Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      <---------ZAT6                                 --------->DAG2                                <---------ZAT14                     --------->AHL20(2)                                ---------->DOF2                     <---------AHL20(2)                 --------------->AGL15                           <---------GLK1(2)                 <---------------AGL15                <---------AHL20(2)                <-----------------AGL3               <---------AHL20(1)                        ------                ----------------->AGL3               --------->AHL20(2)                ------>ZmHOX2a(2)                <-----------------AGL2               <---------AHL20(2)<---------YAB1 <------ZmHOX2a(2)              <-----------GT1----------->GT1      --------->YAB1 --------->ARR11(3)  <---------ARR11(3)    --------->AHL20(2)     ---------->DOF2     --------->YAB1    <---------ARR11(3)  --------->AGP1    <---------AHL20(2)    <------ZmHOX2a(1)    --------->TOE2(3) <---------ARR14(2)  <---------AGP1 ----DOF2<---------ICU4 <---------TOE2(3)     <---------YAB1     --------->ARR14(2)  --------->ARR11(3)   atgcattaaaatcatttttctaaatttaggaaagtaaagtgttagattacgataataaaattttgcagattttatttttaaaatttagatctataacttg  10345800                                                                     <---------AHL20(2)                                                                     --------->AHL20(2)      ----------->GT1                                             ------->TEIL <---------AHL20(2)                                       ---------->DOF2 <---------AHL20(1)                                     --------------->AGL15 --------->AHL20(1)                      <---------ZAT6 <---------------AGL15                  ------ --------->AHL20(2)                     <---------YAB1 ============================================== ----->GT1                     ----------->GT1         ----------------->AG  ----------->GT1  <------   taataaatttgttaaactaatatttgttatatgtagtgaattagtattagattgtttaccaaaagatgtatttatttttctgtaaaaaaaactcttatca  10345900                                       <---------YAB1                                      --------->AHL20(1)                                      --------->AHL20(2)                                      <---------AHL20(2)                                 --------->AHL20(2)                                 <---------AHL20(2)                                 <---------AHL20(1)                                 --------->AHL20(1)                                --------->AHL20(2)                             <---------YAB1                            --------->AHL20(1)                            <---------AHL20(1)                            --------->AHL20(2)                 <---------AHL20(2)                          <---------ATHB12                    --------->AHL20(2)                       --------------->AGL15                  <---------AHL20(1)                   --------->CCA1(1)  <---------AHL20(1)      <---------AHL20(2)                   --------->RVE1(1) --------->YAB1        <---------ICU4                     <------           <---------ANAC58 <---------AHL20(2)            <---------YAB1                      -------  --------->AHL20(2)  ----------------->AGL3              --------->ICU4            <-------TEIL  <--  <---------AHL20(2)  =============================================================================== --->YAB1  <---------ANAC46--------->YAB1 XXXXXXXXXXXXXXXXXXXX>MIR870              --------->CCA1(2)< =======================================MADS_MADS       --------->YAB1  --------->YAB1     <---------ANAC46 ---YAB1   <---------ANAC58--------->AHL20(2)        <----------DOF2   <---------YAB1   <-----------RAV1(1)   aaattttaatatttcttgaaaatatccaattatattaaattataatttagtatttctttgataattaatttctatgatatataagatacaatgttgtgga  10346000                  --------------->AGL15                         <---------RVE1(1)   <---------HSFB2a(2)               <-----------GT1            <---------CCA1(1)   --------->HSFB2a(2)              <-----------GT1            --------->ARR11(3)              ------ ---ZAT18   <---------ARR14(2)      <---------AHL20(2)      <---------HSFB2a(2)                ------ -->ZAT18   --------->ARR14(2) <---------AHL20(1)           --------->HSFC1(1)          ---------->DOF2 --------DOF2     <---------------AGL15 <----------DOF2     --------->HSFB2a(2)        <---------AHL20(2) =================================MADS_MADS           <-----------GT1 <---------YAB1 ----------->TBP ---------YAB1 <---------YAB1>>>>>>>>>MYB98     <---------MYB59<---------ARR11(3)  <-----------TBP   cttttatagaagaaaatatgcttatttgagtaacatatttaacttttggacctattttacttctagatatttatgaattgtgagtatatataaagacatg  10346100                                                                     --------->TOE2(3)                                                                    ----------->GT1                                                       <----------DOF2                        <------                                                      <---------ANAC58                    <---------TOE1(3) --->ANAC58         ----------->GT1                   <---------ANAC58     --------->YAB1 <---------TOE2(3) --->ANAC58  ------------>CBF                 ---------->DOF2 ------>ZmHOX2a(2)*TSS --------->ICU4   gaacttcacaagagttgcaatactgtatatatgagaaaaaaaacaagttaaagagtgcttttgatccaaaatgttaaacatgagcaaaaatgaaggttca  