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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<---------
ARR14(2)
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ARR11(3)
<---------
ARR14(3)
<-
--------->
ANAC58
--------->
ARR11(3)
--
--------->
ANAC58
--------->
ARR14(3)
--------
---------->
DOF2
<-------
GAMYB
--------->
At5g28300
--------->
ANAC58
--------->
AHL20(1)
<---------
ANAC58
----------->
GT1
<-
--------->
ANAC58
<---------
AHL20(1)
<---------
ANAC58
<---------
LBD16
<--
--------------->
AGL15
--------->
AHL20(2)
--------->
RVE1(1)
<---------
At5g28300
->
DEAR3(1)
<---------
ARR11(3)
<---------
ANAC58
<-----------
GT1
---
>
RAP2.3(1)
<---------
AHL20(2)
<---------
ANAC58
<---------
GLK1(2)
---------->
DOF2
-------------
WRI1
--------->
AHL20(2)
<---------
ANAC46
--------->
ANAC46
<---------
TOE2(3)
--
ttaaaccaagtaaagcaaatcgaatatattgttcaaaaaaattccttgtgcgttgaatatcttgatatacagaatatcaattttacggtaaaaaggagta
22158900
<---------
AHL20(2)
--------->
AHL20(2)
<---------
AHL20(2)
--------->
ATHB51
<---------
ICU4
--------->
ICU4
<---------
AHL20(2)
--------->
AHL20(2)
<-----------
GT1
--------->
AHL20(1)
<---------
AHL20(2)
--------->
AHL20(2)
--------
AHL20(2)
<---------
HSFB2a(2)
<---------
AHL20(2)
------->
AHL20(2)
------->
GAMYB
--------->
AHL20(1)
--->
GT1
<-----------
GT1
<---------
AHL20(1)
--------
ICU4
--------->
YAB1
<---------
AHL20(2)
-------
YAB1
<---------
WOX13(1)
--------->
AHL20(2)
>>>>
------>
ICU4
xxxxxxxxxxxxxxxx>
smallRNA(i)
--------->
YAB1
<-----------
GT1
-----
------->
ATHB51
<---------
YAB1
--------->
HSFB2a(2)
----------->
GT1
--------->
AHL20(1)
<-----
attatttagttaccaattgtgaatgatataactgtctggaataaatgcaaatgactagtaataaattaattattttgttaccaaaaacaaaatgggtttg
22159000
<---
<----------
DOF2
<-
<---------------
AGL15
--------------->
AGL15
====================
<---------
AHL20(2)
<-----------
GT1
-----
>>>>>
ARR2
--------->
AHL20(2)
<-----------
GT1
------
---->
ATHB12
<---------
ARR11(3)
--------->
ATHB12
<----------
DOF2
<------
----
YAB1
--------->
GLK1(2)
<----------
DOF2
----------->
GT1
<-----------
GT1
---------->
DOF2
attgtattgggccagtccaaaaatctgaagcccatttatgtctttaaacggatgaatggaaataaatcgatattactcttttacccttttaagccgattt
22159100
<---------
MYB52(1)
<-
<-----------
HVH21
----
<-------
GAMYB
----
---------->
DOF2
<----------
DOF2
-----
------>
ZmHOX2a(1)
<---------
MYB55(2)
-----
--------------->
AGL15
<----------
DOF2
-----
<---------
ANAC46
--------->
TOE2(3)
<---------
MYB52(2)
------
<---------
LBD16
<---------------
AGL15
------->
GAMYB
--------->
ANAC46
======
<----------
DOF2
<-----------------
AG
--------->
MYB46(3)
<-----------
GT1
------
<---------
DAG2
<---------
ARR14(2)
<------------
AtMYB77
<---------
ANAC55(2)
<------
---------
CBF
<---------
ARR11(3)
----------->
RAV1(2)
<---------
ANAC55(1)
=======
----------
GT1
--------->
GLK1(1)
<---------
At4g35610
