Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                           <---------ATHB51                                                                                         --------->AHL20(2)                                                                            --------->ANAC58                                 <-----------GT1                            --------->ANAC46                            --------->YAB1                                  --------->ANAC58        <                            --------->AHL20(2)                    ---------->DOF2        --------->ICU4                       --------->AHL20(2)                      --------->TOE2(3)    <---------TOE2(3)            --------->TOE2(3)--------->AHL20(1)     <---------AHL20(2)    <-----------GT1<---------AHL20(2)   actagtagctaatacctttgtacattgaaataatattactacttgtgtttctaaatatttgatattcttaaagttttcacacaattaagaaataattcat  13370700                                                                  <---------ICU4                                <---------AHL20(2)               --------->AHL20(2)         ---------             <-------TEIL      --------->AHL20(2)            ------->TEIL     <---------AHL20(2)  <--      <---------YAB1         --------------->AGL15        <---------YAB1   --------->YAB1--------->YAB1 ----------->GT1           <---------YAB1        <-----------GT1 <---------AHL20(2)  --------->MYB46(3) ---------AHL20(2) <-----------GT1           <---------TOE2(3) --------->YAB1 --------->AHL20(2) ----   atttagttataaatatacatttaaccattttcatttaatagttttttaagtttacaattcatgaatattaattacaaaaattatataacaaacataaaga  13370800                              ----------->GT1                             <---------HSFB2a(2)                             --------->HSFB2a(2)                          <---------ARR11(3)                          --------->ARR11(3)                          --------->GLK1(2)                         --------->RVE1(1)                ----------->GT1                                                    <---------ATHB12 ->DOF2 <---------YAB1 --------->AHL20(2)            ---------->DOF2      ---------->DOF2 -----TEIL     --------->ANAC58      <---------AHL20(2)              ----------->GT1 ----->CCA1(2) --------->ANAC58      --------->AHL20(2)      ----------->GT1----------->GT1         -   tacaatatttatgaaacaaggaaaaaaaaatctagaaaattaaacttttaaaaacaaaagaagtagtaaaatggagaaaagtcaaatgaagatggagagt  13370900                                                                  --------->HSFC1(2)                                                                  <---------HSFB2a(1)                                                                  <---------HSFC1(2)                                                           <---------ANAC55(1)                                                           --------->ANAC55(2)                                                           <---------ANAC55(2)                                                           <---------ANAC46                                                           <---------ANAC58                                                           <---------bZIP60(2)            <---------AHL20(2)                            <-----------------------TaNAC69(2)           --------->AHL20(2)                       --------->LBD16               --------->ANAC58         --------->YAB1                            --------->ANAC55(2)            --------->ANAC58       --------->AHL20(2)         <---------ANAC58 --------->ANAC58               --------->ANAC46      --------->YAB1              <---------ANAC58 --------->ANAC58     <---------At4g35610    --------->AHL20(2)     --------->AHL20(2)     <-------TEIL    --------->At4g35610        -------- ---------->GT1           <---------ATHB12  ---------->DOF2<---------ANAC58    <---------REM1(2)  <--   ttgggttaaaataataaatagatgacaaatgaattagcgttttttaaaaagatgcgcaattacgtggaagcttcagcattcttcacgcccattacaaaag  13371000                                            <------ZmHOX2a(2)                                           <---------ARR14(2)                                           <---------ARR11(3)                                           --------->ARR14(2)                                ------------>CBF                                       --------->ANAC58                               --------->YAB1------>ZmHOX2a(2)                         --------->ANAC58                               <-----------GT1                                         --------->ANAC46                              <---------YAB1--------->CCA1(2)             ------>ZmHOX2a(2)   <<<<<<<<<TBF1         <---------ICU4    --------->AGP1                 *TSS     --------->ANAC58 -->DOF2--------->HSFB2a(2) --------->YAB1 <---------AGP1               --------->ARR11(3) --------DOF2        --------->AHL20(2)    --------->ARR11(3)      <----------DOF2 --------->ANAC58   ctttcttcttctcaaacatctgattaaaaattataacaataaacagatctgtgtgattttgtgttttgacttttgatctcgagacaaacaagaaactaaa  13371100                                               <---------ANAC58                                               <---------ANAC58                                             <---------YAB1                                            <---------GLK1(2)                                          --------->ICU4                                          <---------YAB1      <<<<<<<<<TBF1              <---------ANAC58                                          --------->YAB1   <-------TEIL <----------DOF2  <---------ANAC58                                 <----------DOF2  <---------ARR14(2)   <---------DAG2<---------ANAC58                             <---------DAG2  <---------ARR11(3)   <----------DOF2    ------>ZmHOX2a(1)                       ------>ZmHOX2a(1)  --------->ARR14(2)  <---------DAG2 <---------ANAC58                          ---------->ID1 <---------GLK1(2) <-----------GT1<----------DOF2  ----------->HVH21<---------ANAC46  <<<<<<<<<GATA-1   acaggttcttcttctcttcttttacctttttgtttgctttcgtcctgattcttgtgacatttattgtctgatgtgaaacttgtcctttatctattatgcc  13371200                                        ------>ZmHOX2a(2)                                       <------ZmHOX2a(2)                                       --------->CCA1(2)                                      <---------ARR11(3)                                      --------->ARR11(3)                                      --------->AGP1               <-----------GT1        --------->ARR14(2)              <-----------GT1         <---------AGP1          <---------YAB1 --------->ARR11(3)         --------->ARR11(3)         <---------AHL20(2)     ------->TEIL        --------->GLK1(2)                           -----       <---------YAB1    <---------AHL20(1)     --------->YAB1                                 ------     <---------AHL20(2) <---------CCA1(2)      <---------YAB1                           --------->ANAC58    <---------YAB1 --------->ANAC46   <---------ARR14(2)            >>>>>>>>>TAC1       --------->ANAC58   tcgatttttatttttatttccccctcatatattgaatctagatctggttttgataatcttggaatcagacagtgtttgtatatttcggacaaacaagacg  13371300                                                                                                 ----                                                                                                 ----                                                                                              -------                                                                                          --------->ZAT14                                                                                          <-------TEIL                                                                                          <---------ZAT14         <---------ANAC58                                                                --------->ALFIN1         <---------ANAC58                                                              <------MYB83 <       ------>NtERF2                                                                   <------MYB46(1)    --------->ZAT2                            --------->ARR11(3)                       --------->At4g35610    <---------At4g35610      <---------ARR11(3)   <---------CCA1(2)                    <---------At4g35610    --------->At4g35610      --------->ARR11(3) ------>ZmHOX2a(2)                     <---------AtMYB61  --------->DAG2             <---------GLK1(2)<---------ARR11(3)                      --------->ALFIN1 ---------->DOF2    --------->ANAC58  <---------LBD16                                 <---------DEAR3(1) ------>GT1         --------->ANAC46  <---------ANAC46                          <---------O2  ------- ----->GT1          --------->ANAC58 <---------LBD16                    --------->MYB52(1)--------->ZAT18   ttaaaaagctgccttgtcttacaagaaactagattttgtctcggggtcgatcttatctccaaacagagagaaattaacagagacatgggaggtgcagtga  13371400                                                                  --------->AtLEC2        --------->ANAC58                                                                <---------ANAC58          <------NtERF2                                                                <---------ANAC58          --------->ANAC58                                                                <---------ANAC46         ----------->RAV1(1) ----->ANAC58                                              ---------->DOF2              --------->PCF2 ----->ANAC58                  --------->LBD16        <------ZmHOX2a(2)         <------NtERF2       < ---->TGA1                    <---------HSFB2a(2)     <---------YAB1       --------->ANAC58         - ---------GLK1(1)             --------->HSFB2a(2)    --------->ARR11(3)    --------->ANAC58<---------ALFIN1 ---->HVH21      ---------->DOF2     ---------->DOF2 <---------ARR11(3) ------->GAMYB  --------->ZAT18   cgaaatctgaaactctgcaaaaagaatgggttccagagacaaagttggaggctaagatcatagaagccgtgcaacgcagggcatcgaggggcaccacaat  13371500                                                                                                   <-                                                                                                  <--                                        --------->YAB1                                    --------->ARR14(2)                                   <------ZmHOX2a(2)        --------->ANAC58              <---------ARR14(2)                                  --------->ARR11(3)        --------->ANAC58       <---------ANAC58--                                  <---------ARR11(3)      ---------->DOF2          <---------ANAC58<- ---------ARR11(3)            ---------->DOF2       --------->ARR14(2)            <---------MYB46(3)- -------->ARR11(3)          <---------HSFB2a(2)     <---------ARR14(2)     <---------ARR14(2)    ----   gaaatctttcaacagtattgttctcaagttcccaaagatcgatgatggtcttcgaaactgcaaagccattttccaagaattcggtgagtgcatatagggc  13371600  Previous    Next  AGI:  At4g26470.1    Description:  calcium ion binding. similar to calcium-binding EF hand family protein [Arabidopsis thaliana] (TAIR:AT3G24110.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO45196.1); contains InterPro domain EF-Hand type; (InterPro:IPR011992); contains InterPro domain Calcium-binding EF-hand; (InterPro:IPR002048) Range:  from: 13371074    to: 13372400    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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