Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                --------->ATHB12              <---------ICU4              --------->ATHB51                                      <---------TOE1(3)             --------->ICU4                           --------->AHL20(2)     --------------->AGL15             <---------YAB1                           <---------AHL20(2)     <---------------AGL15          <---------YAB1                             <---------ATHB12       <-----------------AGL2 --    <---------CCA1(2)                                --------->ICU4 <---------TOE2(3)             ---  --------->ANAC46                  --------->At4g35610 <---------YAB1     <<<<<<<<<GATA-1        <-- -------->ANAC58        <---------ANAC46         <---------ZAT18  ---------->DOF2               ----- -------->ANAC58     <----------DOF2<---------At4g35610--------->AHL20(2) <-----------GT1   ------->TEIL -----HVH21--------->YAB1 <---------REM1(1) ---------->DOF2    <----------DOF2         --------->At4g35610   acacccataactctcattattgtctttggtgtagcctctgctcatatatagcgcaattaatatagctttaaaggtttatctatatagggagatgtatatg  4048200                                                   --------->ANAC46                                                 <---------DOF5.7(2)                                                <---------WRKY12                                                <---------WRKY38(1)                                               <------NtERF2                                               --------->DOF5.7(2)                                              ------>NtERF2                                              <-----------HVH21                                             <---------ANAC46                                            <------NtERF2                                            --------->RAP2.3(1)                                           ------>NtERF2    --------->MYB52(2)       <---------YAB1                      <---------RAP2.3(1)    <---------YAB1                        --------->bZIP60(1)    --------->ICU4                        <---------bZIP60(1)  --------->YAB1                          <---------RAP2.3(3) --------->ICU4                           <---------RAP2.6(2)         <-----------RAV1(1) <---------YAB1    <-----------HVH21      <---------DEAR3(1)<---------ANAC58 ------->YAB1     <----------DOF2        --------->RAP2.6(3)<---------ANAC58 ------>ICU4    ------->TEIL            --------->MYB52(1) <-------TEIL -------YAB1<---------------AtSPL3     ----------->HVH21<---------ANAC58                           <- ---->YAB1  --------------->AtSPL3     ----------->TGA1 <---------ANAC58   --------->PCF5        <---   atgatgatgatgaaaacgtactttcagggcctccaaggtgagtgacggcgtcaacgaagcgttcgtgaagctctgtggtccagcgaaggcgaggcttagg  4048300         <------ZmHOX2a(1)         =====================================HOX2a_HOX2a            ---------->DOF2     <---------ANAC46        --------->YAB1------>ZmHOX2a(1)      --------->MYB52(1)   <---------MYB46(3)      ------->TEIL------>ZmHOX2a(2)        <---------MYB52(2)       <---------TOE2(3)  --------->ALFIN1      <---------YAB1--------->GLK1(1)       <-----------GT1           --------->YAB1 --------WRKY12      <---------YAB1   <---------GLK1(1)      --------->AHL20(2)       <---------WOX13(1) --------HVH21       --------->ICU4  --------->ARR11(3)  --------->ATHB12     ---------->DOF2   gtcagtggtgaggacgagacctgatgatgaatcatctctgatctcctctctcgactgcatcatttaactaacaaagtactaaatgccgattgatgatgct  4048400                                                   <---------O2                                                   --------->O2                                                --------->ANAC58            <---------ICU4                                                ----------->HVH21           -------->ATHB1                                                --------->ANAC58           <---------ATHB51                                                --------->ANAC46           --------->AHL20(2)                                      --------->DAG2                       <---------AHL20(2)      --                           ---------->DOF2    --------->ANAC46             --------->ICU4         ---                         <---------YAB1      --------->TOE1(2)       --------->YAB1               <-- <---------ATHB12     --------->ICU4 ---------->DOF2    --------->AtLEC2--------->AHL20(2)      -----   ctaatcaacaagagaatattagtatttatgaaagatggaaaaaggaacacacgacgtcttgcaaattacaagtataaattattaagagacattgacataa  4048500             ----------->GT1         --------->ARR11(3)         <---------AHL20(1)         <---------AHL20(2)    --------->AHL20(2)                                                            <----------DOF2 --------->ICU4                 --------->ARR11(3)                             --------->ANAC58 ------->AHL20(2)               <---------ARR11(3)                             --------->ANAC58 ------>AHL20(2)   <---------ATHB51                                        --------->ANAC58       <-- -------AHL20(2)   <---------AHL20(2) --------->ARR14(2)                   --------->AtLEC2       --- ---->YAB1--------->CCA1(2)    <---------CCA1(2)          <----------DOF2  --------->ANAC58    <-----   ataatttttaatatatggaaaataatgggagacatatctatatatgcagtagggtttaggctttgaagttgtaaaccatgcaagcttttttgcatccaca  