Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  <----                            --------->CCA1(2)                                                   <----                           --------->ARR14(2)                                                   -----                           <---------ARR14(2)                                                   <----                         <---------MYB46(3)                                                  ------>ZmHOX2a(2)                        <---------ANAC46                          <------ZmHOX2a(1)        <---------ARR11(3)                      <------MYB46(1)                             ==================================HOX2a_HOX2a                      <------MYB83                  --------->ARR14(2)                   <---------YAB1                      <---------MYB46(3)            --------->GLK1(2)           --------->At4g35610                     <---------AtMYB61              <---------ARR14(2)          <---------ZAT2 <-----                     --------->ALFIN1               <-----------ARR10           --------->ZAT2 <-----                     <---------DEAR3(1)            <---------GLK1(2) --------->ATHB12    --------->ICU4 ----------RAV1(1)  <---------ABI4(1)    ---------->DOF2  --------->At4g35610   <---------At4g35610 --------MYB46(3) --------->ALFIN1    <------ZmHOX2a(2)   <---------At4g35610<---------At4g35610----- --------REM1(1)  <---------DEAR3(1)  ===================================HOX2a_HOX2a----------->HVH21   gttgttgcaaatgcctagagggggtggtggatatagagcgatctaaagactcagaatctgagctaagaggaagattggaagcagctctgacatgatcgta  2581700           <---------ANAC58           <---------ANAC46           <---------ANAC58                                  --------->MYB46(3) --------->REM1(1)                                          --------->ANAC58 -----ARR14(2)                                              --------->ANAC58 -----ARR11(1)        --------->ARR14(2)                    --------->ANAC46 ---->ARR14(2)        <---------ARR14(2)             <---------AHL20(2) -------ARR10      --------->YAB1                 ------>MYB46(1)                            -------- ----ARR14(1) --------->SPL7                      ------>MYB83------->GAMYB                --------->YAB1 ----CCA1(2)--------->LBD16    <---------YAB1   <---------MYB59                          ------->TEIL -->TEIL  --------------->AtSPL3                --------->TOE2(3)                  --------->ICU4  --   tctacatctacttccgtacaaacatattcgtttctgatagaatgtgcaaacctaatttatacaaccaagagtcaaatatttgggactgatgaatcaaaag  2581800                                         ------>ZmHOX2a(1)                                        --------->TOE1(3)                                       ------>ZmHOX2a(2)                                      <------ZmHOX2a(2)                             --------->ANAC46                                     --------->ARR14(2)                             --------->ANAC58                                     <---------ARR14(2)                  <----------DOF2                                    <------NtERF2                    <-----------GT1--------->ANAC58                                    --------->ATERF1(1)            <-----------GT1 ------->MYC3                                   <---------ATERF1(1)      --------->ANAC58       <-------MYC2                                   <---------MYB46(3)       --------->ANAC58       ------->MYC2                                  <---------DEAR3(1)     --------->ARR14(2)        <-------PIF5                                 <---------LBD16        --------->HSFC1(2)         ------->PIF5                                <---------ANAC46        --------->HSFB2a(1)        <-------MYC3                           --------->ATHB12             <---------HSFB2a(1)   --------->ANAC58    ---                           --------->ATHB51             <---------HSFC1(2)    --------->ANAC58    <-- -->DOF2                  <---------YAB1--------->TOE2(3)<---------ARR14(2) ---------->DOF2   ------- --------->GT1           --------->TOE2(3)             ----------->ARR10<---------DAG2   --------->AtLEC2   aaggaaacttgagaagagattagattacattattgggcggatccttagagtcatgggaaaattcgcaattttcgcctttcaagcacgagccatggacaaa  2581900                                                                  <----------DOF2                                                                 <---------ICU4                                                                 --------->YAB1---------->DOF2                                                      ---------->DOF2         --------->YAB1                                                    --------->ANAC58         <---------ATHB12              ------>ZmHOX2a(1)                  --------->ARR14(2)         ------>MYB46(1)          <---------ARR11(3)                 <---------LBD16    <---------ATHB12          --------->ARR14(2)             <---------SPL7    --------->GLK1(2)------>MYB83 ------>ARR11(3)                     --------->YAB1 --------->ANAC58       --------->WOX13(1) -------ARR11(3)    ---------->DOF2------->TEIL--------->LBD16--------->WOX13(1) --->DOF2 <---------ARR14(2)    <---------ATHB12 <---------ARR14(2)    <-----------GT1   gaacttgcacagtatcctacaaaaaagaaatcaaatgaatcatcgtccccagaaacgaaagaatcaatctttatcaccaatcaaagagacacaaaattga  2582000                             <---------YAB1     <---------LBD16                    <---------LBD16             <---------------ANT----------->GT1                   --------->ALFIN1  ------>MYB46(1)--------->ARR14(2)                  --------->ALFIN1   ------>MYB83   <---------ARR14(2)            --------->HSFB2a(2)   --------->ANAC55(2)       --------->LBD16     --------->ALFIN1            <---------HSFB2a(2)   <---------ANAC55(2)<---------GLK1(1)     --------->DAG2         ------->TEIL<---------ANAC46--------->MYB52(1)   <---------LBD16 ---------->DOF2   agagtttgatgaatcgagaagttgggggattacgatacctatcggacatttggggatttgtgcggagagaagaaaaaaaagggtggaagaatggagaagg  2582100                                                        --------->ZAT2                                           <---------MYB46(3)    <---------ALFIN1                              <-----------GT1          ------>MYB83                 <---------ZAT18 -                    <------------CBF     <------------CBF  <---------ATERF1(1)      --------->ZAT18 <             *TSS --------->ARR11(3)  ------------>CBF --------->AtLEC2           <---------ZAT18----       <---------DAG2      <---------------AtSPL8      ------>MYB46(1)         ---------->DOF2<------       <----------DOF2     <---------------AtSPL3 <------ZmHOX2a(1)        <---------TOE2(3)------>ZmHOX2a(1)   aagagagagctttatgtgaagaaattgaatttgtacggttttcaattgttgaggaccaagcagaccccaacgtttttgagatagagcgcgcttcctccac  2582200      --------->AtMYB61      --------->DEAR3(1)                                                             <---------YAB1      <---------ALFIN1                                                          <------MYB46(1)     --------->MYB46(3)                                                         <------MYB83   <---------ALFIN1                       <----------DOF2                     <---------WOX13(1)   --------->DEAR3(1)               ------>ZmHOX2a(1)                       --------->ATHB12   --------->AtMYB61                <----------DOF2                        <---------YAB1  --------->MYB46(3)            --------->ARR11(3)                       --------->ALFIN1 -------->ANAC46                <---------ARR11(3)                     <---------ANAC58 ---------ALFIN1                <-----------GT1<----------DOF2         <---------ANAC46        <----- ----->AtMYB61                 --------->CCA1(1)                       <---------ANAC58    <---------TOE2(3) ---ALFIN1      <----------DOF2--------->RVE1(1)                <----------DOF2 <---------MYB46(3)   ctccaccaccacctctctctttcatttactaaaatatcctttctcttttctttttggccaattttgttttatggggtgtgattggttatgtttatggaaa  2582300                          --------->HSFB2a(1)                  <---------ANAC55(2)                                                               <           --------->ANAC55(2)                                                                -------  <------ZmHOX2a(2)       <---------HSFB2a(1)                                                <------- ----GLK1(1)     <-------TEIL  <----------DOF2                                         --------->ANAC46   ttcgatcagttttatgtgatacataagaaaattctttgaagccttcttggtggaatggaatcaaacaagttttaaaacacacttgttacacaaaaaccac  2582400                                                          --------->CCA1(2)     --------->TOE2(2)                               --------->ANAC46                              <-     --------->TOE1(2)                             <---------ALFIN1                            <-----   <---------YAB1                                ----------->RAV1(1)                           ------ --------->YAB1                                 --------->MYB46(3)                         <--------- <---------ICU4         --------->ANAC58 -------->HAHB4--------->ANAC46                  ---------->ID1 ---------ATHB12        --------->ANAC58 --------->YAB1--------->ANAC58                <---------ANAC58 -->TOE2(3)             --------->ANAC46<---------YAB1 --------->ANAC58                <---------ANAC58 ---ID1          <---------ZAT6       --------->YAB1------->GAMYB                   <----------DOF2--   aaatcatcatacgattcaagtgttacacgagactactacataataatacaacaacacacgatacaagaccgtctctctctctctcactttcgtcttttat  2582500                                                                                        ------>MYB83                                                                                        ------>MYB46(1)                                                                                        --------->MYB52(1)                                                                                        -------->P                                                                                       --------->MYB55(1)                                                                                      --------->TOE2(2)                                                                                      <---------MYB59 ------TEIL               --------->YAB1                                              <---------MYB111(1) ----------AtSPL8       --------->ANAC58                       <-----------GT1        --------->TOE1(2) --------->AtSPL8       --------->ANAC58               ------>ZmHOX2a(1)       --------->ANAC58     - -DOF2               <---------ATHB12              <---------ARR14(2)          --------->ANAC58     < ----->TEIL --------->ANAC46 <-------TEIL          --------->ARR14(2)   <-----------RAV1(1)     -----   gtacataatattacaaacaacaaatcaagcatacattctctctcacacatacaaatcctccaaattcacaaactctgtggcactcaaacctaccagacaa  2582600  Previous    Next  AGI:  At3g08505.1    Description:  zinc finger (CCCH-type/C3HC4-type RING finger) family protein. similar to hypothetical protein [Vitis vinifera] (GB:CAN69574.1); similar to Os06g0318700 [Oryza sativa (japonica cultivar-group)] (GB:NP_001057505.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain Zinc finger, RING/FYVE/PHD-type (InterPro:IPR013083); contains InterPro domain Zinc finger, RING-type; (InterPro:IPR001841) Range:  from: 2580083    to: 2582113    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At3g08510.1    Description:  ATPLC2 (PHOSPHOLIPASE C 2); phospholipase C. similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT5G58700.1); similar to phosphoinositide-specific phospholipase C family protein [Arabidopsis thaliana] (TAIR:AT2G40116.1); similar to phosphoinositide-specific phospholipase C, putative [Arabidopsis thaliana] (TAIR:AT3G55940.1); similar to phosphoinositide-specific phospholipase C P13 (GB:AAB03258.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN64084.1); similar to phosphoinositide-specific phospholipase C [Brassica napus] (GB:AAD26119.1); contains InterPro domain Phospholipase C, phosphat Range:  from: 2582368    to: 2585857    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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