Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                       ------>NtERF2                                                                                     --------->At4g35610                                                                                     <---------At4g35610                                                                                    --------->RRTF1(3)                                                                                    --------->RAP2.3(2)                                                                                    --------->RAP2.3(3)                                                                                    --------->DEAR3(1)                                                                                   --------->RRTF1(1)                                                                                   --------->ATERF1(1)                                                                                   <------NtERF2                                                                                   --------->DEAR4(2)                                                                                   --------->ORA47(2)                                                                                   --------->ERF1                                                                                  <---------RAP2.6(1)                                                                                  <---------ATERF1(1)                                                                                  --------->ABI4(2)                                                                                  ------>NtERF2                                                                                  <---------RRTF1(1)                                                                                  <---------ORA47(2)                                                                                  <---------RAP2.3(1)                                                                                  <---------DEAR4(2)                                                                                  <---------ERF1                                                                                 --------->DEAR3(1)                                                                                 <---------RAP2.3(2)                                                                                 <---------DEAR3(1)                                                                                --------->RRTF1(1)                                                                                --------->RAP2.6(1)                                                                                --------->ERF1                                                                                --------->RAP2.3(1)                                                                                --------->ATERF1(1)                                                                               <---------DEAR4(2)                                                                             <------------AtMYB77                                                                             --------->ATERF1(1)                                                                             --------->MYB46(3)                                                                             --------->DEAR3(2)                                                                            --------->MYB52(1)                                                                           --------->ARR14(2)                                                                          <------ZmHOX2a(1)                                                                    --------->At4g35610            --                                             ----------->RAV1(2)    <---------At4g35610            --                               <---------------AtSPL8               ----------->RAV1(2)    --------->TOE1(2)                               --------------->AtSPL8       <---------ARR14(2) <---------ATERF1(1) <-         --------->DAG2        --------------->AtSPL3   <-----------RAV1(2)<---------ARR14(2)  <----- ------->YAB1          <---------At4g35610   --------->ANAC55(2)  --------->REM1(1)--------->RAP2.3(1) ->YAB1 ---------->DOF2--------->At4g35610 <-----------GT1  --------->ARR14(2)--------->DEAR3(1)  ---   atcaaaatgaaaaaggagtttagatagctcagagaagtaccaattttacctgatcacttcaggttccttcatctgaggaaccggcgccgctaaactagga  13405900                         <---------ARR14(2)         <-----------HVH21        --------->At4g35610  --------->HSFB2a(2)    --------->ARR14(2)  <---------HSFB2a(2)   ------>MYB46(1) ------->GLK1(2)        ------>MYB83 <-------TEIL                                 --------->GLK1(2) < ------->ARR14(2)    ----------------->AGL2                       <---------At4g35610     --------->ANAC58 --------ARR14(2)  ------>MYB83   <---------At4g35610    <-------TEIL             --------->ARR14(2)- -ZmHOX2a(1)       ------>MYB46(1)--------->ZAT2    --------->HSFB2a(2)           <---------ARR14(2)- ------>GLK1(1)  <---------MYB59  <---------ZAT2 ------>ZmHOX2a(1)--------->At4g35610     --------->ANAC58   aaatccagaagcgtcaagaccgaaccaaatccagacagctgcataaacatccttctgggtacatgtacagccgagaccgaagagaatccaacacgactaa  13406000                          --------->LBD16                         --------->LBD16                        <---------LBD16                       >>>>>>>>>>E2Fd                       >>>>>>>>>>E2Ff               <-------TEIL                       >>>>>>>>>>E2Fc            ----------->GT1                       >>>>>>>>>>E2Fe           --------->DAG2              <---------ANAC58                ---------->DOF2              <---------ANAC46             --------->AHL20(2)                                    <---              <---------ANAC58            --------->AHL20(2)       --------->AtMYB61            ----- ---------HSFB2a(2)    >>>>>>>>>>E2Fb <---------AHL20(2)       --------->DEAR3(1)         ----------- -------->HSFB2a(2)    >>>>>>>>>>E2Fa --------->AHL20(1)       --------->MYB46(3) <---------LBD16---- ----->ZmHOX2a(1)     <-----------GT1 --------->AHL20(2)      <---------At4g35610--------->MYB52(1)<-   tcctagaaacgctgttccttgattttcccgcgctgataaataaaataaaaaaggttcaatctccagcgaccatactctcaaatcgacggagatagaaaat  13406100                            ---------->DOF2                         --------->TOE2(3)                         --------->TOE1(3)                       ------->TEIL                                                      <------NtERF2                   <---------ARR11(1)                                                  <---------DEAR3(1)                   <-----------ARR10                        --------->GLK1(1)         <------NtERF2                   ------->TEIL                  ---------->DOF2                      --------->ATERF1(1)                   --------->GLK1(2)            ------->GAMYB                        <-----------HVH21    --------->GLK1(2)  -------->P              --------->ANAC58                      <---------ATERF1(1) ------ICU4        --------->ARR14(2)          --------->ANAC58                      ------>NtERF2 ---->ICU4         <---------ARR14(2)        --------->MYB52(1)                     --------->DEAR3(1) >GT1           --------->ANAC46            --------->TOE1(2)                    --------->DEAR3(1) ----->YAB1  --------->TOE1(2)             --------->MYB46(3)                  <---------ATERF1(1) --------YAB1--------->TOE2(2)             ------>ZmHOX2a(2)<---------GLK1(1) --------->DEAR3(1) ----   tatgagattccaaaacatacgaatctaccttaaggccatggatgatccaacgaaaggaagagaaatctccatagccatcgccatcgccgtcgtcgtcaac  13406200                                                                                                   --                                                                                                  ---                                                                         --------->AtMYB61        ---                                                                        --------->MYB46(3)       ----                                                                       ------>MYB83              <---                                                                       ------>MYB46(1)          -----                                                                      --------->ANAC46          -----                                                                     --------->MYB46(3)         <----                                                                     <---------MYB55(2)        <-----                                                                     ------->GAMYB             <-----                                                                    --------->DEAR3(2)       --------                                                                    --------->MYB46(3)     <---------                                                                   -------->P           ------->TEIL<                                                           <---------LBD16      --------->TOE2(3)<---        <<<<<<<<<TBF1                              *TSS --------->At4g35610  --------->ZAT14<--------     <<<<<<<<<TBF1                            --------->CCA1(2)    --------->ANAC58   --------->ZAT18 --->GAMYB <<<<<<<<<TBF1           ---------->DOF2----------->ARR10--------->ANAC58   <---------ZAT18   agtcttcttcttcttcttctatggatagtggataagaaaaagagtgagagatgagattagctacggagcaacccaccactaaacttagtggacctgtggg  13406300                                                          ------>ZmHOX2a(2)                                                         <------ZmHOX2a(2)  <---------ALFIN1                                      <---------ARR11(3) ------->MYB46(3)                                       <---------AGP1 ------>TCP23                                           --------->ARR14(2) ------>TCP15(2)                                        --------->ARR11(3) ----->PCF2                                      <---------ANAC58 ------TCP20                                 <---------DOF5.7(2) ---->TCP15(1)                             --------->DOF5.7(2) ---->TCP20                                --------->At5g28300 -----PCF2                          --------->ANAC58    <---------ARR14(2) ----TCP15(2)                       --------->ANAC46    --------->GLK1(2) ----TCP23                      --------->CCA1(2)<---------ANAC58 ->ALFIN1                      <---------ARR14(2)<---------ANAC55(2)   <----------DOF2 --RAV1(1)    ------->TEIL     --------->ARR14(2)>>>>>>>>CAMTA3  ---------->ID1 ---------ALFIN1       ----------->GT1<---------SPL7    <-----------ARR10                      ------ ------TCP15(1)      ----------->GT1--------->ANAC58   <------ZmHOX2a(1)                  <---------AHL20(2) ---HVH21  <---------YAB1   --------->AHL20(2) <---------ANAC46 <-----------GT1  <---------AHL20(2)   acccacactgcttatgaattttgttgtgaaaaaaatacgcgctacggtaacgcgtgaggatctatttttccttctttttttgtttattttgtttattttg  