4048600                                                                 <-------MYC2           --------->TOE2(3)                                                                 ------->MYC2    --------->YAB1                                                                 <-------MYC3   <---------YAB1                                                                 ------->MYC3  <---------ARR11(3)                                                       <------------CBF        --------->ARR11(3) -----MYC3                 <---------AtLEC2     ------------>CBF<-----------RAV1(1)<---------YAB1 ---->MYC3           *TSS<-----------GT1       >>>>>>>>>>>>>>>>>LFY     --------->AtLEC2--------->YAB1 ----ALFIN1   --------->AHL20(2)        ------>ZmHOX2a(1)      ------->TEIL   --------->YAB1   ------   catgtctaaataccaaaaaattcaaatttacatgtctaactccttctatttccaatgtattgacgcatgtggccttgcaaatatcatcatccataactca  4048700                                                       <---------AtLEC2                                                      <-------TEIL                                                    ------->MYC3                                                    <-------PIF5              <----------DOF2                       <-------MYC2              <---------DAG2                        <-------PIF4             ---------->DOF2        <---------ICU4                              <-------MYC4            --------->AHL20(2)  --------->CCA1(2)                                 ------->PIF4   <----------ID1 --------->ARR11(1)                                 ------->PIF5   <------ZmHOX2a(1) --------->ARR11(3)                                 <-------MYC3 <---------ANAC55(2) <---------ARR11(3)                                 ------->MYC2 <---------------AtSPL8      -------- --->YAB1  <-----------GT1                        ------->TEIL   <---------TOE2(3)        <----------   taagatatgaaaattacttttttttttttttttcatttagtgatttagtatgcacatgcatgggattaaggaacaaaattaaagcatctaatctgttgta  4048800                                    ---------->ID1                                 --------------->AtSPL8                                <---------ANAC46                                <----------DOF2                            <---------ZAT18                         <---------ANAC46                         <---------ANAC58                         <---------ANAC58                       --------->CCA1(2)          <---------ICU4                      --------->ARR14(2)       --------->YAB1                      <---------GLK1(2)        ---------->DOF2                      --------->ARR11(1)      <---------ATHB12                        <---------At4g35610      <---------AHL20(2)<-------TEIL<-----------GT1                 <---------At4g35610 --->GT1              <---------ARR14(2)<----------DOF2    --------->ALFIN1   <-----------GT1 -RAV1(1)           ----------->ARR10------->TEIL--------->ICU4  ---------->DOF2 <----------DOF2   aaatttgtttaatctcgatgaaaagattcgtgtgctttgtacctttcaataaagatgacaagtggagcaaagctgatgtttaacttttagctcatcaatt  4048900                                                                              <---------ARR11(3)                                                                              --------->ARR11(3)                                                                            ----------->ARR10                                                                         <---------ANAC58                                                                         <---------ANAC58                                                                         <---------ANAC46                                                                      <--------P                                                                     <---------ANAC58                                             ---------->DOF2         <---------ANAC58          <-----                               ----------->GT1                       <-------GAMYB <-----------GT1  <         ------->TEIL  --------->YAB1   ----------->GT1             <---------MYB46(3)        <------ <-------TEIL      <------ZmHOX2a(1)--------->AHL20(2)             <---------AtMYB61 <---------At4g35610   gagtacatatgtatgcaaataggaatcagaagttggaaaaaaatgaaaaaaggaagaaagtattttgttttggttgcttagattttaagcagtctccttt  4049000                                 ------->TEIL                            <---------At4g35610      --------->ZAT6                            ------ ----MYB52(1)               --------->At4g35610 --------->At4g35610                 --------->ZAT2 ---------AHL20(2)    <----------DOF2           <---------At4g35610                 <---------ZAT2 ----DOF2          <-----------GT1         <----------DOF2                       ------>ZmHOX2a(2)   attttatgggttcttcttatattactttacagatgaatctattccctttcatctcactctaatatgaagaagacttgtcttgatccagcttgagaaaaaa  4049100  Previous    Next  AGI:  At3g12730.1    Description:  myb family transcription factor. similar to APL (ALTERED PHLOEM DEVELOPMENT), transcription factor [Arabidopsis thaliana] (TAIR:AT1G79430.2); similar to unnamed protein product [Vitis vinifera] (GB:CAO48914.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 4047079    to: 4048621    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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