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Chromosome 1
Chromosome 2
Chromosome 3
Chromosome 4
Chromosome 5
Position
Exon region
Intron region
UTR region
AGI
% Restriction to highly conserved TF binding sites (0-100)
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1 10 20 30 40 50 60 70 80 90 100
<-
--
<-
<-
-------
<------
<---------
HSFB2a(2)
------>
MYB46(1)
--------->
HSFB2a(2)
--------->
ARR11(3)
--------
<-------
TEIL
<---------
ARR14(2)
------>
MYB83
<---------
TOE2(2)
--------->
GLK1(2)
--------->
ICU4
--
<---------
TOE2(3)
--------->
ARR14(2)
<----------
DOF2
--------->
GLK1(1)
<---------
TOE1(2)
<---------
HSFB2a(2)
<---------
ANAC58
<---------
YAB1
<--
----
CCA1(2)
--------->
HSFB2a(2)
<---------
ANAC58
--------->
YAB1
<--
tcttaggttcttacagaaaactcttaactacatgcttcttaggtcgagaatatgttatcttgtcgagtgctttctcaaatgcaattacgatttccaacca
16988900
--------
ARR14(2)
------->
ARR11(3)
--------
ARR11(3)
<---------
AHL20(2)
----------
ARR10
--------->
AHL20(2)
-->
MYB46(3)
------->
GAMYB
<---------
AHL20(2)
<--
---
ATHB12
--------->
MYB46(3)
--------->
ANAC58
<--------
>
P
--------->
ANAC46
--------->
LBD16
--------->
ANAC58
---------->
ID1
------->
ARR14(2)
--------->
ANAC46
--------->
ANAC55(2)
<----------
DOF2
--
-------
CCA1(2)
<---------
LBD16
<---------
HSFB2a(2)
--------->
TOE2(3)
---
-------
GLK1(2)
<----------
DOF2
<---------
MYB52(1)
--------->
ICU4
<---------
GLK1(2)
-----------
gtatctcgacacaaccatctttttctccgcagttttatcaacagttagcattccataagtaattttttggcttcatattcttaattctttttccctttac
16989000
<---------
ZAT18
-------
At4g35610
--
DOF2
------->
AGP1
--------->
YAB1
----------->
RAV1(1)
------>
At4g35610
<-----------
RAV1(1)
---->
AGL15
--------->
ARR11(3)
<----------
DOF2
--------->
AtMYB61
agct
ctagtgccatttatcttgatatatcgaagtctttgttggccacattgaagaaaacgtttcgaccatcaaacaagttccatgaggcttctcaaatag
16989100
--------->
DAG2
------>
ZmHOX2a(2)
---------->
DOF2
<------
ZmHOX2a(2)
<------
ZmHOX2a(2)
<---------
ARR14(2)
------>
ZmHOX2a(1)
--------->
ARR14(2)
----------->
RAV1(2)
<---------
ARR11(3)
==============
HOX2a_HOX2a
--------->
ARR11(3)
--------->
ANAC46
<---------
HSFB2a(2)
----------->
ARR10
------
--------->
ANAC58
--------->
HSFB2a(2)
---------->
DOF2
<-------
GAMYB
<---------
At4g35610
------>
ZmHOX2a(1)
<------
NtERF2
=============
--------->
At4g35610
<---------
ALFIN1
------>
NtERF2
<-----------
RAV1(1)
<---------
ZAT2
<---------
At4g35610
--------->
ETT(2)
<------------
AtMYB77
--------->
ZAT2
--------->
At4g35610
<---------
ETT(2)
------->
TEIL
--------->
MYB46(3)
<xxxxxxxxxxxxxxxx
smallRNA(i)
---------->
ARF1
--------->
TOE2(3)
<---------
AtMYB61
-------->
P
--------->
ANAC58
--------->
LBD16
<-----------
HVH21
------>
ZmHOX2a(1)
<---------
MYB46(3)
cctccatactctaaccagctcatacacacaatcagctcctcctggatcaaaaggtcccttgtcgccagtaaagatcctaaacccatgtaactgtggttgc
16989200
<---------
REM1(2)
<---------
ZAT14
--------->
ZAT14
<---------
ZAT18
--------->
ZAT18
<---------
LBD16
<---------
ANAC58
----------->
RAV1(2)
<---------
ANAC58
------->
GAMYB
<-----------------
AGL1
--------->
MYB46(3)
<-----------
GT1
--------->
ZAT14
-------->
P
<----------
DOF2
--------->
ETT(2)
------
--->
ZAT18
------>
ZmHOX2a(1)
<----------
DOF2
