Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <-----------GT1             <---------ANAC58                            --------->AHL20(2)       <---------YAB1                                    <---------AHL20(2)     <---------ARR11(3) ---------->GT1                                          --------->AHL20(1)   --------->ANAC58 ---->HVH21  <---------ANAC58      <----------DOF2    --------->YAB1          --------->ANAC58   tagggtaatgtcattgtttgcaaatggattacaaagactttttttgttgagaacaaaaataaaataccctctctgaaaacaagctctcatttttgtcagt  13407600                                                              <---------ARR11(3)                                                              <---------ARR14(2)                                                              --------->GLK1(2)                                                        --------->HSFB2a(2)                                                        <---------HSFB2a(2)                                                   --------->ANAC55(1)                                                   --------->ANAC55(2)                                                   --------->bZIP60(2)                             --                                                   <---------ANAC55(2)                      <--------                                                   --------->ANAC46                         <--------                                                   --------->ANAC58                         <--------                                                 <-----------------AGL1                   --------->ALFIN1                         ------>ZmHOX2a(1)    --------->ANAC46--------->ARR11(3)        <---------ANAC58                ------->TEIL              ----------->RAV1(1) --------->ARR14(2)        <---------ANAC58             --------->ANAC46     ------->GAMYB<------ZmHOX2a(1)                       <------ZmHOX2a(1)           --------->REM1(1)   ----------->RAV1(1) --------->ANAC58             ---------->DOF2    --   ctggaatatggctacatgaaactgttcctgatacaacagaaatacaacaggacacgttatggaaaatctgtaagacttgttgaaaagaaggagtgcgtgg  13407700                                                                --------->ANAC58                                                            <-----------HVH21                                                           --------->ANAC58                                                           --------->ANAC58                                                           --------->ANAC55(1)                                                           <---------ANAC55(2)                                                           --------->ANAC46                      --------->AHL20(2)                   --------->ANAC55(2) ---------->DOF2      <---------AHL20(2)               <-----------GT1                   <XXXXXXXXXXX ------->ANAC58 --------->AHL20(2)                  --------->YAB1            --------->DOF5.7(2) -ANAC58    <---------AHL20(2)                      <---------ICU4     <---------HSFB2a(2) -ANAC46   --------->AHL20(1)                 <-----------GT1   --------->ANAC58  <---------LBD16 -ANAC58   <---------AHL20(1)    --------->ARR11(3)<---------YAB1      --------->HSFB2a(2) ------->ANAC58 <---------AHL20(2) --------------------->WRI1   --------->ANAC55(2)--------->ANAC46   caagaaagacatatatatttatatataattccaaataccttgttcatttcaccataataacacgttacgccttctacaacgttaccctgaacgaagaaac  13407800                                                                              <----------CDC5                                                                             --------->At4g35610                                       <---------AHL20(2)                <---------ALFIN1                                       --------->AHL20(2)             --------->YAB1                              ----------->GT1                        <---------ATHB12               <---------ANAC58    <---------ANAC55(2)   <---------CCA1(2)   <---------At4g35610               <---------ANAC58   <-------TEIL     ------->TEIL     --------->ANAC58         --------->YAB1     ---------->DOF2     --------->ANAC46    --------->ANAC58    --------->AHL20(2)    --------->ANAC58    <-----------GT1      --------->WOX13(1)       <-------- XXXXXXXXXMIR870          --------->ANAC58 <---------AHL20(2)<----------DOF2--------->DEAR3(1)-------   acagatttatatcatatgcgtacttagcaagaaagttacatataatttatacgaacctcgtttctttggcaatcaacaccgctgagtttcttaaacacct  13407900                                       --------->ALFIN1                                      --------->LBD16                                     <---------ANAC46                           <---------MYB52(1)                          --------->LBD16                         <---------ANAC55(2)                         <---------ANAC46              <---------DAG2---------->DOF2                   <---------ANAC58        --------->REM1(2)       <---------DAG2    --------->ANAC55(2)                  <---------ANAC58       <---------ANAC46  <---------ANAC58    --------->ARR14(2)                    --------->ARR11(3)     <---------ANAC46  <---------ANAC58    <---------ARR14(2)             --------->At4g35610           <---------ANAC58 -ALFIN1<----------DOF2 ------>ZmHOX2a(2)            <---------At4g35610           <---------ANAC58 -->ANAC46    <----------DOF2--------->DAG2         --------->GLK1(2)      --------->AtLEC2       <--   catagagtgcctttcgctttttctgatccgtaaagcatcccgtggagttggaagaagctgaatttcttgttgaatccatggagagtcgtgtagatagaaa  13408000                                                                          ===========================                                                                          ------>ZmHOX2a(2)                                                                         ============================                                                                         <------ZmHOX2a(2)                                                                        --------->ARR11(3)                                                                        <---------ARR14(2)                                                          ----------->HVH21<----------DOF2                                                    <---------ZAT18     <---------AGP1                                                <---------WRKY45        --------->AGP1                                                <---------WRKY12        <---------ARR11(3)          ---------->DOF2                       <---------WRKY38(1)     --------->ARR14(2)        --------->ANAC58                   <------------CBF    --------->ANAC55(2)              <----        --------->ANAC58             ---------->DOF2------->GAMYB      <---------CCA1(2)        ----- --------DOF2                --------->YAB1<---------GLK1(2)   <---------ANAC55(2)  ----------->GT1   ctttttagccaagaaagagagaacaaatcgatgatcaaaaaaagagattgtcaacgcgctctgatacctattcagatctttgagacagggaaaacatata  13408100                          <---------AHL20(2)                          --------->AHL20(1)                          <---------AHL20(1)                    --------->ANAC58                    --------->ANAC55(2)            ---------->DOF2      ------>ZmHOX2a(1)    ---------->DOF2 --------->ANAC58                                                  <----------DOF2   <------ZmHOX2a(1)<---------ANAC55(2)     <-------MYC3                  <----------DOF2 =========HOX2a_HOX2a     --------->AHL20(2)------->MYC3             <---------MYB52(2)  <-----------HVH21 =========HOX2a_HOX2a <---------AHL20(2) <---------DOF5.7(2)     <-----------TGA1  <---------AHL20(2) -----AHL20(1)      ----------->GT1---------->DOF2              --------->YAB1     <-----------GT1 ---->AHL20(1)  ----------->GT1 --------->TOE2(3)          ------------>CBF     <---------ICU4-------   tattaggaaagaccgaaagagtaagtaatttattcctcaaagtaaacgtgtttatgcagaacacaatcgtcactaactttgctaattactttgtcaactc  13408200                                           --------->ICU4              --------->AtMYB61    <---------MYB46(3)             --------->MYB46(3)  <------------CBF           --------->WOX13(1)    <---------MYB52(1)         <------ZmHOX2a(2)     ---------->DOF2        <---------ARR14(2)     <---------LBD16 ----------->HVH21     --------->MYB52(1)  <-----------RAV1(1)                 <---------ICU4 ------->GAMYB------->GAMYB --------->ARR14(2)  <---------ANAC58          ------------>CBF --------->GLK1(1) -->ZAT6  <---------WRKY12 <---------GLK1(1)    <---------ANAC58   ----------->GT1         <---------GLK1(1)   taactgacaaagtcaaccacaagactaacaaatccgattgttgtaatgttgcatccggttcgatcaaatcggtgatttcaattttgacttcagaattcag  13408300                          <---------ANAC58                          <---------ANAC58                          <------MYB46(1)                          <------MYB83                        <---------ANAC46                     <-----------RAV1(1)                   <------MYB83                   <------MYB46(1)                   <-----------GT1              --------->ATHB12                       --------->ZAT6                  <-------TEIL <--             <------ZmHOX2a(2)          <-----------GT1                    <---------YAB1      <-----             <---------ATHB12      <----------DOF2 <-----------GT1     <----------DOF2         <-----       <---------ARR14(2)<---------MYB46(3)       --------->YAB1<---------MYB52(1)<------ZmHOX2a(1) -   actagagcatacccgatcatttggtgttgggttctctcttttttgctctctattatcacttcatcagtttgctctttattaataggattcatgtctcaag  13408400                       <------ZmHOX2a(1)                                                     --------                      ----------->GT1                                                        --------        --------->ARR11(3)                                                                   --------        --------->ARR14(2)                         ----------->GT1                           --------        <---------ARR11(3)                     <------ZmHOX2a(1)                         --------->ANAC58       <---------CCA1(2)----------->GT1     <-----------RAV1(2)                <----------DOF2<------ ------P<---------ARR14(2)       --------->At4g35610                      <----------DOF2--------->ANAC46 ----TOE2(3)   <---------At4g35610    --------->YAB1            <---------GLK1(2)        --------->ANAC58 ----TOE1(3)   --------->At4g35610   <---------ATHB12           <---------ARR14(2)<---------AHL20(2) -------->MYB52(2) <---------ANAC46--------->WOX13(1)           --------->ARR14(2)--------->AHL20(2)   gttagtagtatatctacagatgcgaggagaaaatcagcaatcaaaatcaggagtagcaaaaatacagatttgttttctttacttttaattcacacaagta  13408500  Previous    Next  AGI:  At4g26560.1    Description:  CBL7 (CALCINEURIN B-LIKE 7). Identical to Calcineurin B-like protein 7 (CBL7) [Arabidopsis Thaliana] (GB:Q9SUA6;GB:O65578); similar to ATCBL3 (CALCINEURIN B-LIKE 3) [Arabidopsis thaliana] (TAIR:AT4G26570.1); similar to Os03g0626800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050704.1); similar to calcineurin B [Pisum sativum] (GB:AAM91028.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN72862.1); contains InterPro domain Calcineurin B protein (InterPro:IPR015757); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Recoverin; (InterPro:IPR001125); contains InterPro domain Calcium-binding EF Range:  from: 13406739    to: 13407979    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26570.1    Description:  ATCBL3 (CALCINEURIN B-LIKE 3). Identical to Calcineurin B-like protein 3 (CBL3) [Arabidopsis Thaliana] (GB:Q8LEM7;GB:O81447); similar to CBL2 (calcineurin B-like protein 2), calcium ion binding [Arabidopsis thaliana] (TAIR:AT5G55990.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN72862.1); contains InterPro domain Calcineurin B protein (InterPro:IPR015757); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Recoverin; (InterPro:IPR001125); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 13408428    to: 13411076    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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