--------->
ANAC55(2)
<------
ZmHOX2a(2)
===========================================
MADS_MADS
------>
NtERF2
<---------
ANAC46
--------
---->
ATHB12
<---------
GLK1(1)
----------->
GT1
<---------
At4g35610
<----------
DOF2
<-------
--->
AHL20(2)
<------
ZmHOX2a(1)
<----------
ID1
<-----------
RAV1(1)
<---------
ANAC58
--------->
ARR14(2)
----
DOF2
--------->
LBD16
--------->
ARR14(2)
--------->
At4g35610
<---------
ANAC58
<---------
ARR14(2)
attgccttttgcgcagaaggatttcaaaatcctcaaaaggaaaaacagcaactgccgctctttctccgttacgtcttttcactctctgcaaatcggatcc
22159200
<-------
TEIL
--------
ALFIN1
-->
NtERF2
--------->
YAB1
--------->
AHL20(2)
----->
LBD16
<---------
AHL20(2)
---->
ANAC58
<---------
ATHB12
---->
ANAC46
<----------
DOF2
---->
ANAC58
------>
ZmHOX2a(2)
--->
MYB46(3)
<------
ZmHOX2a(2)
===========================
HOX2a_HOX2a
--------->
ARR11(3)
>
ZmHOX2a(2)
------>
ZmHOX2a(1)
<---------
ARR11(3)
---
ATERF1(1)
<---------
YAB1
<---------
AGP1
===========================
HOX2a_HOX2a
--------->
AGP1
-----
->
ARR14(2)
--------->
YAB1
<---------
CCA1(2)
<------
--
ARR14(2)
<---------
ICU4
<<<<<<<<<
TBF1
<----------
DOF2
--------->
TOE2(3)
------------>
CBF
gccactacaaattcatcatcatcctcgtcttcttcttctcttcaaatattaggctttgaaaagtttcaacatcaaatttagatctttcccaattaatccg
22159300
--------->
ARR11(3)
<---------
TOE1(2)
--------->
AHL20(2)
<---------
ANAC58
<---------
AHL20(2)
<---------
ANAC58
--------->
ATHB51
--------->
HSFB2a(2)
<---------
ICU4
------>
ZmHOX2a(2)
<------------
CBF
<---------
ANAC46
--------->
ICU4
<---------
ARR11(3)
---->
LBD16
<---------
HSFB2a(2)
--------->
YAB1
<---------
AHL20(2)
---
LBD16
------>
ZmHOX2a(1)
<-----------
GT1
<----------
DOF2
<---------
TOE2(2)
gtctattgcc
atgtcttcctcgaagaag
gttacgttcgattcacaatcttcatttcttctctttatgaaattatttctcgtatgatcttagtttttctct
22159400
------>
ZmHOX2a(2)
<---------
MYB46(3)
=================================
HOX2a_HOX2a
------>
ZmHOX2a(2)
=====================
HOX2a_HOX2a
<------
ZmHOX2a(2)
======================
HOX2a_HOX2a
--------->
DAG2
<---------
ARR14(2)
==================================
HOX2a_HOX2a
--------->
ARR14(2)
<------
ZmHOX2a(2)
----------->
GT1
--------->
LBD16
--------->
ARR14(2)
----------->
GT1
<---------
LBD16
<---------
ARR14(2)
<---------
TOE2(3)
--------->
ARR14(2)
<---------
GLK1(1)
--------->
ARR14(2)
<---------
MYB46(3)
<---------
ARR14(2)
------->
TEIL
<---------
ARR14(2)
<------
ZmHOX2a(1)
---------->
DOF2
<---------
GLK1(2)
<---------
LBD16
<---------
ATHB12
<------
ZmHOX2a(1)
<---------
LBD16
<---------
CCA1(2)
gatttcag
ggttccgatcggaatcaaatcaggaagtcgttgaggaagttaaaaaagcagattggggaattggagaaacttgaatctccggatcggttgaa
22159500
<-----------
HVH21
------>
ZmHOX2a(1)
--------->
ZAT18
<---------
bZIP60(1)
<---------
ZAT18
--------->
bZIP60(1)
--------->
ZAT14
<-------
GAMYB
---------->
DOF2
<-----------
RAV1(1)
--------->
YAB1
<----------
DOF2
---