<---------
ZAT14
<-----
===================
RAV
<-----------
GT1
<---------
ETT(2)
<<<<<<<<<
TBF1
<--------
actaaccatctcctgcttctccttttaccctttcgcgcactgtctacactgttcatcttcttcttctctgcatcatagacagcccttctccatattacct
16989300
--------->
TOE2(3)
<---------
ATHB12
--------->
ANAC46
<---------
MYB46(2)
--------->
ANAC58
--------->
YAB1
--------->
ANAC58
<---------
YAB1
--------->
ANAC55(2)
--------->
ANAC58
<--
<---------
ARR11(3)
------>
MYB46(1)
<---------
ALFIN1
---
--------->
ARR11(3)
------>
MYB83
--------------->
AtSPL8
<--
--------------->
AGL15
------>
ZmHOX2a(1)
<---------
MYB59
--------------->
AtSPL3
<--
--->
TOE2(3)
---------->
ID1
<---------
ATHB12
<---------------
AtSPL8
<----------
DOF2
----
MYB59
<---------
HSFC1(2)
------------>
CBF
<---------
ANAC55(1)
--------->
ANAC58
------
---
GT1
--------->
HSFC1(2)
*
TSS
--------->
YAB1
<---------
ANAC55(2)
---------->
DOF2
--------
tactcacccctaagagaaccat
cttgtcctcaagg
tctcaacaatgataccaaacattaagtgttgatgtacaccccaaaagccaacttccttttaaaag
16989400
<----------
ID1
---------->
DOF2
-------
ANAC58
-------->
GT1
<-----
-------
ANAC58
--------->
YAB1
--------->
YAB1
-------
ANAC46
<---------
ATHB12
<------
ZmHOX2a(1)
--->
DAG2
------------>
CBF
<---------
HSFB2a(2)
-->
DOF2
---------->
DOF2
---------->
DOF2
--------->
HSFB2a(2)
--
gcgtaaaagacaaagcttcaatgatatatagtcaggctctgtttcaaaagttcaaaggctcaatactattttgttaacatgtctaggaatcacaaaatgc
16989500
<---------
ZAT18
---------->
DOF2
--------->
YAB1
--------->
YAB1
--
TEIL
<---------
TOE2(3)
<---------
ATHB12
--------->
ZAT14
--------->
ZAT18
------->
YAB1
--------->
WOX13(1)
--------->
MYB46(3)
--------->
ANAC46
atcataactaagataaagagtgagcatcaaaaacaatttcaatcaaatcccatcacaaaattgaccactgaagaatcaaaaacagaggccacttagtcaa
16989600
--------->
ANAC58
--------->
ANAC58
<----------
DOF2
--------->
ANAC46
--------->
At4g35610
------>
ZmHOX2a(1)
<---------
ALFIN1
---------->
ID1
---------->
DOF2
<---------
ALFIN1
------>
ZmHOX2a(1)
------->
GAMYB
------->
TEIL
<---------
At4g35610
<---------
ANAC58
<---------
YAB1
--------->
ARR14(2)
--------->
TOE2(3)
--------->
MYB46(3)
<---------
ANAC46
<---------
ARR14(2)
--------->
ZAT6
<---------
ANAC58
<<<<<<<<<<<<<<<<<
LFY
---
aaaaactctgaaactccataaacgaatcccactcttcagctttcactatcctttgttccttacacaaccaaaaagacattacaatggtgtttattagaag
16989700
--------->
ARR14(2)
<---------
ARR11(3)
--------->
ANAC46
------>
ZmHOX2a(1)
--------->
At4g35610
<---------
HSFB2a(2)
<-----
--------->
HSFB2a(2)
--------->
At4g35610
XXXXXXXXXXXXXXXXXXXX>
MIR2111A*
<---------
ATHB12
------>
ZmHOX2a(1)
--------->
ARR11(3)
--------->
ANAC58
<---------
ANAC46
--------->
TOE1(1)
<---------
At4g35610
--------->
ANAC58
--------------->
AtSPL3
--------->
TOE2(1)
--------->
CCA1(2)
------->
DOF2
--------->
AtLEC2
<---------------
AtSPL8
------>
ZmHOX2a(1)
<---------
ARR14(2)
taaagtttcaaaatccatggaagccattgattctatagaggtaccttgtaatactcctcgagtcctcgtcctcgaaatgaagatttgagcagatgggctt
16989800
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AGI:
At2g40711.1
Description:
unknown protein
Range:
from: 16988769
to: 16989335
Orientation: Reverse
Links:
TAIR
MIPS
Please cite the corresponding
publications
when using AthaMap.
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