Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                      --------->TOE2(3)               ----------->GT1                                   --------->REM1(1)                <------MYB83                          --------->ARR11(3)                        <------MYB46(1)                 --------------->AtSPL3     <---------At4g35610    --------->MYB59           --------                 --------------->AtSPL8--------->WOX13(1)  ------->GAMYB         --------->CCA1(2) -----DOF2 ---------->DOF2<---------ARR11(3)--------->At4g35610  <---------MYB52(1)      --------->At4g35610   ttgtgagagacataaaagttctgtacaacatcttcttacatcaattagctcccaaaatcaacagtctgtttggttaactatagatagaagaagctaaaag  20426500                                                                                        ----------->GT1                                                   <---------MYB59                      --------->YAB1                                                  --------->ANAC55(2)                  <---------YAB1                                                  --------->YAB1                 <-----------RAV1(2)    <---------TOE2(3)                             --------->ANAC46           <---------ALFIN1  ---------->DOF2                       <------ZmHOX2a(1)                  <---------ALFIN1 -->DOF2      <----------DOF2   --------->ZAT6   <-------TEIL             --------->MYB46(3)    <----   aacataaaggtttcatctttggtatcaattgctatcagtagaggagaaacatacataacttagaaaaattcttggaaccacactcaggtatgataaaact  20426600                                 --------->WOX13(1)         ---------->DOF2                         <                         <---------ZAT14                  --------->ANAC58                        ---                         --------->ZAT14                  --------->ANAC58             --------->TOE2(2)    --------->ZAT6  <---------ZAT2             <-----------GT1        <---------ATHB12----------->RAV1(2) ------DOF2         --------->ZAT2        --------->ATHB12--------->ANAC46       <---------ATHB12 <--   tttctaacacttgagataatcaagctgtgaacagtccatcacattgatttcacaaatttcacgaaagtctcaatctttcacaaatcaaacctgagtttgg  20426700                  <------NtERF2                --------->LBD16                <---------LBD16         --------->MYB52(2)       <---------MYB52(1)      --------->TOE1(3)      --------->TOE2(3)    <---------TOE2(3)    <---------TOE1(3)                                     <----------DOF2 ----------DOF2<---------LBD16                         ------>NtERF2      --------->DAG2 ------>At4g35610------>NtERF2              --------->At4g35610       --------->ANAC46<---------ETT(2) -------At4g35610--------->LBD16       ---------->DOF2<---------RAP2.6(2)---------->DOF2   agctctaacgttagtttcccggcgagactgaaacgcttggctaaagagctaacattgcgcctttgttgaaacccgaaaagcttcactgtcgaaatgcaga  20426800                                   --------->AtMYB61                                   ------->GAMYB                                   <---------ALFIN1                                  <---------MYB55(2)                                  <---------MYB52(2)                                  <---------ABI4(2)                                  --------->MYB46(3)                                 -------->P                              --------->At4g35610                              <---------At4g35610                             --------->ANAC58                                    <---------At4g35610                             --------->ANAC58                                    --------->RAP2.6(3)                         <---------ANAC58                                        --------->At4g35610                         --------->TGA1a                                        --------->ARR14(2)                         =================MYC_MYB                           --------->ZAT14                         <------NtERF2                                      <---------ZAT14                         <---------ANAC58                                   <---------At4g35610                         <---------ANAC46                                 *TSS  <---------ARR14(2)                         <---------TGA1a                             ------>NtERF2                ---                         ==================MYC_MYB                  <---------ANAC46              <--                        ------>NtERF2                               <---------DEAR3(1)            <--                       <---------ANAC46                             <---------RAP2.6(2)     <--------                       <---------ANAC58                            <---------LBD16<---------RAP2.6(2)   --------->At4g35610 <---------ANAC58                            <---------At4g35610   <------ZmHOX2a(1)   --------->GLK1(1)<---------DEAR3(1)--------->DEAR3(1)         <---------DEAR3(1) ------>NtERF2 ---   atagcatctccagccaaactggatggcgcgtgagcaaccaccgctcgtattatggactcgtgtttcgactgcggctagagcagagcggccaggaccagac  20426900               --------->MYB59            --------->ARR14(2)          <---------YAB1        <---------At4g35610     <---------At4g35610    <---------YAB1 --------->GLK1(2) ------>ARR11(3)         --------->MYB52(2)                       <---------WOX13(1) -------ARR11(3)       <---------MYB52(1)                        <------------CBF                <--- -------ARR14(2)      <---------MYB52(1)                       <---------YAB1                    <--- ---RAV1(2) <---------ARR14(2)                                 <---------AHL20(2)             <------ ------>ARR14(2) <---------SPL7      <---------AHL20(2)<---------MYB52(1)                  <---------ICU4   gatattctgatgctgattcggtccggtttgtttcggttttaaatttcagataaatcggtttgtttttaattgattttgtagatagccttccaattttgac  20427000                                    <---------ANAC58       <---------------AGL15        <---------ANAC58       <---------MYB59   <----------DOF2       --------->TOE2(3)<---------ANAC58        ----------->RAV1(1)    <-----------GT1     <---------ANAC46     --------->ANAC58 ------DAG2             <---------ANAC58     --------->ANAC58                       --------->TOE2(3) -------DOF2  ----------->GT1      --------->MYB52(2)                            <---------GLK1(2) -----GT1   ---------->DOF2       <-----------GT1                 ------>ZmHOX2a(1) --------->YAB1   tttttgataccttacaaagtgaaatggctttgagagttacttgcctctagcaacagtgtctgtgtctcctcatttttcttccacaatctcaatgcctcta  20427100                                                                              <---------AHL20(2)                                                                          <---------RVE1(1)                                            <----------DOF2               <---------CCA1(1)     -----                                      <---------TOE1(2)                  --------->ARR11(3)    ------                           --------->DAG2   <---------DAG2               <---------ARR11(3)   -------             <---------AHL20(2)    --------->ATHB12                     --------->YAB1 --------->ATHB12            --------->AHL20(2)    <-------TEIL                   ---------->DOF2  <---------YAB1-----    <-----------RAV1(1)   ---------->DOF2 <-------TEIL          ------>ZmHOX2a(1) <---------AHL20(2)   tttgaaatgttgcattaattttctgagtaaaagcgattcataggtgctttttgtatttccaatttcctaaagaatgatattttttttattgatggcaaaa  20427200        --------->TOE2(3)                 --------->TOE1(2)        ----------->GT1                   --------->TOE2(2)        <---------ICU4       ----------->GT1                 --------->WOX13(1)      ---------->DOF2               -------- ---->YAB1                           <---------ATHB12 --------->ANAC46      <---------ARR11(3)      < --->DAG2                           --------->ANAC58  --------->ANAC58<-----------GT1       <-------- --->DOF2                           --------->ANAC58  --------->ANAC58--------->YAB1        --------- ------>GT1  ---------->DOF2    --------->ANAC46      --------->ANAC55(1)   <---------AHL20(1)    ---   gtaatacaaatgttaaaaagaatacaattcaaatacacaatcaatctacgaattacaagtaatgaaaaagaattacaatatatgtttttggttttaggta  20427300                                                                                           --------->LBD16                                                                                          <---------ANAC58                                                                                          <---------ANAC58                                                                                        -------->P                                                                                        ------>MYB83                                                                                        --------->MYB52(1)                                                                                --------->ANAC46                                                     --------->ANAC58        --------->GLK1(2)                                                     ----------->GT1         --------->ARR14(2)                                              ------->GAMYB                  <---------ARR14(2)                                             --------->MYB46(3)             <---------GLK1(1)    ---- <---------ICU4                              <---------MYB52(2)     ------>ZmHOX2a(1)  --------->MYB55(1) ->ANAC55(2)                               ----------->RAV1(1)     --------->TOE2(3)  --------->AtMYB61 ---------YAB1         ------>ZmHOX2a(1)--------->ANAC58          ----------------->AG<---------MYB111(1) -TOE2(3)          <---------ALFIN1     --------->ANAC46          ----------------->AGL1------>MYB46(1) >MYB59           <---------At4g35610   --------->ANAC58        <---------ARR11(3)    <---------MYB59 ------>YAB1    <-----------GT1  <---------At4g35610 --------->ANAC58      <------ZmHOX2a(1)     ----   tcatcagtagtttcagtttcacctcctcttgtttttgctcccaagcaacaaacacaagtaaaacaaaatcctaaataggaatccgaaacctaccgtgata  20427400  Previous    Next  AGI:  At3g55080.1    Description:  SET domain-containing protein. similar to SET domain-containing protein [Arabidopsis thaliana] (TAIR:AT3G07670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41554.1); contains InterPro domain SET; (InterPro:IPR001214) Range:  from: 20422376    to: 20426874    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g55090.1    Description:  ATPase, coupled to transmembrane movement of substances. Identical to Probable white-brown complex homolog protein 16 (WBC16) [Arabidopsis Thaliana] (GB:Q9M2V7); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT2G39350.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT5G13580.1); similar to ABC transporter family protein [Arabidopsis thaliana] (TAIR:AT3G53510.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO18076.1); similar to stigma/style ABC transporter [Nicotiana tabacum] (GB:AAR06252.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO41559.1); contains InterPro Range:  from: 20427319    to: 20429529    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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