXXXXXXXXXXXXXMIR415  <---------CCA1(2)   agagagagagaagggaagaggtaaagacgaaagctttaagtgtgtgtgttttgtttctgctctctttttgtgtgtgtgtatctctttagtgttcatatac  13683600                                                                   <---------ARR11(1)                                                                   ------->TEIL                                                                   --------->ARR14(2)                                                                   <---------ARR14(2)         -------                                                                  <---------ARR14(1)       <---------At5g28300                                                         --------->LBD16              <---------DAG2                -------->P                        ===================================================       ---------->DOF2                      --------->LBD16       <---------CCA1(2)<-----------GT1    --------->ANAC58                <---------MYB52(1)   ----------->GT1      <----------DOF2--------    --------->ANAC58       <---------AHL20(2)     <---------------AGL15    <-----------GT1<----------  <-----------RAV1(2) <------------------------ANAC81  <---------LBD16<----------DOF2 <----------DOF2   tagctcaggcaaagtacttacctgtgtttttattttctgttatttccaggtactatatgcggataaacgtatctttatttcttttttactttttaccccc  13683700             ---------->DOF2                                                   <----------DOF2            <---------AHL20(2)                               <---------ANAC55(1)        <---------AHL20(2)                                   --------->ANAC55(1)        --------->AHL20(2)                       --------->AHL20(2)         <-----------GT1 -->ANAC46  --------->AHL20(2)                --------->YAB1 --------->ANAC55(2)                 ---- ========MADS_MADS                     ----------->GT1--------->YAB1     <---------AHL20(2)      ---- ------->AGL15<---------TOE2(3)      ---------->DOF2 <-------TEIL   <---------YAB1            <------ -GT1  --------->AHL20(2)  ---------->DOF2   <---------YAB1  <---------ANAC55(2)       <---------ZAT6   tatagtagattaaattaaagtatttttcaaaaagattagtaaagtatatcataaattcataatacgtattcttattttatactttcttagtcttattaac  13683800                                                                                       <------MYB83                                                                                       <------MYB46(1)                                                                                       <---------ANAC58                                ------->TEIL                                           <---------ANAC46                           <---------AtLEC2                                            <---------ANAC58                           <---------ANAC58                                           --------->MYB55(2)                           <---------ANAC58      --------->REM1(2)                    <---------MYB46(3) ----->TOE2(3)          ------->PIF5        <---------ANAC46                    --------->YAB1 ----->TOE1(3)          <-------PIF5  <-----------GT1                         --------->ICU4 -----GT1        <---------MYB52(1)  <-----------GT1           --------->ARR11(3)<---------YAB1   cttagatgttataaattcccttagcacttgcatgcatttttaacttatgtgtgtatagtcgtatagatgttcaatttgtcaatattagtgggtgtaagtc  13683900                                                                 --------->AHL20(2)                                                                --------->AHL20(2)                           ----------->GT1                   --------->AHL20(2)                    --------->ATHB12                 --------->At4g35610                    --------->ATHB51               --------->MYB46(3)                <-------TEIL             <---------YAB1------->GAMYB---------->DOF2           --------->AHL20(2)            --------->AtLEC2   --------->AHL20(2)      ----------->GT1     <---------TOE2(3) ---------->DOF2 <---------AHL20(2)   aagagacgttgaaaaaaatgcattatttgatgttaatatggtcatgaaaaggaacaactgaaataaataaaaaagagagtttgtaactgaaaactatgtt  13684000  Previous    Next  AGI:  At4g27330.1    Description:  SPL (SPOROCYTELESS). similar to sporocyteless [Brassica juncea] (GB:ABC87311.1); contains InterPro domain Plant transcription factor NOZZLE (InterPro:IPR014855) Range:  from: 13682084    to: 13683544    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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