Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100        --------->ATHB12      --------->ATHB51     <---------YAB1                                                                           -------  --------->AHL20(2)                                ------->GAMYB                             <------  <---------AHL20(2)                             ----------->RAV1(1)                         <-------  <---------YAB1                            --------->LBD16                                  -------- -----ANAC55(2)                            <---------ANAC58  <---------WRKY12            --------->LBD16 ---->ANAC58                               <---------ANAC55(1)   --------->YAB1         --------->LBD16 ---->ANAC58                               <---------ANAC58  <---------WRKY38(1)   --------->At4g35610 -->CCA1(2)             --------->At4g35610<---------ANAC46 --------->WRKY18(1)    <---------At4g35610 --ARR14(2)             ------>ZmHOX2a(1)  --------->ANAC55(2)--------->WOX13(1)   --------->ZAT2 ->ARR14(2) --------->bZIP60(1)       <---------At4g35610 --------->WOX13(1)     --------->MYB46(3)<-   gcatattattattgatgccactgctcctctgcatatttagagcttccgtgccaacagcatcagtcaatgagaaactcgattcaacagctcccgagaccac  13035800                   --------->O2                   --------->ANAC46                   =============================bZIP_DOF                   <---------TGA1a                   <---------O2            --------->ORA47(1)                --------->MYB46(3)        --------->DEAR3(1)                <---------MYB55(2)        --------->RAP2.6(2)                --------->DEAR3(1)   ---------->DOF2               --------->ANAC58     <------ZmHOX2a(2)               --------->ANAC58     ===========================HOX2a_HOX2a -->AtMYB61   ------>NtERF2--------->At4g35610 ---ALFIN1   <---------ALFIN1      --------->ARR11(3)             --------->At4g35610               < --ABI4(2)--------->PCF2<---------At4g35610<---------RAP2.6(3)    <---------At4g35610  --------->TOE1(3) ->MYB46(3) --------->MYB46(3)--------->MYB52(1)                  <---------LBD16      --------->TOE2(3) --------MYB52(1)  --------->TGA1a --------->AGP1       <------ZmHOX2a(1)  ---------->DOF2 <---------   cgttctgttcatgccccacccacgagagcagataacagatcaagccgtccaaatacaaggactgattcagcggaatgaaaagcttgaaactttaaaccct  13035900                                                                                              ------>ZmHOX2a(2)                                                                                             <------ZmHOX2a(2)                                            --------->At4g35610                             <--------                                            --------->ZAT2                                  <--------       --------->ARR14(2)                <---------At4g35610                            --------->YAB1       --------->GLK1(2)                --------->ANAC46                      <-------GAMYB<------ZmHOX2a(1)       <---------ARR14(2)           ------>ZmHOX2a(2)                        ----------->GT1---------       <-----------ARR10          <---------ARR14(2)              --------->YAB1     --------->WOX13(1)   --------->YAB1                 --------->ARR14(2)             <---------ATHB12   <---------ICU4   --------->HSFB2a(2)---------->DOF2 ------>ZmHOX2a(1)         ------>MYB83 <---------MYB46(3) ----------DOF2  <---------MYB52(2)<------ZmHOX2a(2)            ------>MYB46(1)    <---------ATHB12 --GT1<---------GLK1(2)      --------->MYB52(1)                --------->WOX13(1)  <---------YAB1  <-   tcctttcagaatctgagcaaataacaaagccaaacggatcctaagcagctatggtatactttcaccaatcaaactaagatggttaatcattcaggatcca  13036000                                                        --------->YAB1                                                        <---------ICU4         ---------->DOF2                                                       --------->ICU4        --------->At4g35610                                                 <------MYB46(1)           --------->YAB1                                             <------MYB83               <---------ICU4        --------->AHL20(2)               --------->ATHB12               --------->YAB1 -ARR14(2)                          <---------ATHB12   <---------ATHB12--------->ICU4 -ARR11(3)                    >>>>>>>>>MYB2  <------MYB46(1)        --------->ICU4 >ARR14(2)    <---------At4g35610 ------>MYB83 <--------P  --------->YAB1 <---------YAB1            - --------ICU4 --------->At4g35610 ------>MYB46(1)<------MYB83--------->At4g35610             <-------   agaattacaaatatttagctgaaggaaatgaaaaccaaatcaaagattggtaggctaataatcagaagccctaattatcagaagagcaaattcaacatct  13036100                    ---------->DOF2                  ------>MYB83    <------ZmHOX2a(1)                                               <---------GLK1(2) --------->DAG2   ------>MYB46(1)                         --------->YAB1                        ----- --------->DOF2  ----------->RAV1(1)                     <---------ATHB12               --------->At4g35610 --ARR11(3)   -------->P                        <---------ZAT18   --------->LBD16       <-------GAMYB   caaaaaggatagaacttaccaacaaagactaaaacttcaaatccaatcggcgaactcaaatcaaaacccagaaactgaaatcgacttgggagttgcacaa  13036200                                                                                       --------->YAB1                                                         ----------->RAV1(1)          <---------ATHB12                                                       <---------At4g35610            ----------->GT1                                                 <----------DOF2                  ------------>CBF                                              <-----------GT1                  --------->RAP2.6(3)                                           --------->AHL20(2)                 --------->ARR14(2)              >>>>>>>>>SARD1               <---------AHL20(2)                 <---------ARR14(2)    <        --------->YAB1                    --------->AHL20(2)  <-------TEIL    --------->MYB52(1)    -    ---------->DOF2   *TSS           ----------->GT1   --------->At4g35610   --------->RVE1(1)     <- ---->GLK1(1) >>>>>>>>>CBP60g       ----------->GT1 ---------->DOF2      --------->AHL20(2)   -------   atcccaaaaatcagaaatttggaagaaactcagtagagagggaaattaatactttacagcagcattcatggaagaaaaaatatcggcaatgaaaaaaaaa  13036300                             --------->ANAC58               <---------ZAT18               <---------ZAT14      <---------YAB1         --------->ANAC46   <---------AHL20(2)        --------->ANAC58   --------->AHL20(2)      <-----------GT1               --------->ANAC46 ---------ARR11(3)     --------->AHL20(2)                --------->ANAC58 <---------ZAT14 -------->ARR11(3)     <---------AHL20(1)   --------->GLK1(2)       --------->DAG2 --------RVE1(1)       --------->AHL20(1)   <---------ARR11(3)     ---------->DOF2       --------->YAB1 --->DOF2      --------->ZAT18     --------->YAB1        --------->ANAC58 <---------ARR14(2)  -------   gagattttatttttgagttcacaaatattttacgcaaacataacaaaatctaatttctcaagccaaaaaaaaagggtatacagtagtacaatagtcaaaa  13036400                        --------->TOE2(3)                        --------->TOE1(3)                       ----------->RAV1(2)                                                 ----------       --------->At5g28300                                                       --------->ARR11(3)      ----------->GT1 -------->P                                      --------->YAB1      <---------ANAC46 --->DOF2      --------->YAB1            --------->GLK1(2)         --------->WOX13(1)     <---------HSFB2a(2)   gctagggacagtaacaaaaatactaacctgaaattgataagagaattttggaaaaatggaagaaaaaaacaatcacaaattaagacctagttgtggaaaa  13036500                                         >>>>>>>>>>WRKY40                                  <---------WRKY38(1)                                         >>>>>>>>>>WRKY62                          --------->ZAT14                                         <---------WRKY18(1)                       <---------SPL7                                        --------->WRKY45                           <---------ZAT14                                        --------->WRKY38(1)                     ------>MYB83                       <---------AHL20(2)>>>>>>>>>>WRKY18                       ------>MYB46(1)                      --------->AHL20(2)--------->WRKY12                      ------->GAMYB<---------WRKY12                <-----------GT1    <---------ARR11(3)                        --------->DEAR3(2)           --------->AHL20(2)      <---------ARR11(1)                      --------->MYB52(1)           <---------AHL20(2)      --------->ARR14(2)                 <---------MYB52(1) <-----------HVH21          <---------WOX13(1)       <---------ARR14(2)       ----------->GT1<-----------GT1--------->WRKY18(1) ->GT1  --------->ATHB12          <---------CCA1(2)   <-------TEIL   ----------->GT1 ------->TEIL   aaaaaactcttgatttattaactataaaatagctccaaatctttgaccaaaaaacatacatatagtataaccggtaataaccgactgtaccggtcaacta  13036600                                         --------->ALFIN1                                        <-------PIF5                                        ------->PIF5                                        ------->MYC4                                        <-------MYC3                                        <-------MYC4                                        <-------MYC2                                        ------->MYC2                                        ------->PIF4                                        ------->MYC3                                       --------->O2                                       <---------ANAC55(2)                                       <---------TGA1a                                       --------->TGA1a                                       --------->ANAC55(2)                                       <---------O2                                      ------------>OsbHLH66                            <---------ANAC55(2)                                     <---------ALFIN1                                  <---------ANAC58                 <---------ANAC46    <------------OsbHLH66                             <---------ANAC46             ------>MYB83          <-----------HVH21                                   --------->ANAC55(2)             ------>MYB46(1)      ----------->HVH21                                    <---------ANAC58            --------->ORA47(1)    --------->DEAR3(1)                                   --------->TGA1a           --------->DREB2C(2)    --------->At1g77200         --------->ANAC55(2)      <---------TGA1a           --------->MYB46(3)     --------->DREB2C(2)       ------>ZmHOX2a(2)          <---------ANAC55(1)           <---------MYB46(2)     --------->DEAR4(1)       <------ZmHOX2a(2)           <---------bZIP60(2)           ----------->HVH21      <---------ETT(1)        <---------ARR11(3)           <---------O2           --------->DEAR4(1)    --------->DEAR3(2)       --------->ARR14(2)<---------PCF5           --------->DEAR3(1)   ------>NtERF2             --------->ARR11(3)<---------PCF2          --------->DEAR3(2)--------->ANAC46              <---------AGP1 --------->ALFIN1    ------>NtERF2      <-----------TGA1      --------->ANAC58              <---------ARR14(2)--------->TCP15(1)<------NtERF2      <-----------HVH21     --------->ANAC58 <---------TGA2(2)<---------ANAC55(2)      --------->O2     --------->ANAC46  <------ZmHOX2a(2)<-------PIF4     <---------CCA1(2)  --------->TCP20  --------   gctctaagcgtcaccgacctcgtggatcaaacgacaccgacacgtgctgatgtcttagtagatctcgtaatagaagtgggaccatagttacgtggcacca  13036700  Previous    Next  AGI:  At4g25520.1    Description:  SLK1 (SEUSS-LIKE 1); transcription regulator. similar to SLK3 (SEUSS-LIKE 3), transcription regulator [Arabidopsis thaliana] (TAIR:AT4G25515.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO70396.1) Range:  from: 13032187    to: 13036222    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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