Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                  <-----------HVH21                <---------------AGL15          --------->HSFC1(2)          <---------HSFC1(2)                                                             --------->HSFB2a(2)          <---------HSFB2a(1)                                                      --------->ARR11(3)          --------->HSFB2a(1)                 --------->YAB1                       <---------ARR11(3)         <---------KAN4(2)                   <---------ATHB12                   <-----------GT1       <------ZmHOX2a(1)            --------->ANAC58                           <-----------GT1   <---------ANAC46                 --------->ANAC58                          --------->AHL20(2) ------YAB1 <-----------GT1      <---------ATHB12    --------->GLK1(1)        <---------AHL20(2) ----   gcatagcgaggaattttccttcacatggaagagtaatcaagcatccaatgaacacatttccatctaaaaacctccaagaattaaacatcttctaaaattg  426500                                                                                                 ----                                                                                               <-----                                                                                              -------                                                           --------->HSFC1(2)                --------                                                           <---------HSFC1(2)               ---------                                                           <---------HSFB2a(1)              <--------                                                     ---------->DOF2                        <--------         <-----------GT1                  ---------->DOF2<---------GLK1(2)                  ---------       <---------WOX13(1)              --------->LBD16 --------->ANAC58                   --------->ANAC58 --------->ALFIN1                   --------->MYB52(1) --------->ANAC58                   --------->ANAC58 ------>DOF2        ---------->DOF2------------------------>ANAC81             --------->AHL20(2)----   aaagtgttgatttacaacctgcaaaaggccttataaaaaaccggcaaagaaaaccgaaagaaactccgaacaattcggaaattaaaaccggcaagatacc  426600         ---------->DOF2    ---------->DOF2 ----->ANAC46 ----LBD16 -->MYB52(1) ->CCA1(2) >ARR11(3)                                          --------->ICU4                  --------->CCA1(2) -ARR11(3)                                          <---------ARR11(3)             <---------ARR11(3) -ARR14(2)                    --------->GLK1(1)     --------->AHL20(1)             --------->ARR11(3) >ARR14(2) ----------->GT1    <---------GLK1(1)     --------->ARR11(3)         ---------->DOF2   <--- ----->LBD16         --------->TOE2(3)              <---------AHL20(1) ------>ZmHOX2a(1)        -----   ggaaacaaaagaaaagaaaaaaaacttaaatgaaatccgatttcaatcggagaaaatattaaacagagttttcctctctctcaaagataccagagagaac  426700                        <---------AHL20(2)                       --------->YAB1           <---------TOE2(3)     <---------MYB46(3)          ---------->DOF2 <-----------GT1                                                   ---------         <---------AHL20(2)     <--------P                                                 ----------         --------->AHL20(2)    <---------MYB52(1)                                     --------->YAB1  ----------->GT1<---------ARR11(3)                      ---------->DOF2              ----------->GT1 ------ALFIN1    --------->GLK1(2)              <---------AHL20(2)             --------->At5g28300 ---->MYB46(3)   --------->ARR11(3)          ----------->GT1                  ----------->GT1      <X   cacttggttaattaaagaaaatctattttaaccggttgtttaaaaaatagttaaatttggaaagaaaacagaagttgaaacggtagaatagtaaaaagta  426800                                                                                    <-----------HVH21                                                                                    <-----------TGA1                                                                                   --------->bZIP60(2)                                                                                   <---------TGA1a                                                                                   --------->bZIP60(1)                                                                                   <---------bZIP60(1)                                                                                   --------->TGA1a                                                                                   --------->ANAC58                                                                                   ==================                                <---------YAB1                                     --------->ANAC55(1)                            <---------ANAC58                                       <---------ANAC55(2)                            <---------ANAC58                                       ==================                          --------->AHL20(2)                                       --------->ANAC58                          <---------AHL20(2)                                       --------->ANAC46                       --------->ATHB51                                            --------->ANAC55(2)                       --------->YAB1                                              <---------O2                       <---------ICU4                                              ==================                       <--------HAHB4                                              <<<<<<<<<<HY5                       <--------ATHB1                                              --------->O2                       -------->HAHB4                                             <-----------bZIP911(1)                      --------->AHL20(2)                                          <-----------STF1                      <---------ATHB51                                           <---------ALFIN1                      --------->ICU4                                       <-----------RAV1(1)                      <---------YAB1                                       --------->ALFIN1                    --------->YAB1                  ---------->DOF2    --------->ZAT14           <---                   <---------AHL20(2)               =========================================bZIP_DOF >DAG2             --------->AHL20(2)            ============================================bZIP_DOF >DOF2            --------->AHL20(2)   --------->ANAC46                <---------ZAT14        <------ XXXXXXXXXXXXXXXXXXXXMIR447A/B<-----------GT1    <----------DOF2      ----------------------->TaNAC69(2)   atgaaacgtcttgttccctaattaataattacttacgattcacgaagtagactttaaagcccatactaccctctggactgtggccacgtcactctccttt  426900                           <------NtERF2                          ------>NtERF2                         --------->DEAR3(1)                         <---------DEAR3(1)                        --------->ATERF1(1)                  <---------ZAT2      --------->YAB1   <---------ATERF1(1)     <---------YAB1--------->TOE1(2)   <----------DOF2--------->ZAT2 =============bZIP_DOF----------->HVH21      --------->MYB52(1) ====bZIP_DOF     --------->At4g35610        <-----------GT1                                    ----- =========================bZIP_DOF           <---------DOF5.7(2)                           --------->ZAT14 --------GT1      <---------At4g35610       *TSS                                           <---------ZAT14 ----DOF2      ---------->DOF2  ---------->DOF2    <---------SPL7 --------->LBD16    <----------DOF2   aactactttgatagtcccaaagctgcgacggcgataaatcgatgaattaacgacgttcgaagaaactccagaggtctcttcattttccttttgtatactg  427000                                                                                                   --                                                                                                  ===                                                                                                  ---                                                                                                 ----                                                                                                 <---                                                                                                 ----                                                                                                 ====                                                                                                -----                                                                         ------>NtERF2          <----                                                                       <---------LBD16          -----                                                                     <---------ARR14(2)         <----                                                                     --------->GLK1(2)          -----                                                                     --------->ARR14(2)         <----        <---------AtMYB61                                           <---------GLK1(2)           <---- --------->ICU4            --------->LBD16             --------->GLK1(2) --------->LBD16       <----- ------>GT1       <----------DOF2----------->GT1       <-----------ARR10<---------LBD16        ------   gtaaaaattggtggtctcttctttgtctccgagtatggagaaaatgagagggaagcgaatcagaccaagagattccggcgagttagtcgaagatgggaga  427100 ---------->DOF2 --------->HVH21 ==========================HOX2a_HOX2a --->ZmHOX2a(2) ----->CCA1(2) ---ZmHOX2a(2) ----->At4g35610 ==========================HOX2a_HOX2a ---->AGP1 -----AGP1 ---->ARR14(2)                                                        ==============================HOX2a_HOX2a -----ARR11(3)                                                  ====================================HOX2a_HOX2a ---->ARR11(3)                                        --------->GLK1(2) -----ARR14(2)                                       <---------ARR14(2)     ========================HOX2a_HOX2a -----ARR14(3)          ---------->DOF2             <---------HSFC1(2)<------ZmHOX2a(1) ----GLK1(1)        <------ZmHOX2a(1)        ---------->DOF2    <------ZmHOX2a(1) <---------ARR14(2) --->GLK1(1)--------->SPL7       --------->YAB1     <---------HSFB2a(1)     <------ZmHOX2a(1)<------ZmHOX2a(2)   tctgaaagcgagcgtaagacgaggaagaaagagaatgatgttgtgagcaaaggaagaatcggaagaggaagaggaagaggagaggtttcgaagcgatcta  427200                                               <---------ANAC58                                               <---------ANAC58                                            <---------WOX13(1)                                          --------->YAB1                             <---------ANAC46                                          <---------ICU4                       <---------YAB1                                          --------->ATHB51                     --------->ICU4    ----                         ----------->GT1 <---------YAB1                      --------->YAB1  <-------                    --------->LBD16      <---------AHL20(2)               <----------DOF2    --------                   --------->LBD16 <----------DOF2  --------->AtLEC2 ------->TEIL<---------GLK1(2)   ttgaaatagacatttctaatcccgagaaggttaattcctttctataattgcttcattcaaatagatagatgaatctctttcatgattctgtggagttgtt  427300                   -------->ATHB1                   --------->AHL20(2)                   <---------AHL20(2)                   <--------HAHB4                   --------->ATHB51                  <---------ATHB51                  --------->ICU4                                      <---------AHL20(1)             --------->ANAC58                                         --------->AHL20(1)      <----------DOF2                                                 --------->AHL20(2)     <---------ANAC58    <---------At4g35610                          <---------AHL20(2)     <---------ANAC58    --------->At4g35610                  ----------->GT1 ----->AHL20(2)   <---------ATHB12                            <------MYB83                   -------- --MYB46(3)  --------->AtLEC2                                 <------MYB46(1)                -------- --->GT1     --------->ANAC58         <---------ANAC46<-----------GT1--------->AHL20(2)      <-------   aaaatttgctttctcatgcaattatttagctgcaaaatttgtgtgaatgttgtttatttcgatttggtgaattttatttgttcggatgtgatgagaatat  427400  Previous    Next  AGI:  At4g00990.1    Description:  transcription factor jumonji (jmjC) domain-containing protein. similar to transcription factor jumonji (jmjC) domain-containing protein [Arabidopsis thaliana] (TAIR:AT1G62310.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64660.1); similar to chloroplast DNA-binding protein PD3 [Pisum sativum] (GB:CAA67296.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO14387.1); contains InterPro domain Transcription factor jumonji (InterPro:IPR013129); contains InterPro domain Transcription factor jumonji/aspartyl beta-hydroxylase (InterPro:IPR003347); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 426944    to: 431821    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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