Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                          --------->ZAT14                                                        <---------ZAT14                                                       --------->ALFIN1                                                       <---------REM1(1)                                               --------->ANAC58                                               ----------------->AGL1                                       --------->AHL20(1)                                       <---------AHL20(2)                                       --------->ARR11(3)                                       <---------AHL20(1)--------->ALFIN1                                      --------->ICU4--------->DAG2       --------->ANAC46          ----------->GT1   ---------->DOF2                              <----    --------->ETT(2)       <----------ID1 --------------->AtSPL8                               <-----    --------->ZAT18        <---------TOE2(1)   --------->ANAC58             <---------HSFB2a(2)<----- --------->WRKY38(1)      --------->SPL7  <---------------AtSPL8            --------->HSFB2a(2)<----- --------->WRKY12     <---------------AtSPL8  ------->TEIL    ----------->GT1        --------->ZAT18   gcgttgtccacagaaaatagttttcaagtacgacgaagtaatattttgtacccaaaagtgtagggggaaatatagatactagaagagtgagcaagtagct  13341200    --------->ATHB12   <---------YAB1                            --------->ICU4       ---------->DOF2    --------->GLK1(2) ------DOF2                                  <---------YAB1  --------->DAG2          --------->ARR11(3) ----ANAC46                               <---------TOE2(3) ---------->DOF2    ----------->GT1 ----ANAC58                          <---------AtLEC2     --------->ARR11(3) <---------ANAC46 ----ANAC58                      <----------DOF2         --------->YAB1   ----------->HVH21  <-------GAMYB   tgatggtcattgctaacatgttttagtgagtattcctttgcattgagataattgtgcaaagataaagtgaaagtatatgacctgtaaaatctgtctgtta  13341300                                         <----------DOF2              <------MYB46(1)            <---------DAG2           <---------AtLEC2              <------MYB83            <-----------GT1       <----------DOF2          --------->ATHB12           <-----------GT1        <---------DAG2         --------->ICU4      --------->ANAC58         <---------CCA1(2)               ----------->GT1     --------->ZAT14         --------->ANAC58       <XXXXXXXXXXXXXXXXXXXXMIR399E      --------->HSFB2a(2)     <---------ZAT14       --------->MYB52(1)       <XXXXXXXXXXXXXXXXXXXXMIR399D      <---------HSFB2a(2)   taaacactgcaaagattggtatcgaatagaaacggaattttaactttttaagagtcaaatctctttttgcatcacatttctccttgttctgtaaaatgta  13341400                                         <---------ICU4                                         --------->YAB1                                 <---------HSFB2a(2)                                               --                                 --------->HSFB2a(2)            <---------ANAC58               ------                              <----------DOF2                   <---------ANAC58       --------->ANAC58                        <---------HSFB2a(2)                     <---------ANAC46       --------->ANAC58  <-------MYC3          --------->HSFB2a(2)                  ----------->HVH21       ---------->DOF2  ------->MYC3  <---------AHL20(2)     <-----------ARR10     ----------->TGA1 --------->YAB1  -------   tacacatggaatgtgtgtttaatcttctaaaacttttagaaaatcatcgctctctctctctctatgacgttttagtttgatcaaaatgaaagccaaaaaa  13341500                                                                              --------->At5g28300                                                                              <-------GAMYB                                                                             ----------->GT1                                                                      --------->ZAT18                                                                    --------->ANAC46                                                             <---------At4g35610                                                             --------->At4g35610      ---------------                                                            <xxxxxxxxxxxxxxxsmallRNA(fl3)                                                            <xxxxxxxxxxxxxxxsmallRNA(le3)                                                            <xxxxxxxxxxxxxxxsmallRNA(si3)                                                            <xxxxxxxxxxxxxxxsmallRNA(se3)                                                           <xxxxxxxxxxxxxxxxsmallRNA(i)                                                           <xxxxxxxxxxxxxxxxsmallRNA(fl3)                                                           <xxxxxxxxxxxxxxxxsmallRNA(s)----------->GT1                                                           <xxxxxxxxxxxxxxxxsmallRNA(se3)                                                          <xxxxxxxxxxxxxxxxsmallRNA(s)--------->ANAC46                                                         <xxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                         <xxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                         <xxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <xxxxxxxxxxxxxxxsmallRNA(le3) <--------------                                                        ------>MYB46(1)      <---------MYB46(3)                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                        ----------->RAV1(2) <---------ANAC46                                                        <xxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                        ------>MYB83--------->ANAC58  ---------------                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                       <xxxxxxxxxxxxxxxxxxxxsmallRNA(s2)                                                       --------->MYB52(1)  *TSS     <-----------GT1                                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)                                                      <xxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                                                      ------->GAMYB --------->ANAC58--------->MYB52(1)                     <-----------HVH21                <xxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                    <xxxxxxxxxxxxxxxsmallRNA(se3)     <xxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                   --------->TOE2(2)                  <xxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                   --------->TOE1(2)                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)                  ----------->RAV1(2)                --------->MYB46(3)    <---------ZAT14        <xxxxxxxxxxxxxxxxsmallRNA(s)                 <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)       <xxxxxxxxxxxxxxxxsmallRNA(s)                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(i2)      <xxxxxxxxxxxxxxxxsmallRNA(s)                  <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)    <xxxxxxxxxxxxxxxxsmallRNA(s)                    <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(s2)--------->At5g28300    <---------ARR14(2)----------->HVH21             <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3) <-----------------AGL1                           <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)         <-- ----------------->AGL1                   --------->ANAC46<xxxxxxxxxxxxxxxxxsmallRNA(fl3)         <-- <---------ANAC46------->TEIL             --------->ANAC58<xxxxxxxxxxxxxxxxxsmallRNA(se3)      <----- ------->ZAT18------>ZmHOX2a(2)       <xxxxxxxxxxxxxxxxxxxxsmallRNA(fl3)   --------->ZAT14    ------- --->DAG2  <xxxxxxxxxxxxxxxxsmallRNA(se3) --------->ANAC58<xxxxxxxxxxxxxxxxxsmallRNA(si3)   --------- --->DOF2<xxxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(fl3) <xxxxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3) <-------TEIL   gtggcctatacagggatcgaacctgtgaccttcgcgttattagcacgacgctctaaccaactgagctaataggccactgcggttataaacggtacattaa  13341600           <---------GLK1(1)           <------------CBF                                                              --------->AHL20(1)      <---------LBD16                                                                    <---------AHL20(2) >AtSPL3   --------->GLK1(1)                                                             <---------AHL20(1) -AtSPL8  <---------ARR14(2)                                                             --------->AHL20(2) >AtSPL8--------->LBD16    --------->GLK1(2)                                         <---------YAB1 -------ICU4            <---------YAB1                                             --------->YAB1 -------AHL20(2)    <------------CBF                                             ----------->GT1 ----AHL20(2)       <---------GLK1(2)                --------->ANAC58            --------->ANAC58 -->AHL20(2)   <---------ANAC46            <----------DOF2--------->ICU4         --------->ANAC58 >TOE2(3) --------->ARR14(2)    ----------->HVH21    --------->ANAC58     <------------CBF<---------AHL20(2)   atatttctcgcggaattgcctagattgtgattctgtgacagttttctttcaagacaagtaagtatcaagtgctacaaattggcaagtataatttattcaa  13341700                                   <---------AHL20(2)               <XXXXXXXXXXXXXXXXXXXXMIR781                                              --------->TOE2(3)              <---------ZAT6     <---------RVE1(1)                     <----------DOF2--------->ARR11(3)        --------->ARR11(3)      <---------GLK1(2)        --------->AHL20(2)           <---------ARR11(3) ----------->GT1                --------->ARR11(3)       <---------AHL20(2)           --------->GLK1(2)   gagttgaaaatatcaagtgttcagaaaattttcagattttttttttgggtttattcgatttatattttgttttctttttattctacaaaatcttagaaaa  13341800                                            <--------ATHB1                                            -------->HAHB4                                          -                                            --------->ATHB51                                  -------                                            <---------ICU4                              --------->TOE2(3)                                           <---------AHL20(2)                           --------->YAB1                                           <---------YAB1                             --------->ARR11(3)                                     ----------->GT1                                  <---------ARR11(3)                                --------->YAB1                                     <---------AHL20(2)                             --------->YAB1--------->AHL20(2)                      --------->AHL20(2)                       --------->LBD16     --------->ICU4                  <-----------GT1   --------                      <---------HSFB2a(2)  <---------ATHB51            <---------AHL20(2)    <-------            <-----------GT1 --------->AHL20(2)                         --------->AHL20(2)    <-------    <---------WOX13(1)--------->HSFB2a(2)--------->YAB1        ---------->DOF2 ------>ZmHOX2a(1)  <--   tactagattgatattttccttcttccacaaataataaaaacgaaaataattgttgttcatagtataaaagtatttattttcctaataaaatcttaatgat  13341900                                                                                  ------------>CBF                                                                                 --------->ZAT6                                          <------------CBF                  <---------ANAC55(2)                                         --------->ATHB51                   --------->ANAC55(2)                                         --------->ATHB12                 <-----------GT1                                         <---------ICU4               --------->AHL20(1)                                        <---------YAB1                --------->AHL20(2)                                      --------->YAB1              --------->AHL20(1) -------->ZAT6                       <---------YAB1               <---------AHL20(2) -->ATHB12              <---------ANAC55(1)  <---------MYB46(3)   --------->AHL20(2) ->ICU4    <---------YAB1           <-----------GT1      ------->GAMYB<---------AHL20(1) --ATHB12--------->AHL20(2)     --------->AHL20(2)     <---------At4g35610--------->AHL20(2) --YAB1  <---------AHL20(2)     <---------AHL20(2) --------->TOE2(3)  <---------AHL20(2) ---------GT1           <---------ANAC46--------->ICU4 --------->At4g35610<---------AHL20(2)   ttactctacatttatttttgtatgttaagtgtatttattttcattattggttatctcaactcacagaattaattaattacttaacacaattcttcatttt  13342000                                                               ---------->DOF2                                                               --------->MYB52(1)                                                            -------->P                                                            ------>MYB46(1)                                                           --------->MYB55(1)                                                          <---------MYB55(2)                                                          --------->AtMYB61                                                          --------->DEAR3(1)                                                          <---------MYB46(2)                                                          <---------MYB111(2)                                                          --------->MYB46(3)                                                          <---------MYB111(1)                                                         --------->MYB46(3)                                                       --------->AtMYB61                                                       <---------ALFIN1                                                    <---------ALFIN1                                                    --------->DEAR3(1)                                <---------TOE2(3)   --------->AtMYB61                            <----------DOF2        --------->MYB46(3)                        --------->TOE2(2)        <---------ALFIN1                        --------->TOE1(2)        --------->AtMYB61                   <---------At4g35610        --------->ANAC46--------->AtMYB61                   --------->At4g35610    ----------->RAV1(2) ------->GAMYB            =======================RAV    --------->At4g35610<---------MYB55(2)            <-----------RAV1(1) --------->MYB59 --------->MYB46(3)       --------->AHL20(2)  <---------ANAC46  --------->ZAT18------>MYB83     --------->ANAC58  ----------->RAV1(2)<---------At4g35610--------->MYB46(3)  --------->ANAC46     --------->ANAC58  <---------ZAT2    ------->TEIL --------->MYB46(3)    <---------ARR14(2)     --------->ANAC46 -------->P<---------TOE1(3)--------->DEAR3(1)         --------->ARR14(2)   agtccccaagtaatttgttgcagcaacctgcgtttaggttttgcatctgcaccaccaccaccaaccaaaggccttgcatttccacatcaaacgttacgaa  13342100  Previous    Next  AGI:  At4g26380.1    Description:  DC1 domain-containing protein. similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G02540.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G48320.1); similar to DC1 domain-containing protein [Arabidopsis thaliana] (TAIR:AT5G03360.1); similar to DC1 domain-containing protein [Brassica oleracea] (GB:ABD65623.1); contains InterPro domain Protein kinase C, phorbol ester/diacylglycerol binding; (InterPro:IPR002219); contains InterPro domain C1-like (InterPro:IPR011424); contains InterPro domain Zinc finger, PHD-type; (InterPro:IPR001965); contains InterPro domain DC1 (InterPro:IPR004146); contains I Range:  from: 13338087    to: 13341569    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g26385.1    Description:  pre-tRNA. tRNA-Ile (anticodon: AAT) Range:  from: 13341502    to: 13341575    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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