<---------
ARR14(2)
<---------
ARR14(2)
<----
--------->
ARR14(2)
--------->
ARR14(2)
<---------
AHL20(2)
<---------
YAB1
-
<---------
CCA1(2)
<---------
ARR11(3)
<---------
ARR11(3)
--------->
AtLEC2
<---------
AHL20(2)
taatgtgaagcctatcttcatcaagcgca
gtatccttttctgttgtcacaagatgctatttttttttgtcatacaaaactgtggaatattatttgttttc
22159600
--------->
GLK1(2)
--------->
ARR14(2)
--------->
KAN4(2)
<---------
ARR14(2)
<----------
TaMYB80
<---------
KAN4(1)
--------->
KAN4(1)
<---------
ICU4
------
>>>>>>>>>
TBF1
<------
ZmHOX2a(2)
------>
ZmHOX2a(1)
<---------------
AGL15
--------->
ARR11(3)
------>
ZmHOX2a(2)
<------
MYB83
--------------->
AGL15
<---------
ARR11(3)
<------
ZmHOX2a(2)
<------
MYB46(1)
==========================================================================
<---------
ZAT2
<---------
AHL20(2)
--------->
YAB1
--------->
ARR11(3)
--------->
ZAT2
--------->
CCA1(2)
<------
ZmHOX2a(1)
--------->
ARR14(2)
------>
ANAC55(2)
--------->
ARR11(3)
<---------
TOE1(3)
<---------
ARR14(2)
-------
GT1
<---------
ARR11(3)
<---------
TOE2(3)
<---------
ANAC46
---------->
HVH21
<---------
TOE2(3)
---------->
DOF2
---------->
TaMYB80
<---------
TOE1(2)
acatgacgagcttggttttaag
atatatacttgaagaagaaactcaagaagaaagttaaggatcatggcatattctgttcttgctccttggatcctggtt
22159700
<---------
MYB46(3)
<------
NtERF2
<---------
RAP2.3(1)
------>
NtERF2
<---------
RAP2.3(3)
<---------
RAP2.6(2)
<---------
ARR11(3)
<---------
RAP2.3(2)
<---------
ARR14(2)
<---------
ANAC46
<-----------
ARR10
<---------
ATERF1(2)
<------
NtERF2
--------->
ARR14(2)
<---------
DEAR3(1)
<-----------
RAV1(1)
<---------
CCA1(2)
<---------
bZIP60(1)
<----------
DOF2
----------------->
AGL1
--------->
ATERF1(2)
<---------------
AGL15
<---------
HSFB2a(1)
<---------
ANAC58
<------
NtERF2
<----
--------------->
AGL15
<---------
ANAC46
<---------
ANAC58
--------->
RAP2.6(3)
--->
ARR14(2)
<---------
At4g35610
--------->
HSFB2a(1)
--------->
ANAC58
<---------
ANAC58
<-----
===================
MADS_MADS
<---------
KAN4(2)
--------->
ANAC58
<---------
ANAC58
<--------
cttcaactctttgtggcagcgattgcaattgtgg
gtatgttccatatctgatcacaagtacttgtctgactaaatattcgtggcggcattggttctgatt
22159800
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AGI:
At3g59960.1
Description:
ASHH4 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH4). Identical to Putative histone-lysine N-methyltransferase ASHH4 (ASHH4) [Arabidopsis Thaliana] (GB:Q9M1X9); similar to ASHH3 (HISTONE-LYSINE N-METHYLTRANSFERASE ASHH3) [Arabidopsis thaliana] (TAIR:AT2G44150.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO62064.1); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain AWS (InterPro:IPR006560); contains InterPro domain SET; (InterPro:IPR001214)
Range:
from: 22159311
to: 22161363
Orientation: Forward
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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