Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                     <-------TEIL                                                                  <------ZmHOX2a(2)                                                                 <---------ARR14(2)                                                                 --------->ARR14(2)                                      ------->GAMYB              --------->AGP1                    --                                     --------->MYB46(3)         --------->At4g35610                <-                                     <---------ALFIN1           <---------At4g35610                <-        --------->DEAR3(1)          -------->P           <---------ANAC58                         ---       <---------LBD16          --------->ANAC58         <---------ANAC58                         <--   <-----------HVH21            --------->ANAC58        <-------TEIL                   <----------DOF2  <----------DOF2             ---------->DOF2         --------->TOE2(2)          ---------->DOF2----- -------DOF2              ---------->DOF2             --------->TOE1(2)     --------->MYB52(1) <-----   ttcactttcaccggctactacccttgaagaaagaaagcaaccccctcataaacaaacatgcgtttcagatccattgaataccgaaaagcctttttatatc  13283200        <---------ANAC46     <---------RAP2.6(2)              --------->ANAC58   --------->MYB52(1)       ----------->HVH21 ------->ATHB51           --------->ZAT14 -------HAHB4             <---------At4g35610 --------ICU4             --------->At4g35610 <---------AHL20(2) ------>ICU4              <---------ZAT2   ----------->GT1                    ---------->DOF2 -------YAB1              --------->ZAT2 ---------->DOF2                  --------->ANAC46         <- ---->YAB1    <-----------GT1         --------->ANAC58               <---------AHL20(2)    --------->ALFIN1 ----YAB1 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)             <---------LBD16 --------->ANAC46       --   ataattagcggcttattatctatctcactgctgacattagaagcaaagttaatttctgtttctctggataatttatacacaaaagttttgaaggtgaggc  13283300                              <---------ZAT18                              <---------ETT(2)   <------MYB83 ---------->ID1                     <---------ICU4              <------MYB46(1)                               <-----                     --------->AHL20(2)       <---------MYB52(1)    <---------YAB1          <-------- --------ICU4        --------->YAB1  <-----------RAV1(1)  <----------DOF2                   <-------- ------->YAB1     --------->YAB1    <---------TOE2(3)  <-----------GT1            <-----------GT1   atcatcactcgtgctagctctaataatatcagtcgactaatgttggccatttggttttttctttgtcattttcatttatgtgaataaccatttttcttgg  13283400                                                           --------->TOE2(3)                                                           <---------DAG2                                                           --------->AtMYB61                                                           --------->TOE1(3)              --------->YAB1                                                         -------->P                      <---------YAB1                              <---------YAB1             ------>MYB46(1)                 <---------AHL20(2)                   <------MYB83                          ------>MYB83                 --------->AHL20(2)                   ----------->GT1                     <---------MYB111(1)            <---------AHL20(2)                   <------MYB46(1)                     <---------MYB111(2)            --------->AHL20(1)                  --------->MYB59                      <---------MYB46(2)             <---------AHL20(1)                  --------->MYB46(2)                   <---------MYB59           <------NtERF2<------                  <---------MYB46(3)           <---------At4g35610             --------->ANAC58 ----TOE1(2)     <---------MYB55(1)            --------->At4g35610             --------->ANAC58 -ANAC58        <---------MYB52(1)         --------->TOE2(3)                   --------->ANAC46     < -ANAC58   <-----------GT1   ------->TEIL  --------->TOE1(3)  -------->P      --------->RAP2.6(3)  <-   gtttagagtctataaaccgtttggtaagatgtatcattcgtgaaacctcagcacataccaaccttaccagagaagagtaagacggcattatattataaac  13283500             <---------YAB1            ------->TEIL         <---------ANAC55(2)  ----------->GT1                                                                    <-------TEIL  <------MYB46(1)                                                                    *TSS  <------MYB83                                       <---------AHL20(2)           <------MYB46(1) --------->MYB59<---------YAB1               <---------ARR11(3)                   <------MYB83 <---------MYB46(3)                          --------->ARR14(2)          --------->TOE1(2) --------->MYB46(2)                          <---------ARR14(2)          <---------ARR14(2) -----GT1--------->ANAC55(2)            ----------->GT1    ------------>CBF <---------YAB1 ---------MYB55(1)          --------->YAB1   --------->GLK1(2)<------------CBF   --------->MYB59 --------MYB52(1)   <<<<<<<<<TBF1 ---------->DOF2------>ZmHOX2a(1)       --------->ARR14(2)       <--   cgtttggtaatatgtatcattcttcttctatcacaaaaaaggaagaaaatcctatatttttgacaattgtctgaaaatacgattaggttcagagtatttc  13283600                                                     --------->ALFIN1                                                     <---------REM1(1)                                                   <------MYB83                                          --------->ANAC58               <---------GLK1(2)                                          --------->ANAC58       <---------ALFIN1                                      --------->ANAC58         <-----------HVH21                                      --------->ANAC58     --------->ANAC58             ------>ZmHOX2a(2)                                      --------->ANAC46     --------->ANAC58      <---------MYB46(3)         <-----------HVH21    <---------ANAC46   <--------P--------->ANAC46 <---------ZAT14 -------TOE2(3)       --------->YAB1---------->DOF2<------MYB46(1) --------->ANAC46  --------->ATHB12   aacgttgtctctgtcatttgtctatcgcaatttcgcataaaagcaagccttgtaggtgtagaagccatcacaccagattgtagtggatgatcggaaacta  13283700                                                                                           <---------MYB52(1)                                                                                          <-------GAMYB                                                                                          --------->TOE2(3)         <---------At4g35610                                                             ------>ZmHOX2a(2)         --------->At4g35610     ----------->HVH21                             <---------ICU4         ----------->RAV1(2)     --------->ETT(2)                             <---------YAB1  <---------ZAT14     ------>ZmHOX2a(1)    ------>ZmHOX2a(1)     <-----------GT1         <---------MYB46(3)  --------->ZAT14 <-----------GT1<---------ETT(2)           <----------DOF2   --------->ICU4 --------   agacttcagtcatctggtattctcctctctctctctcgaccggtcctcactataagtcttctctttgtaacatttttgtgatcattttggatcgttagtt  13283800                                                            --------->At4g35610                                                            <---------At4g35610                                                          <---------WRKY12                                                          <---------WRKY38(1)         <----------DOF2    <---------YAB1         --------->YAB1        <---------ATHB12 ->MYB52(2)        <---------YAB1  <---------ZAT18<-------TEIL         --------->WOX13(1)      ------   ttgtagttgttctttttttttatgagtgttttgatagtgaacataaacttgattcataagtcaactgtatgctcaatcaattggtttttgaagaagttag  13283900                                                 <----------DOF2                                                <---------DAG2                                             --------->ANAC58                                             --------->ANAC46                                             --------->ANAC58                                          <---------REM1(2)         --------->ANAC58             <-----------ARR10         --------->ANAC58             --------->ARR11(3)         --------->ANAC46          --------->AHL20(2)        --------->WOX13(1)      --------->At4g35610                     <---------ZAT6   <---------ANAC58     --------->GLK1(2)   --------->AHL20(2)<---------ALFIN1             ----------->GT1  <---------ANAC58 --->MYB52(2)         ----------->GT1 <---------ARR11(3)     ---------->DOF2 ---------->DOF2   ttctaagaatcaagcaattggataagataaaatcagataaaatctacacgccttttatcaaggcaaagcttatagtgtttaaagctgttttccttgaaaa  13284000                <---------HSFB2a(2)             <----------DOF2          <---------ALFIN1       ------>ZmHOX2a(2)      <------ZmHOX2a(2)                  -------->P      --------->CCA1(2)                  --------->ANAC58                                       -----     --------->AGP1                      --------->ANAC58                                   ---------     <---------ARR14(2)                --------->MYB46(3)                              --------->ANAC46     <---------ARR11(3)       <---------ZAT14         ---------->DOF2                  --------->ANAC58     --------->ARR14(2)    ----------->GT1     --------->YAB1                          --------->ANAC58     <-----------ARR10---------->DOF2 --------->At4g35610                          <---------YAB1     --------->ARR11(3)--------->DAG2 <---------At4g35610                       <---------MYB52(1) ---------->DOF2--------->HSFB2a(2)--------->ZAT14   <---------ATHB12           --------->ARR14(2)   cttgaaagatctacactttcagaaaaaagttgtaaactgcagcaacccataatcaataaagaaccagtagtagttttcttcagttatgcaagcaaagatt  13284100  Previous    Next  AGI:  At4g26210.1    Description:  mitochondrial ATP synthase g subunit family protein. similar to mitochondrial ATP synthase g subunit family protein [Arabidopsis thaliana] (TAIR:AT4G29480.1); similar to unknown [Solanum tuberosum] (GB:ABA40451.1); contains InterPro domain ATPase, F0 complex, subunit G, mitochondrial; (InterPro:IPR006808) Range:  from: 13281946    to: 13283411    Orientation: Forward Links:  TAIR  MIPS    AGI:  At4g26220.1    Description:  caffeoyl-CoA 3-O-methyltransferase, putative. Identical to Probable caffeoyl-CoA O-methyltransferase At4g26220 [Arabidopsis Thaliana] (GB:Q9C5D7;GB:Q8LBF3;GB:Q9STR2); similar to caffeoyl-CoA 3-O-methyltransferase, putative [Arabidopsis thaliana] (TAIR:AT4G34050.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN83622.1); contains InterPro domain O-methyltransferase, family 3; (InterPro:IPR002935) Range:  from: 13283585    to: 13285332    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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