10346200                                                                      <---------ANAC58                                                                      <---------ANAC58                                                                      <---------ANAC46                                                                    --------->ARR11(3)            <--                                                                    <---------AHL20(2)           <---                                                                 --------->AHL20(2)             -----                                                                 <--------ATHB1                ------                                                                 --------->ATHB51              <-----                                                 <----------DOF2 <---------ICU4                <-----                                   --------->CCA1(2)        <-------TEIL                      <------                                <---------YAB1<---------ARR11(3)<---------ATHB12     <------NtERF2---  --------->TOE2(3)    --------->AtMYB61      --------->ARR11(3)<---------ATHB51  --------->At4g35610 -TEIL    --------->YAB1       <---------TOE2(2)------>ZmHOX2a(2)--------->YAB1   --------->RAP2.6(3)   ttaacctcagtatcatatttcatcaccacaacgtatgatatggtcgatgatctttcattagattcaataatttcttggagccagagcggcaagagtttca  10346300          --------->LBD16                                                <----------DOF2 -------ICU4                                                     <----------DOF2 ------YAB1                                          --------->ANAC58 <-----------GT1 ---------->AGL15                                    --------->ANAC58---------->ID1 --->YAB1<---------HSFB2a(2)                 --------->At4g35610 <---------DAG2 ------------AGL1                            <---------At4g35610<---------DAG2 ------------AGL3                        --------->GLK1(2)    --------->ARR11(3) -TEIL   --------->HSFB2a(2)            <---------GLK1(2)     <---------ARR11(3)                 <--- ------>ATHB12      <-----------GT1     --------->ARR11(3)   <-----------GT1  <----------DOF2    <---   tcatttggaatccagaagaattttacaacaatcttcttcaaagattctgcttccaacgcataaatacctttttctctttccttttttcacatgtaagtta  10346400            --------->TOE2(3)                                     <---------DAG2 <---------HSFB2a(2)            <----------DOF2                                       <----------DOF2--------->HSFB2a(2)     <---------YAB1                                        ------->TEIL    <---------TOE1(3)    ----- ------ANAC46               --------->YAB1                <---------CCA1(2)<---------TOE2(3)    <---- ------ANAC55(2)           <---------YAB1             <----------DOF2   <---------MYB52(1)     <-----   cttatatatgattactttagtaagatgtcatcatagatagttttgtattctctcaactttgaatcttccttttcgttagggtttcagaaaaatcgactct  10346500                                            <---------At4g35610                                            --------->bZIP60(2)                                        <-----------HVH21            <---------HSFB2a(2)         <-----------TGA1        --------->ARR14(2)             --------->bZIP60(2)          --------->bZIP60(1)        <---------GLK1(1)              --------->ANAC46             <---------bZIP60(1)        --------->GLK1(1)            <---------DOF5.7(2)            <---------TGA2(1)       <--------        <---------ARR14(2)          <---------WRKY38(1)      <---------YAB1           <-------TEIL ---->HSFB2a(2)     <---------YAB1  <---------WRKY12      <---------YAB1           ----------->GT1--- -----HSFB2a(2)   --------->YAB1    <---------WRKY45     --------->TOE2(3)       <------ZmHOX2a(1)--- ----LBD16  --------->HSFB2a(2)    --------->WRKY18(1)<-----------GT1         <-----------RAV1(2) <--   ggaaaatgggaattcgcgaatgataattttgtgcgaggtcaacgtcacctcataaataacattataagtgatgtaatagagcaggaggttcaatatgatc  10346600                                          <---------ZAT6                                        ----------->GT1                                   --------->ANAC58                           --------->ATHB12               <------ZmHOX2a(2)             --------->TOE1(3)                           --------->AHL20(2)            <---------ARR11(3)           ------>MYB46(1)                           <---------AHL20(2)   --------->DAG2      --------->bZIP60(2) --------->TOE2(3) -YAB1   ----------->GT1   --------->ATHB51     <---------------AtSPL8         <---------MYB52(1) ------>ANAC58            <---------AHL20(2)   ---------->DOF2     ------>NtERF2      -------->P ------>ANAC58---------->DOF2    <---------AtLEC2       <------ZmHOX2a(1) --------->MYB52(1) -------TOE2(3)    ----------->GT1 --------->ANAC58 <-------TEIL  <---------ALFIN1    ------>MYB83  <   aaggaatggaattgtttaaagcagaaaaattatttgcacgactagtgaaaaaagtacaggatcaattgccacctcataacagttatccaacctcaaaact  10346700  Previous    Next  AGI:  At4g18870.1    Description:  heat shock transcription factor family protein. similar to AT-HSFA4A (Arabidopsis thaliana heat shock transcription factor A4A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT4G18880.1); similar to heat shock factor [Nicotiana tabacum] (GB:BAA83711.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterPro:IPR000232) Range:  from: 10346179    to: 10347239    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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