Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                      <                                                                                                    <                                                                  <------MYB46(1)                 <--        <---------HSFB2a(2)                                       <------MYB83                    <--        --------->HSFB2a(2)                                      <---------AtMYB61                ---       <---------LBD16                        ------>NtERF2   <-----------RAV1(1)                 ---  <---------MYB52(1) <-----------GT1   <----------DOF2    <----------DOF2                  <---------WOX13(1) --->DOF2 <---------MYB52(1)    ---------->DOF2      ----------->HVH21            ------>ZmHOX2a(1) < --WRKY45--------->LBD16      <---------HSFB2a(2) <---------ARR14(2)    ----------->HVH21<---------ICU4   gtccgtttgtccggaagttttttctaccaattccaaaaggcctttctcggcctatatgacctttgtgttggtccctgacttctcctatgactaattgctg  21717900    --------->ALFIN1 ---------ANAC46 ---------ANAC58                                                      <---------AHL20(2) -------ZAT14                                                         --------->AHL20(2) -------ZAT18                                                  <---------LBD16           --------->DAG2 ------>ZAT18          --------->YAB1              ----------->GT1   --------->AHL20(2) ---------->DOF2 ------>ZAT14<---------AHL20(2)       <---------AHL20(2) ------------>CBF          --------->TOE2(3)- ---------ANAC58   <---------AHL20(2)--------->AHL20(2) <-----------GT1     <---------ETT(1)  -------   tgccctgtgtgccatttttttttaatcagagttttctcattttatatatcaacaagttatacaatttcggattaaattccgacatcgtcaaaaaggaaga  21718000           --------->ZAT6          -------->P <------------CBF          ------>MYB46(1)        --------->AtMYB61       --------->MYB46(3)    <---------ETT(1)--------->ATHB12  <---------ANAC46 <---------ARR14(2) --------->ATHB51  --------->ANAC55(2) --------->GLK1(2) <---------AHL20(2) <---------ANAC58                            --------->ICU4----- --------->ARR14(2)<---------YAB1     <---------ANAC58              <------ZmHOX2a(2)        -------- -------->RVE1(1) <---------AHL20(1)  <---------ANAC55(1)  <---------YAB1    <----------ID1  <------- ---->GT1 ------>MYB83  <---------MYB46(3)   <---------TOE2(3)     <---------ARR11(3)    --------->TOE2(2)   aaaaatccgaccaactctaatattattggttatagtttttgcgtgttaacattttttagttaatatagagatcaaatttgggccaaaattatctacgaga  21718100                           <---------CCA1(1)                           <---------RVE1(1)       --------->YAB1                          <---------ARR11(3)       --------->AHL20(2)                          --------->ARR11(3)     --------->AHL20(2)                          --------->AHL20(1)     --------->AHL20(1)                       <---------TOE2(3)                          <---------AHL20(1)    --------->YAB1                      --------->AHL20(2)          <---------MYB52(2)      <---------At4g35610                     --------->TOE2(3)   <------ ----->DOF2            <---------TOE2(3)  ----------->GT1                 --------->YAB1 ---------->DOF2 ->HSFB2a(2)          ---------->DOF2    ----------->GT1             ------------>CBF<-----------GT1 --HSFB2a(2)    ---------->DOF2   --------->At4g35610           <---------PCF2<---------At4g35610   aagtctgtctcaactatccaaagttaaagatattttcgctgagaagttaaaaataatatttcgatgggcccttcaatcttagctaatttactaaagtaac  21718200                                                                                      <---------MYB52(2)                                                                                      --------->ANAC58                                      --------->ANAC46                                --------->ANAC58                                      --------->ANAC58                         <---------YAB1                     <---------AHL20(2)                                 <---------ANAC58                    --------->AHL20(2)--------->ANAC58               <---------CCA1(2)--------->ANAC46               --------->AHL20(2)   <---------ALFIN1      <---------CCA1(2) <---------YAB1 -----GT1------------------------>ANAC81             *TSS ---------->ID1<---------ANAC58   ccttgtcgaaaaatcaaaaatataaaatcgcaaaacgaacacggcttagtttatcttcttgtctctctctcatttcttgttattatccacgaacgaagaa  21718300                                                <---------ARR14(2)                                                --------->ARR14(2)                                               <------NtERF2                                              <---------RAP2.6(3)                                <---                                              --------->LBD16                                    ----                                              <------NtERF2                                      <---                                             --------->RAP2.6(2)                         --------->LBD16                                            <-----------------AGL2                      --------->ANAC58                                            ----------------->AGL1  <---------ARR14(2)  --------->ANAC58                                            <-----------------AGL1  --------->ARR14(2)  --------->ANAC46                                            <---------LBD16        <------ZmHOX2a(1)   ==============                           --------->YAB1   <---------ANAC46       ===========================HOX2a_HOX2a                    ----------->GT1        <XXXXXXXXXXXXXXXXXXXXMIR869.1               ------>ZmHOX2a(2)           --------->At4g35610      --------->ANAC58               --------->ATHB12    <---------LBD16 --------->TOE1(2)---------->DOF2   --------->ANAC58            <---------LBD16    ----------->ARR10   aaacctagaaaacagttgaagaaagaaaatcacaagagaagccatggccggaattggaccgattactcaggattgggaaccagttgtgatccgcaagaga  21718400                                                             <---------ARR14(2)                                                          --------->RAP2.3(1)                                                          <------NtERF2                                                         <---------RAP2.3(1)                                                         ------>NtERF2                                                         <---------ATERF1(1)                                                        --------->RAP2.3(2)                                                        <---------ANAC46                                                        <---------DEAR3(1)                                                       --------->DEAR4(2)                                                       --------->ATERF1(1)                                                       --------->RRTF1(1)                                                       <------NtERF2                                                       --------->RAP2.6(1)                                                       --------->ERF1                                                       --------->ORA47(2)            <---------ZAT2                             <---------ABI4(2)            --------->At4g35610                       <---------DEAR4(2)            <---------At4g35610                  ---------->DOF2            --------->ZAT2                ------>NtERF2--------->RAP2.3(1)         <---------At4g35610             --------->DEAR3(1)  --------->ARR14(2)   --------->MYB52(1)                  ------->GAMYB  <---------ATERF1(1)  ------>ZmHOX2a(1)                   --------->ANAC46<---------RAP2.3(1) ------GLK1(1) ---------->CDC5     <---------WRKY12  <---------RAP2.3(2) ----->GLK1(1)---------->DOF2    <-----------HVH21   <---------DEAR3(1)<---------HSFB2a(1) ------At4g35610  --------->ANAC46 <---------WRKY38(1)<---------ORA47(2)<---------SPL7          <---- ========HOX2a_HOX2a----------->HVH21 --------->DEAR3(1)--------->DEAR3(1)--------->SPL7    <--------   gctcctaacgctgcagctaagcgcgacgagaagactgtcaacgccgctcgtcgaagcggcgccgatattgagaccgttcgaaaatgtttgttttctttct  21718500                         <----------DOF2                        --------->TOE2(3)                      -------->P                                ----------->GT1                      ------->TEIL       <---------ANAC46      <---------TOE2(3)                    ------>ZmHOX2a(2)  --------->ALFIN1        <---------TOE1(3)                    < ------DOF2       --------->AGP1<---------ANAC58               --------->MYB59     ------->TEIL ----- --DOF2   <---------CCA1(2)     <---------ANAC58--------->GLK1(2)             <-------GAMYB     <----   ttctctatctccgtctctctgatctacctttgtagcttaagttgtgggagaatatttctctggtttaggttaaatttggcgattgaatctagatgagttt  21718600                                                 <------NtERF2                                                 <---------MYB52(1)                                                <-----------TGA1                                                ------>NtERF2                                                <---------RAP2.6(3)                                                <-----------HVH21                         <------MYB46(1)                                               --------->RAP2.6(2)                        <------MYB83                                               --------->RAP2.3(3)                       --------->MYB59                                               --------->ANAC46                        <---------MYB52(1)                                               --------->DEAR3(1)                <------ZmHOX2a(2)                                               <---------ATERF1(2)               --------->CCA1(2)                                              --------->ATERF1(1)               --------->ARR14(2)                                --------->MYB52(2)       <---------YAB1         <---------ARR11(3)                            ----------->GT1   <------NtERF2                     <---------ARR14(2)                           <---------TOE2(3)  --------->RAP2.3(1)               --------->AGP1                           <---------TOE1(3) <---------RAP2.3(1)               --------->GLK1(1)                      --------->ATHB12       <---------ATERF1(1) <-------GAMYB <---------GLK1(1) -----------GT1       <---------ICU4         ------>NtERF2      <---------MYB46(3)------>ZmHOX2a(2) ---->AHL20(2)       --------->ICU4         <---------DEAR3(1) <---------YAB1 ----------->ARR10 -----AHL20(2)       <---------YAB1         --------->DEAR3(1) <---------TOE2(3)--------->ARR11(3)---   tattacgctgtgttttagtttccatgattagggttatttgccttcgtcgccgtcactggattattgtggttgtcttagaagagatctgtgttaggttttc  21718700                         <---------ZAT14                         --------->ZAT14                      <---------At4g35610                      --------->At4g35610                     --------->MYB52(2)                 <---------ANAC46     <---------YAB1<---------MYB52(1) <-------GAMYB   <---------ANAC58              <-----------GT1               <---------TOE2(3) -------->RAV1(2)<---------ANAC58     <---------SPL7    <---------GLK1(2) <---------WOX13(1)   gcctgttgtgattcgaatttcgtttgctgcagtaacagttcgtccgattttacttatggattcttgttcgtatcagattgatgtttctgttttgacattt  21718800  Previous    Next  AGI:  At3g58676.1    Description:  unknown protein Range:  from: 21717796    to: 21717915    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g58680.1    Description:  ATMBF1B/MBF1B (MULTIPROTEIN BRIDGING FACTOR 1B); DNA binding / transcription coactivator. similar to ATMBF1A/MBF1A (MULTIPROTEIN BRIDGING FACTOR 1A), DNA binding / transcription coactivator [Arabidopsis thaliana] (TAIR:AT2G42680.1); similar to orf [Ricinus communis] (GB:CAA89698.1); contains InterPro domain Multiprotein bridging factor 1, N-terminal (InterPro:IPR013729); contains InterPro domain Lambda repressor-like, DNA-binding; (InterPro:IPR010982); contains InterPro domain Helix-turn-helix type 3; (InterPro:IPR001387) Range:  from: 21718253    to: 21719888    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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