Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                  -----                                                                                              -------                                                                                           <---------GLK1(1)                                                                                          <XXXXXXXXXX                                                                                <---------MYB52(1)                 -------->P                                                   <---------ZAT6---------             --------->ANAC58                  --------->LBD16     <---------ANAC58     --------->ANAC46             --------->ANAC46             --------->At4g35610      <---------ANAC58     --------->ANAC58             --------->ANAC58             <---------At4g35610    --------->GLK1(2)      --------->ANAC58   ctctgctatggatgcaagcaacctataagtgatgaagacatggaagctccagagtacgagtatggagtttcttgcccttactgttactccaagaaatcag  17018900                                                                                   --------->LBD16                                                                                  --------->ANAC58                                                                                  --------->ANAC46                                                                                 <---------MYB55(2)                                                                             --------->WRKY38(1)                                                                             --------->WRKY12                                                             --------->PCF5  <---------ETT(2)                                                            <---------SPL7  <------NtERF2                                                      <---------WOX13(1)  <---------DEAR3(1)     ---------->DOF2                           <---------ANAC58     ---------->DOF2------>NtERF2  <------ZmHOX2a(1)                            <---------ANAC46 --------->LBD16  --------->MYB46(3) ---->At4g35610                                <---------ANAC58<---------HSFB2a(2)--------->ANAC58 -->YAB1 ---------->DOF2                       ----------->GT1<---------LBD16--------->ETT(2) XXXXXXXXXXXMIR4221    --------->ANAC58  <------ZmHOX2a(1) <---------MYB46(3)--------->DEAR3(1) --------------->ANAC81--------->ANAC58<---------TOE2(3)  <---------AtMYB61 --------->ATERF1(1)   aagaggagaaagaaagggcaagagcaaggcagacacagtttgaggaatggggtgtaattggtggtccggacaaaggtcgtcgacccgccactaaacctga  17019000                  --------->AtLEC2                                                      --------->ANAC55(2)              <------ZmHOX2a(2)                                                       <-----------GT1             <---------ARR11(3)                                                    ----------->GT1             --------->ARR11(3)                                           --------->ATHB12    --------->ANAC58        <------MYB83                                 <---------ATHB12           -    --------->ANAC58        <------MYB46(1)               ---------->ID1 --------->ICU4 <---------ANAC55(2)    --------->ANAC46 ---------->DOF2          --------->YAB1  <<<<<<<<<TBF1     <---------AtLEC2 ----   tagtccaaggaagaagatcaatgcaaagcttggttcttcaatatagaatgatgttgttttgttcttcttcttgaaatcatttgcattgttacatacttac  17019100                                --------->ARR11(3)                                <---------ARR11(3)   --------->MYB52(1)            --------->ANAC58   --------->YAB1        <---------ARR14(2)                     <------NtERF2            --------->ANAC58  <---------ATHB12    --------->YAB1                           ------>NtERF2            --------->ANAC46  --------->ICU4   <-----------GT1               --------->MYB46(3)    ----------->GT1   <---------ATHB12    <---------AHL20(2)    --------->MYB46(3)        <---------ANAC46 --------->DOF2     --------->WOX13(1)    --------->AHL20(2)  --------->MYB52(1)     --------->MYB52(1) ----->TOE2(3)    <---------ATHB12------>ZmHOX2a(2)  --------->ARR14(2)    --------->MYB52(1)<-------GAMYB   attaaagagtttaaacgctaatcaatgaggcaatgatcttgaatttttttaagcatatcggaaacaacgactagaaacaacgactagaaacggcgcgttg  17019200                                       <---------ANAC46                                       >>>>>>>>>>>>WRKY18                                       <---------ANAC58                            <---------ZAT6                                                 <---------YAB1                            ----------->GT1                                             --------->ICU4                     <-----------RAV1(2)                      <----------DOF2    <---------At4g35610                  --------->ANAC58     <---------ANAC58    --------->ARR11(3)    --------->At4g35610          <---------ICU4<------ZmHOX2a(1)          --------->WRKY18(1)           --------->LBD16   <---------ZAT6--------->RAP2.6(3)  <---------TOE2(3)    <---------ARR11(3)  <---------LBD16 ------   ----------->GT1--------->ANAC58<------------CBF<--------ZAP1             *TSS<---------ANAC46<----   ttcaagtgttaataagtagaacggcaggaagtgtaaaattgacgtttgactaggtcaagaagctcttttaatgtcaaaaattccgcagaattgattatcg  17019300                     <---------ANAC46                     <---------ANAC58                     <---------ANAC58                  --------->ALFIN1                <-----------RAV1(1)             ------>ZmHOX2a(2)            <---------GLK1(1)            <------ZmHOX2a(2)           --------->ARR11(3)           --------->ARR14(2)           <---------ARR11(3)           <---------ARR14(2)          ==========================HOX2a_HOX2a        <---------TOE2(3)        <---------TOE1(3)                                                                         <--     <---------MYB52(1)                                                                      <------- --->YAB1 <------ZmHOX2a(1)  ========================HOX2a_HOX2a                      --------->ARR11(3) -------TGA1--------->GLK1(1)------>ZmHOX2a(2)<------ZmHOX2a(1)                   <------ZmHOX2a(1)   tcatttcgttaaggatctctgtggggtttgatcgaatttcatagcgaaggagagagtgagagagagattgaagcagtaatggcaggaacatctggattgc  17019400                                                                        ------->PIF5                                                                        --------->ATERF1(1)                                                                        <-------PIF5                                                                       --------->At4g35610                                                                       <---------DEAR4(2)                                                                       <---------DEAR3(2)                                                                       <---------ATERF1(1)                                                                      <---------DEAR3(1)                                                                      <---------MYB46(3)                                                                    <---------At4g35610                                                                    ------>NtERF2                                                                    --------->ZAT2                                                                    <---------ZAT2                                                                   --------->DEAR3(1)                                                                  <------NtERF2                                                                  --------->ATERF1(1)                                                                  --------->RAP2.3(1)                                                                  <-----------RAV1(2)                                                                  --------->ERF1                                                                 <------NtERF2                                                                 --------->At4g35610                                                                 <---------At4g35610                                                                 --------->LBD16                                                                 <---------ATERF1(1)                                                                 ------>NtERF2                                                                 --------->ABI4(1)                                                                --------->RAP2.3(2)                                                                --------->DEAR3(1)                                                                --------->RRTF1(2)                                                               --------->RRTF1(1)                                                               --------->RAP2.6(1)                                                               --------->ATERF1(1)                                            <---------At4g35610<------NtERF2                                            ------>NtERF2     ------>NtERF2                                            --------->At4g35610--------->RAP2.3(1)                                           --------->DEAR3(1) <---------ATERF1(1)                                          <------NtERF2       --------->ABI4(1)                                          --------->ATERF1(1)<---------ATERF1(2)                                          --------->RAP2.3(1)<---------DEAR3(1)                                          --------->DEAR4(2) --------->ANAC46                  <------ZmHOX2a(2)      <---------ATERF1(1) --------->RAP2.3(3)                  --------->CCA1(2)      ------>NtERF2       --------->RAP2.3(2)                 --------->ARR11(3)      <---------DREB2C(1) --------->DEAR3(1)                 --------->AGP1          <---------At4g35610 --------->ATERF1(2)         --------->ANAC58                <------NtERF2      --------->ATERF1(1)                 -----         --------->ANAC58               --------->DEAR3(1)  --------->DEAR4(2)                  <----       ---------->DOF2     <---------WOX13(1)          --------->ARR14(2)  <------NtERF2       ------       --------->ZAT14   --------->ATHB12--------->DREB2C(1)--------->ERF1------>NtERF2    --------->ANAC46  ------->GAMYB  --------->ARR14(2)     <---------DEAR3(1)  --------->RAP2.3(1)            --------->ANAC58 --------->ANAC46<---------ARR14(2)     <---------ATERF1(1) --------->ORA47(2)----------->RAV1(2) -------WRKY38(1)<---------ARR11(3)     --------->RAP2.6(2)<---------ATERF1(1)<---------ZAT2   ------ --WOX13(1)  ---------->DOF2         --------->ANAC46  <---------ARR14(2) --------->ABI4(2)--------->ANAC58   tcaacgcagtgaagccaaagatccaaacgattgatattcaggccgccgctggatggggaatcgccgccgcagccggtgccatctgggtcgtccaagtaag  17019500                                                              ------>ZmHOX2a(2)                                         <---------GLK1(2)   <---------GLK1(1)                                      --------->ANAC46       <------ZmHOX2a(2)                                      --------->ANAC58       --------->GLK1(1)                              <------MYB46(1)               <---------ARR11(3)                              <------MYB83         ------>ZmHOX2a(1)--------->ZAT6                            <---------WOX13(1)     ==================HOX2a_HOX2a                    ------>NtERF2     --------->ANAC58 ------>ZmHOX2a(2)                   --------->ANAC46   --------->ANAC55(2)   --------->ARR11(3)       ------>ZmHOX2a(2)  --------->ATHB12       ----------------->AGL1 ---->At4g35610    ------>NtERF2    <-----------GT1=================HOX2a_HOX2a           ----------- -----At4g35610    --------->LBD16 <---------REM1(2) --------->ARR14(2)                 <---------ANAC46 --->ANAC58       <---------RAP2.6(2)<---------LBD16 <---------ARR14(2)            <---------YAB1 --->ANAC58      <---------LBD16<<<<<<<<<MYB2    <-----------------AGL1      <---------TOE2(3)    <--   ctatctcgatctcttgttttccggccatagattggttttcacggattatggtcctgatctgggatctctatctctagctaatgttatgtttctggtgaaa  17019600                                                                                                   --                                                                                                   ==                                    <---------WOX13(1)                ------>ZmHOX2a(2)            <-                                  --------->ATHB51              <----------DOF2               <------                                  --------->ATHB12             <---------ANAC58              --------                                  <---------ICU4               <---------ANAC58              <-------            ----------->GT1      <---------YAB1            <---------ANAC58                 ---------     <----------DOF2             --------->ICU4            <---------ANAC58              <---------TOE2(3) >GT1<---------DAG2            --------->YAB1            <-----------GT1               ---------->DOF2 ---------RAV1(1)     ----------->GT1                    <---------AHL20(2)   <---------GLK1(2)    <-   ttgttggctttatctggttgaaagatgaaaatttcataattgatcaccatttatcaaatttacttgctttgatctcattagattatctataaaggtggtt  17019700                          --------->ANAC55(2)                          <---------ANAC55(2)                          <---------ANAC58                          <---------ANAC58 ------------->AGL15      <---------ANAC55(1)                                       <---------ARR14(2) ===================================================================================MADS_MADS    <--- --------------AGL15    <-----------GT1                                             <-----------ARR10 -GAMYB              <---------ICU4        --------->ATHB12                         --------->ARR11(3) --->GT1            <---------YAB1 ---------->DOF2                                  --------->ARR14(2) --MYB46(3)         --------->AHL20(2)  <---------ANAC58                            <---------ARR11(3) >ALFIN1            <---------AHL20(2)  <---------ANAC58            <---------------AGL15        <--- ---------DOF2  <---------ANAC46 <---------YAB1     <---------AtMYB61              <---------CCA1(2)   acttttatgagcatcgttgcatataattacgtttcatgaaaggcttgattcgttttggtgctagtctattcttgaattggtgatcaaatcttcttcattt  17019800  Previous    Next  AGI:  At2g40760.1    Description:  rhodanese-like domain-containing protein. similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G09280.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN82942.1); contains InterPro domain Rhodanese-like (InterPro:IPR001763) Range:  from: 17017126    to: 17019145    Orientation: Forward Links:  TAIR  MIPS    AGI:  At2g40765.1    Description:  unknown protein Range:  from: 17019276    to: 17020403    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
	printer-friendly version