Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                               <---------------AGL15   <---------ARR14(2)                                                    --------->GLK1(1)     <---------WOX13(1)                                                    <---------GLK1(1)   --------->ATHB12                                                 --------->ANAC58      <---------YAB1--------->ARR14(2)              --------->At5g28300                --------->ANAC46    <------ZmHOX2a(1)    ---------->DOF2          ----------->RAV1(1)       ----------->HVH21       <-----------------AGL2   --------->GLK1(2) ---------->DOF2      ------>ZmHOX2a(1)          --------->ANAC58   XXXXXXXXXXXXXXXXXXXX>MIR864-5P ------->TOE2(3)     --------->TOE2(3)        --------->TOE1(2)   <---------LBD16----------------->AGL1   acctaaagaatgccacagtaattcctaaattgttctaagtgacataaacccaagaaatccattctatttcaggatgattgacttccaaatctgaaagaaa  7938200                                                                                  --------->AHL20(2)                                                                              <-------TEIL                                                                             <------ZmHOX2a(2)                                                                            --------->AGP1     ------>MYB83                        ----------->RAV1(1)                <---------ARR11(3)     ------>MYB46(1)                     --------->MYB52(1)                 <---------ARR14(2)   <---------MYB46(2)         --------->MYB52(1)--------->AHL20(2)          --------->ARR11(3)   <---------MYB59<---------GLK1(2)   ------------------------>ANAC81       --------->ARR14(2)   ttagacctaactcgttgtcaaattcttcgtactaactgaagaacaacagattaaaaaaaaaaacacatttcattctaagatccataaatttctaagaagg  7938300                     --------->ZAT2       <---------ARR14(2)                     <---------At4g35610  --------->GLK1(2)                     <---------ZAT2       --------->ARR14(2)                     --------->At4g35610  <---------ARR11(1)                   ------>NtERF2          ------->TEIL                  --------->DEAR3(1)     <---------ARR14(1)                 <----------CDC5      <---------------------WRI1                <---------At4g35610  <---------DOF5.7(2)                <------NtERF2       <---------WRKY38(1)                ------>NtERF2       <---------WRKY12                --------->At4g35610--------->DOF5.7(2)              --------->ATERF1(1)  <------NtERF2              --------->SPL7      ------>NtERF2             --------->TCP16(2)   <-----------HVH21             <---------ATERF1(1) <---------ANAC46            --------->ARR14(2)  <------NtERF2            <---------ARR14(2)  --------->RAP2.3(1)            <-----------HVH21  ------>NtERF2            <---------TCP16(1) <---------RAP2.3(1)            <---------PCF5    <---------RAP2.6(2)          <---------DEAR3(2)  <---------RAP2.3(3)     <---------At4g35610          <---------MYB46(3)  --------->bZIP60(1)     --------->ZAT2                       <---------MYB46(3)         <---------ANAC58     <---------bZIP60(1)     <---------ZAT2                       --------->MYB55(2)         <---------ANAC46     <---------DEAR3(1)      --------->At4g35610            <-----------HVH21         --------->ETT(1)    --------->RAP2.6(3)      <---------GLK1(1)        <---------ANAC58         <---------ANAC58   --------->MYB52(1)  <---------AtLEC2               <---------ANAC46  <---       <-----------HVH21   ----------->TGA1--------->HSFB2a(1)                 <---------ANAC58------      <-----------RAV1(1)  ----------->HVH21 <----------DOF2        <---------MYB52(2) <---------WRKY12   gacacttactgtcgggtccgccgagctgagtgacggcgtcaacgaatctttcatggagctcagaggtccaacgaaggcgaggcttggggtcagtggttag  7938400                              <-----------HVH21                             <---------ANAC55(2)                             <---------ANAC46                             <---------ANAC58            <---------HSFB2a(2)                             <---------ANAC58            --------->HSFB2a(2)          <-------TEIL                          --------->ARR14(2)    --------->At4g35610               ------>NtERF2                        <------MYB46(1)         <---------At4g35610         --------->ARR14(2)                        <---------MYB46(3)      <---------ZAT2              <---------ARR14(2)                        <------MYB83            --------->ZAT2<------ZmHOX2a(1)  --------->DEAR3(1) ---ZmHOX2a(1)      --------->ATHB12<---------ZAT14  --------------->AGL15 <---------GLK1(2) --->MYB59         ----------->ARR10--------->ZAT14------>NtERF2         <---------MYB59       <-----   gaccagacaagcgtcgatgggaagattggttccgtcagagtagtctcccaagctgccatctagaggaagcgaagaccgaatcgccgagtacattcttctt  7938500                                                            --------->DAG2                                                        --------->LBD16              --------->MYB46(3)                       --------->LBD16       ---------->DOF2                       <---------At4g35610 ---------->DOF2              -------    --------->ANAC46                      <---------LBD16  ---------->DOF2                    <------  <-----------------AGL1        <----------DOF2        <---------LBD16              <---------ARR11(3) ------>ZmHOX2a(2) <----------DOF2<---------AHL20(2)  <---------LBD16               --------->ARR11(3) -----DOF2 <----------ID1   <---------MYB52(1)       <---------LBD16 ---------->DOF2--------->AHL20(1)   tgatccccacaaaggaacaaacttttcttcgtttcttttattttctcggctgttttcccgggaaagtgaaagaaagtgtgaagaaagatattgtggattt  7938600                                                                                   --------->AHL20(2)                                                                                   <---------AHL20(2)                                                                                  --------->AHL20(1)                                                                                  <---------AHL20(2)                                                                                  <---------AHL20(1)                                                                                  --------->AHL20(2)                                                                           <------------CBF                                                                          --------->ATHB51                                                                          --------->ATHB12                                                                          -------->ATHB1   <---------CCA1(1)         ----------->ARR10         *TSS<---------ALFIN1                  <---------YAB1    <---------RVE1(1)     <---------At4g35610         --------->ANAC58                       <----------DOF2   --------->ARR11(3)     --------->At4g35610--------->ATHB12                              <---------ZAT18     <---------ARR11(3) -->GLK1(1)           <---------WOX13(1)        ----------->GT1       --------->ZAT18    <<<<<<<<<RAP2.2 ---GLK1(1) --------->CCA1(2)    --------->ANAC58              <---------YAB1 <---------AHL20(2)   ctaagacagcgaagaaacgagttgatagattggacaagacaacactcggatagtattttgtgtttatatttgtgcattattgaatttatttagatatttt  7938700                                                                                                  <--                                                   <---------AtLEC2                              ----                                          <-----------GT1                                     -------                 <---------At4g35610   --------------->AtSPL8                            ----------->GT1                 --------->At4g35610 --------->MYB52(2)                              --------->DAG2        ---------->DOF2   <---------TOE2(3)    <----------DOF2                      ---------->DOF2   caaaaaaaaaaaaagagagagcagaatttatgttttggttatttgtactctttgcattgaaattccaaataacatatatgttttgaaaaagtagtaagat  7938800                   <-----------GT1                                                                  -              <---------YAB1                                      --------->ALFIN1    <-----------GT1     <----------DOF2                                       --------->TOE2(3)      --------->YAB1    < -------AHL20(2) <---------YAB1                            --------->YAB1    ----------->GT1      --- ----->AHL20(2) <---------AHL20(2)                      <---------CCA1(2)--------->MYB52(1)------>MYB83 ---->GT1     --------->ICU4                       <---------ARR11(3) <---------At4g35610  ------>MYB46(1)   aaaatttcttttagttattattttcgtttttcaatagcagaataaaacttcaagttctctatcttaagatggtgctaactgctaaaataaaccaaatgaa  7938900                                                                                 --------->AHL20(2)                                                                          <<<<<<<<<<GT-3b                                                                        <---------YAB1                                                    -------->P        <---------AHL20(2)                                                    ------>MYB46(1)   -------->ATHB1                                                    ------>MYB83      --------->AHL20(2)                             --------->AHL20(2)   --------->TOE2(2)   --------->ATHB51                      <---------AHL20(2)          --------->TOE1(2)   --------->YAB1                      --------->AHL20(2)   ------>ZmHOX2a(1)          <---------ICU4             --------->ARR14(2)        --------->ARR14(2)             <--------HAHB4     --------->AHL20(2)<---------AHL20(2)  <----------DOF2           <---------ATHB51               - ---------->GT1       <---------AHL20(1)  --------->TOE2(3)          <---------ATHB12--------->AHL20(2) ----------ID1   ------>ZmHOX2a(1)     <---------ARR14(2)            --------->ICU4  <---------AHL20(2) ------->DOF2<---------ZAT18 <---------AHL20(2)<-----------GT1 <-----------GT1<----------DOF2 -------   aaaagaaaaaaatagggtcctcaatttttttttaaatatcaaatcctttaaacctactagacatttttccaattatttttcttttatataattcaagaga  7939000                                                                          --------------->AGL15                                       <---------YAB1                     <---------------AGL15                                     <-----------GT1                     ----------------->AGL1                             <---------ICU4                              ----------------->AG ------- --------->DAG2          <---------AHL20(2)                              ----------------->AGL3 --------->DOF2<----------DOF2--------->AHL20(2)                         ----------------->AGL2   <-- ---->GT1<----------DOF2 --------->AHL20(2)                --------->ANAC55(2)      ----------->RAV1(1)   aaaaaagtattctttagctttagttttttaatttttatattactattgacaaaatttgtttatgtaatagcagtttccaaattcagccacataaaacatt  7939100  Previous    Next  AGI:  At4g13640.1    Description:  UNE16 (unfertilized embryo sac 16); transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G24120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO43550.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 7936588    to: 7938635    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At4g13650.1    Description:  pentatricopeptide (PPR) repeat-containing protein. similar to pentatricopeptide (PPR) repeat-containing protein [Arabidopsis thaliana] (TAIR:AT5G09950.1); similar to pentatricopeptide, putative, expressed [Oryza sativa (japonica cultivar-group)] (GB:ABA99524.2); similar to hypothetical protein OsJ_035025 [Oryza sativa (japonica cultivar-group)] (GB:EAZ20816.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO23492.1); contains InterPro domain Pentatricopeptide repeat (InterPro:IPR002885) Range:  from: 7938963    to: 7942894    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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