13406400                       --------->LBD16                                             --------->ARR11(3)                      --------->TOE1(2)                               --------->ATHB12       <---------LBD16--------->TOE2(2) <---------ANAC58             <------ZmHOX2a(2)   <-------TEIL      --------->DEAR3(2) <---------ANAC58             <---------ATHB12        <------- ----->GT1      <------ZmHOX2a(2)  <---------ICU4                    <---------YAB1<---------ARR11(3)   ttaaatacatccggttcgatcaaaccggcgatttcaattttgacttgagaattcagattagagcatagccgatcattggtgttgagttcttctctctttt  13406500                                                                                ----------->GT1                                                                           <---------ANAC46                                                                       <---------At4g35610                                                                       --------->At4g35610                                                                  ------>ZmHOX2a(2)                                                                  ====================HOX2a_HOX2a                                                                 =====================HOX2a_HOX2a                                                                 --------->CCA1(2)                                                                 <------ZmHOX2a(2)                                                                <---------AGP1 <------ZmHOX2a(1)                                          <---------AtLEC2      --------->ARR14(2)               ----                                     <----------DOF2            --------->AGP1----------->GT1   <----  --------->HSFB2a(2)               <---------ANAC58            <---------ARR14(2)              -----  <---------HSFB2a(2)               <---------ANAC58            <---------ARR11(3)         --------->MYB52(1) ---DOF2       <----------DOF2  <---------MYB52(1)              --------->ARR11(3)     --------->YAB1   ttttctagcagtttgccctttcaatgctctagcagtttgcttttacatgtctcaagattagtagtagatctacagatgcgaggagaaaatcatcaacgga  13406600            --------->ANAC58            --------->ANAC46 <---------ARR11(3)            --------->ANAC58 --------->ARR11(3)                                --------->YAB1          --------------->AGL15                                          --------->ANAC55(2)          <---------------AGL15                                          <---------ANAC55(2)       <-----------GT1       --------->ARR14(3)                         <-------TEIL ---------->ID1              --------->GLK1(2)                      <---------YAB1 ----->GLK1(1)               <---------ARR14(3)                   <---------ICU4 -----ARR14(2)         ----------->RAV1(1)                        --------->YAB1 ---->ARR14(2) ---------->DOF2                                --------->AHL20(2)          --------->YAB1   tttgttttttttccacacaaaggaacaacaaaatcttgaaaatgttgagagagattgaaaacaaataaacatgatacataatcagaaaacaaacacaatt  13406700                                                     <---------ANAC58                                                     <---------ANAC46                                                     <---------ANAC58                                               <---------ALFIN1                                         <---------ARR14(2)                                       ---                                         --------->ARR11(3)                                       ---                                         <---------ARR11(3)           <---------LBD16             ---                                         --------->ARR14(2)         <---------ZAT2             <-----                                        --------->GLK1(1)           --------->ZAT2             ------                                     <---------TOE1(2)           ---------->DOF2        <---------GLK1(1)              <---------At4g35610    <---------TOE2(2)        --------->ZAT6            --------->GLK1(1)           ------>ZmHOX2a(1)        <-----------RAV1(2)  <---------ZAT6    --------->GLK1(1)  -------   cccaaacagtctcctctgctaatatgctattgtttttctcaggtatcttccacttgcgagtgtaacacaaagctcggaaatgtagttgtgatatccctgc  13406800  Previous    Next  AGI:  At4g26555.1    Description:  immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein. similar to immunophilin / FKBP-type peptidyl-prolyl cis-trans isomerase family protein [Arabidopsis thaliana] (TAIR:AT4G19830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45186.1); contains InterPro domain Peptidyl-prolyl cis-trans isomerase, FKBP-type; (InterPro:IPR001179) Range:  from: 13404471    to: 13406251    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26560.1    Description:  CBL7 (CALCINEURIN B-LIKE 7). Identical to Calcineurin B-like protein 7 (CBL7) [Arabidopsis Thaliana] (GB:Q9SUA6;GB:O65578); similar to ATCBL3 (CALCINEURIN B-LIKE 3) [Arabidopsis thaliana] (TAIR:AT4G26570.1); similar to Os03g0626800 [Oryza sativa (japonica cultivar-group)] (GB:NP_001050704.1); similar to calcineurin B [Pisum sativum] (GB:AAM91028.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN72862.1); contains InterPro domain Calcineurin B protein (InterPro:IPR015757); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Recoverin; (InterPro:IPR001125); contains InterPro domain Calcium-binding EF Range:  from: 13406739    to: 13407979    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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