Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                             ------>MYB83                                                                                           ------>MYB46(1)                                                                                          --------->MYB52(1)                                                                                          -----------                                                                                     --------->At4g35610                                                                                    ------->GAMYB    <------MYB83                                                                   --------->MYB46(3)    <------MYB46(1)                                                               ---------->DOF2   --------->MYB59                                     <---------YAB1            ----------->RAV1(1)   <---------AtMYB61                                  --------->ARR11(3)  <---------HSFB2a(1) ------->ATHB12                                       <---------ARR11(3)  --------->HSFB2a(1)------->GAMYB -------->ARR10                           --------->SPL7     ---------->DOF2     --------->MYB52(1) ------>ICU4                        <-----------GT1 ------->TEIL         --------->DAG2  --------->AtMYB61 -------YAB1                  <---------ARR14(2) <---------YAB1        ---------->DOF2   --------->MYB46(3)   atgatttggtcgaacagttcgagttggatgcaaatttgttaccataccaccatgaatatcatacaaagaaccaaaaaggttcccaacagcaccaacagaa  11255000                                                                             <---------ANAC58                                                                             <------MYB46(1)                                                                             <------MYB83                    <------ZmHOX2a(2)                                <-----------------AGL1                    --------->CCA1(2)                              <-----------GT1                ---                   --------->ARR14(2)                          <---------WOX13(1)                 ---                   <---------ARR14(2)                         <---------ANAC58                    ---                   <---------ARR11(3)                         <---------ANAC58        ------->GAMYB -                   --------->AGP1                            --------->ATHB12<---------ANAC58    ----                   --------->ARR11(3)                       <-------TEIL    --------->MYB55(2)------>MYB83               ---------->DOF2                             <--------P----------------->AGL1--------->MYB46(3)      ---------->DOF2                                    ----------->GT1    <---------MYB46(3)------>MYB46(1)     <---------REM1(1)                                  --------->DAG2    <---------MYB52(1)--------- >RAV1(1)  ----------->RAV1(1)   ------->TEIL  --------->TOE2(3)<---------MYB46(3) ----------->RAV1(1)   gatgaagatgaagcaccaaaagatccaacaagatgaacgttttcttgaacattagagaaaggttgattgttacctcgttgggtctcaacagaaaccatcc  11255100                                                                                             --------           <-------TEIL                                                                     ---------    ------->GAMYB                                                                           ---------   --------->MYB46(3)                                                                  <-----------ARR10  -------->P                                                                           <---------ARR11(3) ------>ANAC46                                                                    <---------ZAT14   < ------>ANAC58   <---------At5g28300                                              --------->ZAT14   < ------>ANAC58  <-----------GT1              <-----------------AGL1      ------>NtERF2 <---------ARR14(2) -------->MYB46(3)                 --------->ANAC58                     <---------ALFIN1 --------->TOE1(2) ----->LBD16  <---------WOX13(1)   --------->ANAC58                  --------->PCF2    --------->ARR14(2) >AtMYB61 <--------P        <---------MYB52(1)                   ---------->DOF2  --------->ZAT18 ---   gagcaaccgaaggttgatttacccttgcccgtttggcacgactacttccaccaattggtatgtttcttaaagccccaccatgagtccagtatctacgaca  11255200                                                                                                    <                                                                                                   --                                                                                                   <-                                                                                                 <---                                                                                              <------                                                                                             <-------             <---------ANAC46                                                                <-------             <---------ANAC58                                                             --------->ALFIN1    <---------HSFB2a(2)                        <---------------AGL15                      <---------AtMYB61    --------->HSFB2a(2)                        --------------->AGL15             <---------ALFIN1---- --->RAV1(1) <---------ANAC58               <-----------GT1                    --------->ANAC58 <---- >ANAC46 --------->HSFC1(2)              --------->YAB1                        --------->ANAC58 ----- -->HVH21<---------HSFC1(2)           ----------->GT1         --------->YAB1   <---------ALFIN1 <---- ---------ANAC58                <---------MYB46(3)           <---------YAB1   <---------ZAT18-------- ---------ANAC58            --------->ZAT6  --------->YAB1<---------YAB1   --------->AtLEC2<---------MYB46(3) ------>ARR11(3)  <---------ANAC46 <---------MYB46(3)   <---------ZAT6<---------ALFIN1    <---------DEAR3(1)   gttcttgcagaagtatcgtggctgaaactcacagtagttgttgtaataacaaaatttagtattatcagaatcacaccttgcacacactcgaggtggtggt  11255300   ------>NtERF2  <---------RAP2.3(3)  <---------PCF2 --------->ATERF1(1) <------NtERF2 ---------MYB46(3) ------->ALFIN1 --------ANAC46 ------MYB46(3) ---MYB46(3) --AtMYB61 --DEAR3(1)             <---------WOX13(1) ----->MYB55(2)        <---------ANAC58 -----AtMYB61          <---------ANAC58 ---->ALFIN1          --------->ATHB12 -----DEAR3(1)     --------->ANAC55(2)                               --------->DAG2            ------ ->ALFIN1 --------->ANAC46     --------->ATHB12                     ---------->DOF2         <--------   ggtgggggcttcacatcattcacttgattgtcttcatttgcgaaaacattcaagttatccatttctctcaaaaagtttttgattttctcttattaagaaa  11255400                      <---------ANAC46                    <---------ANAC46               ------>ZmHOX2a(2)              <------ZmHOX2a(2)             <---------ARR14(2)             <---------ARR11(3)             --------->AGP1                                  <---------ARR11(3)             <---------AGP1                                  --------->ARR11(3)             --------->ARR14(2)                         <---------ZAT6                             --             <---------ARR14(3)                       <---------ANAC46                             -- ---->DOF2   --------->ARR11(3)           <---------TOE2(3)  --------->GLK1(2)            ---------->DOF2 -TOE2(3)    --------->ARR14(3)      <-----------TBP  ----------->GT1                   <---------TOE2(3)   agacttgagttataagatcttgttgtggagagtgtcttcttatataggtttttgtttagtgaaaatctaagaagagtatgttttgggtttaagaaagtga  11255500                       ----------->GT1          --------->ANAC46            <-------MYC3                     ----------->RAV1(1)            ------->MYC3                    --------->ANAC58           <---------ANAC58                 --------->ANAC58           <---------ANAC55(2)            <---------ALFIN1                                  ---------           <---------ANAC58 <------------CBF--------->ANAC46                              <---------YAB1  <---------YAB1     <------------CBF<-----------ARR10                                 <---------AHL20(2) ------->ICU4 <-----------HVH21      --------->ARR14(2)                         <---------TOE2(3) ------->GLK1(2)     <---------GLK1(2)   <---------REM1(2)                     ---------->DOF2   gattatgagcaaaacgtgtcaaagattgtttattgatcaaatctacacaccagaaacctttggctaagtttagtcaaaaactaaagttttttattcttaa  11255600                                           --------->AHL20(2)                                       <---------AHL20(2)                                   ---------                                      --------->AHL20(2)                                    -------->HAHB4                                      <---------AHL20(1)                         --------->YAB1   ---                                      <---------AHL20(2)                        <---------YAB1 <-----                                  --------->AHL20(2)                        --------->AHL20(1) ------                                  <---------AHL20(2)                        --------->ARR11(3)<------               --------->AHL20(2) <---------YAB1                            <---------ARR11(3)-------               <---------AHL20(2)--------->AHL20(2)                     ---------->DOF2    <---------YAB1            --------->YAB1       <---------AHL20(1)                 <---------ARR11(3)     ----------   <---------ANAC58              --------->AHL20(1)                 --------->ARR11(3)     --------->ICU4   <---------ANAC58 ----------->GT1   --------->AHL20(1)         --------->AHL20(2)    <---------ZAT14 >TOE2(3)  ----------->TBP --------->YAB1<---------TOE2(3)       <---------AHL20(2)   <---------ZAT6   ctcttgtttgtctataaaaaaatggtgaatcaaaatataatttaatgaattagtcatataaacaaaataaaatctaaagatattgatagtgtaatgataa  11255700                                                                                     <---------ANAC58                                                                                   <---------ANAC46xx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                   xxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                                 xxxxxxxxxxxxxxxxxxxx                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                           xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                           xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                         xxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                         xxxxxxxxxxxxxxxx>smallRNA(i)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                                         xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                      xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                      xxxxxxxxxxxxxxxxxxxxxx>smallRNA(l2)                                                                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                                   xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)                                                                  <xxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)                                                                 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)                                                               <xxxxxxxxxxxxxxxxxxxxsmallRNA(si3) ---                                                             --------->ZAT18   <xxxxxxxxxxxxxxxxxxxxx                                                             --------->ZAT14   xxxxxxxxxxxxxxxxxxxxxx                                                          <---------ANAC46 xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                          <---------ANAC58xxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)                                                          <---------ANAC58xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)                                                        <---------ANAC58 <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)                                                        <---------O2<---------ALFIN1 <---------ANAC58                                                        <---------ANAC46xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                        <---------ANAC58xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                        <---------bZIP60(2)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)                                                     ----------->HVH21--------->ANAC58            <--                                                   --------->ANAC55(2)--------->ANAC58      <--------                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3) <---------ANAC46                                               xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)<-------TEIL <---     --------->YAB1                          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xxxxxxxxxxxxxxxxxx >YAB1                                      <------MYB46(1)  <---------ZAT18   xxxxxxxxxxxxxxxxxxxxxx ------>AHL20(2)                            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)xxxxxxxxxxxxxxxxxxxx ----ICU4                                   <------MYB83<---------TGA1axxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3) --->ATHB12                                xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)xxxxxxxxxxxxxxxxxxxxx ---YAB1                                 --------->ARR14(2)  <---------ZAT14 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3) -->ICU4                                 <---------ARR14(2)  --------->REM1(2) xxxxxxxxxxxxxxxxxxxxxx ->GT1                   <-------TEIL xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)   ttgaatatcaaaatagcataaattgcatacatttactataacagataggttttatgtgacgcgtgtactcacactctatttcatggtgcgttttataaat  11255800              <---------ANAC58              <---------ANAC58              <---------ANAC46            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          --------->CCA1(2)          xxxxxxxxxxxxxxxxxxxxx>smallRNA(i2)          --------->ARR14(1)          xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(le3)         --------->ARR11(3)         <---------GLK1(2)         <---------ARR11(3)         --------->ARR14(2)   --------->YAB1  <---------YAB1 xxxxxxxxxxxxxxxxxxxx>smallRNA(si3) xx>smallRNA(le3) xxxx>smallRNA(le3) xx>smallRNA(si3) xx>smallRNA(se3)                                                                                <--- ------>ANAC55(2)                                                                               ----- xxsmallRNA(i2)                                                                               <------ZmHOX2a(1) x>smallRNA(le3)                                                                         --------->CCA1(2) -------ANAC55(2)                        <------MYB46(1)                                <---------AHL20(1) -YAB1 xxxxxxxxxxxxxxxx>smallRNA(si3)    <------MYB83                                   <---------AHL20(2) ----TEIL<---------ARR14(2)            <--------P                                       --------->ARR11(3) xxxx>smallRNA(si3)                  <---------MYB46(3)                                 --------->AHL20(1) >smallRNA(le3)                  <-----------RAV1(2)                               --------->ARR11(3) xx>smallRNA(le3)               <-------TEIL  ----------->GT1                      <---------ARR11(3) >smallRNA(le3)                --------->CCA1(2)                <-----------GT1  <---------YAB1 <---- x>smallRNA(si3)            xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)      --------->YAB1--------->AHL20(2)   acatattataagatttgcttatatatagaatagatacaggggttggaatagaaaaaatttagtagttaacaattcataatatcaagataatatataggaa  11255900  Previous    Next  AGI:  At4g21080.1    Description:  Dof-type zinc finger domain-containing protein. Identical to Dof zinc finger protein DOF4.5 (DOF4.5) [Arabidopsis Thaliana] (GB:O49550); similar to Dof-type zinc finger domain-containing protein [Arabidopsis thaliana] (TAIR:AT4G21040.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN75830.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43572.1); contains InterPro domain Zinc finger, Dof-type; (InterPro:IPR003851) Range:  from: 11254613    to: 11255362    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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