Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                      --------->ZAT6                  <                                                               <---------ICU4                <-------                                                       <---------ARR14(2)                    <-------                                                       --------->ARR11(3)                   <--------                                                       --------->GLK1(2)                    ---------                                           <----------DOF2     --------->YAB1               <--------           <----------DOF2        --------->YAB1   <---------AHL20(2)                     -----------       <---------CCA1(2)         <---------YAB1    --------->AHL20(2)                     <---------TOE2(3)   ttccaacttatctcttttttttaaaaagtttttttatcataaaaactttatatttaaaatctggataatgacactattactacaattttgctaagatatt  7042200                                                                        <---------TOE2(3)         <---------TOE2(3)                                            <---------AHL20(2)    <----------DOF2                                                   --------->AHL20(2) -----------GT1    <---------YAB1                                    <---------YAB1 --RVE1(1)    <---------ICU4                                       --------->ATHB51               --- --CCA1(1)    --------->ATHB12                 --------->GLK1(2)   <--------HAHB4               ----- -ARR11(3)    --------->YAB1    <---------AHL20(2)                 <---------ICU4              ------ >ARR11(3)   --------->ICU4    --------->YAB1  ------->TEIL       --------->ICU4              ------- -AHL20(1)   <---------YAB1   <---------YAB1  <---------ARR14(1)  <---------YAB1        --------->TOE1(2) >ARR10 <-----------GT1--------->YAB1         <---------GLK1(2) --------->YAB1          --------->TOE2(2)   tgtttcctttttacgatgattacaattagactataatattggataaacgaatctcaaatattgaattcataattaatgttgaacataaaacataagaaaa  7042300                                                                    --------------->AGL15                                                                    <---------------AGL15                                                                   ----------------->AGL1                            <---------ICU4                         ----------------->AG       ---------->DOF2   --------->YAB1                            ==================================  --------->AHL20(2)    --------->KAN4(1)                     <---------ICU4             --------->STY1(2)  <---------AHL20(2)   <---------KAN4(2)                      --------->YAB1        --------->ARR11(3) ------>AHL20(2)<---------At4g35610              <-----------GT1 <-----------GT1    <---------ARR11(3) ------>GT1     --------->At4g35610          <---------DAG2  <---------AHL20(2)     --------->GLK1(2) --->DAG2     <---------WRKY12               <----------DOF2 --------->AHL20(2) --------->YAB1<------ --->DOF2     <---------WRKY38(1)      --------->WOX13(1)  --------->TOE2(3)   <---------YAB1 <------   gtaattaaaaaaagagtcaactcagaataatcaattcgagtctatcactttattccactcacattaattaccaaaaatgttatgaaaatctagatagcgt  7042400                                                                  ---------->DOF2                                                        --------->HSFC1(1)                                                        --------->HSFB2a(2)                                                        <---------HSFC1(1)                                                        --------------->AGL15                                                        <---------HSFB2a(2)                                                   <---------HSFB2a(1)                                                   <---------HSFC1(2)                                                   --------->HSFC1(2)            --------->ANAC58                          ------------------------>ANAC81--------->LBD16   ----------->RAV1(1)                      ----------->GT1      ---------->DOF2   ---------->DOF2  --------->ARR14(2) =======================================================================MADS_MADS--------->ANAC58   - ---ANAC58         ---------->DOF2    ----------->GT1  <---------LBD16  --------->ANAC58     -------- ---ANAC58  ----------->GT1      ---------->DOF2   --------->HSFB2a(1)  --------->ANAC58     <-------   ttcacatattcacagggtcaaaaaaggaaataacaaaaagaagaaaaaagagaaacttctggaaaaagaaaaggaagccacatacgctcttctagcgcat  7042500                                  <----------DOF2                                  <---------DAG2                           <----------DOF2                           <---------DAG2           <-----------GT1                               <--                          <---------DAG2          <---------DAG2                                 ====       <----------DOF2--------->PCF5   <---------AHL20(2)                              <---------YAB1 ----->ZmHOX2a(1)     <---------PCF2   --------->AHL20(2)                            <---------AHL20(2) ->ZAT18              --------->TCP16(1)<---------AHL20(2)      <<<<<<<<<TBF1 <----------DOF2    <--- --ZAT18       <----------DOF2 <-----------GT1    <----------DOF2  <<<<<<<<<TBF1    <---------AHL20(2)   tcctatactctttccttctttgtggtccccttttcacttttttaaattccaactttacccttgttcttcttcttcgttctcttttttttatttttgtttt  7042600                       =================HOX2a_HOX2a                      ==================HOX2a_HOX2a                                   --------->ANAC46                      <------ZmHOX2a(2)                                        --------->ARR14(2)                     --------->ARR14(2)                                     <---------HSFC1(1)               --------->HSFB2a(1)                                          --------->HSFB2a(2)               <---------HSFB2a(1)                                          <---------HSFB2a(2)             --------->ARR14(2)                                          --------->GLK1(2)          <---------HSFC1(1)                                            --------->KAN4(2)          --------->HSFC1(1)                                           --------->KAN4(1)          --------->HSFB2a(2)                                          <---------KAN4(1)          <---------HSFB2a(2)                                          <---------HSFB2a(1)         <---------LBD16*TSS                                           --------->HSFC1(2)        ----------->RAV1(2)                                            <---------HSFC1(2) ----------------------ANAC81    ------>ZmHOX2a(1)                     --------->HSFB2a(1)  <-------- ===================RAV------>ZmHOX2a(2)           <---------YAB1     <---------KAN4(2)----------->RAV1(1) --------RAV1(1)     <---------ARR14(2)     <----------DOF2    ------>ZmHOX2a(1)xxxxxxxxxxxxxxxxxxxxx   tgttgttgtcttctggaacttccgatctgtctctcctcttctctctctttcttatcaatacgttcctctcagaacattctggaacttcacaacataatct  7042700                                                                                   <---------REM1(1)                                                                                 <------MYB83                                                                                 <------MYB46(1)                                                                                <---------DEAR3(1)                                                                                --------->MYB111(1)                                                                                --------->MYB111(2)                                                                                --------->MYB46(2)                                                                                --------->MYB55(2)                                                                                <---------MYB46(3)                                                                                <---------AtMYB61                                                                               <--------P                                                                              <-------GAMYB ---------                                                                             --------->ATHB12                                                                             <---------MYB46(3)                          --------->YAB1                                  <---------ANAC58  <--------                        <---------ARR11(3)                                <---------ANAC58  <--------                    <---------ANAC46                               <----------DOF2 <---------ANAC46 -GLK1(2)  --------->ZAT6<---------YAB1                       --------->GLK1(2)<---------MYB55(1) >smallRNA(se3)    <-------TEIL                        ----------->GT1 <----------DOF2      <--------   ctctctctctctatctctagcttcgtgatcatcgtgtgtctctgtgttcaatctggattgtgacaatctctttctttcttggttggtgtagattacgtca  7042800                                                       <----------DOF2                  ------>ZmHOX2a(2) >ANAC55(2)              <------MYB83 <---------DEAR3(1)                               --------->GLK1(1) -bZIP60(1)              <------MYB46(1)         <---------HSFC1(2)                    <------ZmHOX2a(2) -ANAC55(2)          --------->ARR14(2)          --------->HSFC1(2)                   --------->ARR11(3) -ANAC46             <---------ARR14(2)     <---------WOX13(1)                        <---------ARR11(3)   agagagagatagagaagtttttggatttggttctaatgggtctgtgatagacgtttcctttctcttctctgtctagtttctgttttgagatctctatgtt  7042900                                             --------------->AGL15                                             <---------------AGL15                                            --------->YAB1                                            <-----------------AGL3                                            --------->TOE2(3)                                           <---------YAB1                     <---------ARR11(3)                                          <---------ARR11(3)                  <---------GLK1(2)                                          --------->ARR11(3)                  --------->ARR11(3)                                      <--------HAHB4                 ---------->DOF2                <                                      <---------ICU4                <------ZmHOX2a(1)               <                 --------->KAN4(2)   <---------YAB1                 ==========================HOX2a_HOX2a          ---------->DOF2   <--------P--------->YAB1              <---------TOE1(3)                <-   <----------DOF2   <---------YAB1  --------->ICU4               <---------TOE2(3)    ------>ZmHOX2a(2)   tccaactttcttcaaagctcattcccattggtagatttcatcattatcttaatttgggtattgggattaaggaaagtttagatttttgatctataactca  7043000                                                <-------GAMYB                                               <---------MYB46(3)                                               <---------DEAR3(2)                                              <---------AtMYB61                                              <---------DEAR3(1)                                             <------NtERF2                                            <---------RRTF1(1)                                            <---------ORA47(2)                                            <---------ERF1                                            <---------ATERF1(1)                                            <---------RAP2.6(1)                                            <---------DEAR4(2)                                            ------>NtERF2                                           <---------RRTF1(3)                                           <---------DREB2C(2)                                           <---------ATERF1(2)                                           <---------ANAC46<---------MYB46(3)                                           --------->ATERF1(2)                                           <---------RAP2.6(2)                                           <---------RRTF1(2)                                           <---------RAP2.3(3)                                           <---------RAP2.3(2)                                           <---------DEAR3(1)                                    <------NtERF2    --------->ZAT2                                   <------NtERF2--------->ATERF1(1)                                   --------->LBD16   <---------At4g35610                                 <---------ANAC46    <---------ZAT2                                 <---------LBD16<------NtERF2            <---------LBD16     <------NtERF2<---------ABI4(1)       <------NtERF2           --------->MYB52(1)  <---------MYB46(3)--------->ALFIN1   --------->LBD16          --------->MYB52(1)   ------>NtERF2<---------RAP2.3(1)     ------>NtERF2        <---------MYB52(2)  <---------MYB46(3)--------->ALFIN1     <---------LBD16                  <        --------->MYB46(3)  <---------DEAR3(2)<---------ANAC46     <---------ANAC46                 <  <------NtERF2            <---------DEAR3(1)--------->ATERF1(1)  <------NtERF2                    <- ------>NtERF2           ------>NtERF2    <------NtERF2  <-------GAMYB                             <- <---------LBD16        ----------->HVH21 --------->ATERF1(1)     <---------LBD16                 <-- --------->LBD16    --------->HSFC1(2)  --------->ALFIN1<---------MYB46(3)   <---------MYB46(3)  ---- ---------LBD16     <---------HSFB2a(1) <---------DEAR3(1) <---------REM1(1)<---------AtMYB61 <------ ---------ANAC46    <---------HSFC1(2)--------->ZAT2 --------->At4g35610    --------->ALFIN1  <------ --------LBD16--------->LBD16 --------->ALFIN1<---------DREB2C(2)<---------RAP2.3(1)          -------   tgccgggggaacaaaccggagaaactccgacggtggccggagttggcggcggtggagctggttgtagcgccgggaatagtggtggaagtagtggatgtgg  7043100  Previous    Next  AGI:  At4g11660.1    Description:  AT-HSFB2B (Arabidopsis thaliana heat shock transcription factor B2B); transcription factor. Identical to Heat stress transcription factor B-2b (HSFB2B) [Arabidopsis Thaliana] (GB:Q9T0D3;GB:Q9SCW3); similar to AT-HSFB2A (Arabidopsis thaliana heat shock transcription factor B2A), DNA binding / transcription factor [Arabidopsis thaliana] (TAIR:AT5G62020.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO63687.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82265.1); contains InterPro domain Winged helix repressor DNA-binding (InterPro:IPR011991); contains InterPro domain Heat shock factor (HSF)-type, DNA-binding; (InterP Range:  from: 7042624    to: 7044702    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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