Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                 ------                                                                                       <---------AHL20(2)                                                                                       --------->AHL20(1)                              --------->YAB1                                           --------->AHL20(2)                              <---------AtLEC2                                  <---------TOE2(3)                  <---------ZAT6   <---------YAB1         --------->CCA1(2)   <---------AHL20(2)             --------->YAB1 <---------YAB1 <---------TOE2(3)                 <---------YAB1  <------- >GT1       <---------YAB1  --------->AtLEC2  --------->ARR11(3)        <---------GLK1(2) <---------AHL20(2)   aaacacattgttttatcatagtgttttatcatgcatgatgcttctaacgatattgtttagataggcattaactagaatttttaatgaaattttttattct  13380000                                                          <----------DOF2                                <---------AHL20(2)        ------>ZmHOX2a(1)                           --------->AHL20(1)         <-----------GT1          <----------DOF2   <-----------HVH21       <---------AHL20(1)    --------->AHL20(2)    <---------ANAC55(2)  ----------->GT1          --------->ARR11(3)   <---------ICU4  ------>ZmHOX2a(1)                <--- --->TOE2(3)               <---------ARR11(3)  --------->ICU4  --------->TOE2(3)             -------- --YAB1         ------>ZmHOX2a(1)<---------AHL20(2)  <---------CCA1(2)<-------TEIL  <---------TOE2(3)   taaaatgtcaaataagtcctatattgaaatattttttaatggtatactaatttttatatccttttcctaaaatacataagacttttaagtttgttcaatt  13380100                   <---------ATHB12                     --------->ANAC58        <-----------HVH21                               --------->ANAC58    <---------ARR14(2)                                 --------->DAG2    --------->GLK1(2)                                 ---------->DOF2    <-----------ARR10   --------->YAB1            --------->MYB59                              ------    --------->ARR14(2) <---------ATHB12      <---------AHL20(2)                             --------- <---------ANAC55(2) --------->WOX13(1)      --------->AHL20(2)                             --------- --------GT1----------->RAV1(2)             --------->AHL20(2)                           --------->ARR14(2) ->WOX13(1) <---------ANAC46      <---------CCA1(2) <------ZmHOX2a(1)                 --------->ANAC46   aacaagtatctgtcccctgtaatcaatcaaaaccttttatctcagatttaattaggaaaagccacttgttaagaagaaggaatattaaacgaaaacgcat  13380200                                                            --------->PCF5                                                            <---------TCP15(1)                                                            --------->PCF2                                                     <---------ANAC55(2)                              <----------DOF2        --------->ANAC46                             <---------ANAC58        --------->ANAC58                        --------->ARR14(2)           --------->ANAC55(1)                        <---------ARR14(2)           --------->ANAC58                        <---------GLK1(2)       --------->ANAC46   <---------ICU4------>MYB46(1)                      ----------->ARR10         --------->ANAC58   --------->YAB1------>MYB83 ->TEIL         --------->MYB46(3)    <---------ARR11(3)    <---------TCP20    <---------MYB59 >ANAC58  --------->TOE2(3)  <---------ANAC58   <----------ID1 <---------ALFIN1--------->AtMYB61 >ANAC58  <----------DOF2--------->CCA1(2)      --------->ANAC58  <---------ATHB12             ------   gtagttttcaaactttaatccaccgagatttgctttactagttcttcaaaacgacacgcatggtcccactcattacaaaaaccaaaccccattatgcaaa  13380300                                           ----------->RAV1(1)                                        --------->ANAC58                    <---------AHL20(2)                                        --------->ANAC58                   --------->AHL20(2)                                    <-----------GT1                     ------>ZmHOX2a(1)                               <----------DOF2                      <-----------GT1             -----       <----------DOF2         <---------DAG2         ---------->DOF2<-----------GT1   <---------ICU4 ---->DOF2               <----------DOF2--------->ANAC46       <---------MYB52(1)--------->TOE2(3) --   agctctcttcttttgcccaaactctcgctttcccttttttacacacaacaaaaaacaaaagttctgttattttcctatttaatccataaccattacacat  13380400                                                                                       --------->ATHB12                                                                                       <---------ICU4                                                                                      <---------ATHB12                                                                        --------->DEAR3(1)                                                                       <------------AtMYB77                                                                       --------->MYB46(3)                                                                <-------GAMYB    --------->ANAC46                                                                <---------At4g35610   --------->ICU4                                                                --------->At4g35610----------------->AGL1                                                             --------->ZAT14     --------->ANAC58                                                             <---------ZAT14   ---------->DOF2                                          --------->TOE2(3)  --------->LBD16  --------->ARR14(2)                                         --------->ANAC46   ------------>AtMYB77 --------->ANAC58                                       <-----------GT1      --------->DEAR3(1)<---------ARR14(2)                                    <---------ARR11(1)     --------->ANAC46 --------->ANAC58                 *TSS<---------ANAC55(2)-------->P       <---------ALFIN1   --------->ANAC58              <---------WOX13(1)    <---------ARR14(2)   --------->AtMYB61  --------->LBD16            --------->ATHB12        --------->ARR14(2)  --------->MYB46(3)  --------->ANAC46         <----------DOF2            <-----------ARR10  ------>ZmHOX2a(1)------->GAMYB<-----------HVH21     <-----------GT1 --------->ANAC55(2)------->TEIL------>ZmHOX2a(1)  <---------MYB55(2) ---->GLK1(1)<------------CBF --------->ANAC58<---------At4g35610      --------->DEAR3(2) ---------->CBF --------->YAB1--------->ANAC58--------->At4g35610      --------->ATERF1(1)   ttccaattttcctttcattgatcacataactcatgccaaatctacctcatcttcctcctccaccgcagttgcaaccgcccgaaacgccatcatgggaaac  13380500                                                              --------->ANAC58                                                         --------->ANAC46                                                         --------->ANAC58                                                         --------->ANAC58                                                     --------->ANAC46                              <-                                                     --------->ANAC58                           -----                                                     --------->ANAC58                           -----                             --------->ANAC58       <---------ZAT18                           <------NtERF2                             --------->ANAC58       --------->ZAT18                           <------                           <---------ALFIN1       <---------ZAT18                             -------                           --------->AtMYB61      <---------ZAT14                            --------                          --------->MYB46(3)      --------->ZAT14  --------->ZAT2            --------                        --------->ARR14(2)  ----------->RAV1(1)----------->RAV1(1)           --------                 --------->ANAC46           --------->AtMYB61 --------->ANAC46           --------->ANAC58              --------->ARR14(2)           --------->ANAC46   --------->ANAC58           --------->ANAC58              --------->ZAT14--------->ANAC46  ---------->DOF2<---------ALFIN1         ---------->DOF2   accatcgtctgtatggtatactccaagaaccacaccatggagaacaccacagagcacacaatccacaccagttggccaaatggtcttaacaaagccagca  13380600                                                                                                    <                                                                                                   <-                                                                                                 <---       <-------TEIL                                                                          <-------GAMYB <---------MYB52(1)                                                                         --------- --------MYB46(3)                                                                           <-------- ------->AtMYB77                         ----------->GT1<---------At4g35610               <---------ANAC46 ---->MYB52(1)                        --------->CCA1(2) --------->At4g35610               <---------ANAC58 ---ZAT2                        <------ZmHOX2a(1)     --------->SPL7                 --------->CCA1(2) -->ZAT2                     --------->LBD16         <---------MYB52(1)             --------->ARR14(2) ->ANAC46                --------->ARR14(2)         <-----------HVH21               <---------ARR14(2) ->ANAC58   ------->GAMYB<---------ARR14(2)         <-----------TGA1            <---------LBD16  <--- ->ANAC58--------->MYB52(1) --------->DEAR3(1)     --------->ANAC46    <------ZmHOX2a(1)  <---------ANAC58   acggttagattcaacggtcttgatgcagagccgaggaaagatagggtgattctccgtcagccaaggagtagcaggaccagtctctggatatggtgtgttg  13380700       <---------MYB52(1) <---------ARR14(2) --------->ARR14(2)                                           <---------ANAC46 ---------MYB52(1)              <----------DOF2               <---------ANAC58 --------DEAR3(2)           <---------CCA1(2)                 <---------ANAC58 ------ANAC46             <---------ANAC58               <---------ZAT6 >ALFIN1  <---------ANAC46<---------ANAC58          --------->YAB1 ---RAV1(1)          <----------DOF2               <---------YAB1              --------->YAB1 ------LBD16        <---------DAG2               <----------DOF2 <---------------------WRI1   ccggtttctgttttgtgttcagccttttgcttatcttttttgcgattgccactttgatagtgtttcttgcgattagaccaagaatacctgttttcgacat  13380800                                --------->O2                                <---------TGA1a                                --------->TGA1a                                <---------O2                                =========================MYC_MYB                    <------ZmHOX2a(2)                   --------->ARR14(2)                 --------->ANAC58   --------->LBD16               --------->ANAC46 --------->ANAC46             <---------ALFIN1   --------->ANAC58                                        --------->YAB1            ------>MYB46(1)     --------->ANAC58                                  --------->TOE2(3)            ------>MYB83      <---------ALFIN1                                    --------------->AGL15          --------->AtMYB61  <---------REM1(2)                                    --------->TOE1(3)   --------->ANAC58<---------ARR11(3)                                             <---------------AGL15   --------->ANAC46--------->ARR11(3)                                      <-----------GT1   --------->ANAC58<---------ARR14(2)<------NtERF2                ----------->GT1--------->ZAT6 ---------->DOF2 --------->ANAC58 <---------LBD16------->GAMYB <---------ZAT2   -------->P =========================================bZIP_DOF<---------------------WRI1 <---------MYB52(2)------   cccaaacgcaaacctacacacgatctacttcgacacgccggagtttttcaacggcgatttgtccatgctggtgaatttcactaaccctaataagaagata  13380900  Previous    Next  AGI:  At4g26488.1    Description:  other RNA Range:  from: 13380353    to: 13381633    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g26490.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT5G56050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN70940.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO66828.1); contains InterPro domain Harpin-induced 1 (InterPro:IPR010847) Range:  from: 13380417    to: 13381448    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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