Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                                   ----                          ----------->GT1                                     <---------ICU4    -----                          <---------ANAC55(2)                       <---------YAB1            ------>MYB83                         <---------TOE2(3)             ----------->GT1       --------->ICU4   ------>MYB46(1)                     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)    --------->AHL20(2)          >>>>>>>>>MYB2                  ----------->GT1                ---------->DOF2   <---------TOE2(3)    <xxxxxxxxxxxx               <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(se3)  --------->CCA1(2)     xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(se3)              <---------ARR14(2)           ----------->GT1   --------->AHL20(2)     --------->HSFB2a(2) ----DAG2     --------->MYB52(1)        --------->MYB52(1)   <---------AHL20(2)     <---------HSFB2a(2) -----DOF2   <---------SPL7--------->TOE2(3)  --------->AHL20(2) <---------AHL20(2)<---------ETT(2)--   ttttgatatagaagccgaacgggtgataacgtaaaacaaacaaaacgattaaaaagatagaaaataaataatgttagaaataatgtcgagaaaaccaaac  14829500                                 <---------RVE1(1)                                 <---------CCA1(1)                                <---------ARR11(3)         --------->LBD16        --------->ARR11(3)         ----------->GT1       --------->YAB1             --------->AHL20(2)       <---------LBD16        <---------YAB1             --------->AHL20(2)            --------->ANAC58   <---------AHL20(2)    --------->ARR11(3)              --------->YAB1                --------->ANAC58  --------->AHL20(2) ---------->DOF2                  --------->YAB1--------->ICU4  <------ZmHOX2a(2) ----->TOE2(3)   <---------ARR11(3)                  <---------AHL20(2)            <---------ARR11(3) ---->YAB1       --------->ARR11(3)                 <---------AHL20(2)   ---------->DOF2  ----------- xxxxxxxxxsmallRNA(se3)  <---------ARR11(3)         --------->AHL20(2)--------->TOE2(3)--------->AtLEC2 ------->AHL20(2)--------->GLK1(2)       ---------->DOF2<---------------AGL15      --------->ARR11(3)   ataaattaatccggagaaaaatctaaagatttatgatattttcaaaagttgttttttaataaaaatagtattcattaaaaccctagatcatgcaacattg  14829600                                              --------->AHL20(2)                                              --------->ATHB51                                             --------->ICU4                                           <---------ICU4                                          --------->ICU4                                          <---------YAB1                                          <------ZmHOX2a(2)                                         <---------ARR11(3)                                         --------->ARR11(3)        ---------->DOF2                                        <---------GLK1(1)     ---------->DOF2                                     --------->LBD16     --------------->AGL15                                    --------->HSFB2a(2)  <---------------AGL15            --------->ARR11(3)                                    <---------HSFB2a(2)<---------HSFB2a(1)                --------->AHL20(1)                                   <---------LBD16     <---------HSFC1(2)                 <---------ARR11(3)                                 <---------YAB1        --------->HSFB2a(1)                <---------AHL20(1)                              <---------YAB1 <---------YAB1 <---------HSFB2a(2) <---------RVE1(1)                          ------>ZmHOX2a(1)xxxxxxxxxxxxxxxxxxxxxx>smallRNA(i2) <---------GLK1(2)                          =======================HOX2a_HOX2a--------->HSFB2a(2)<---------ARR11(3) >RAV1(1)      <----------DOF2<---------AHL20(2)       --------->HSFC1(2)      --------->ARR11(3)  <-   aatcacatatacttaaacttttgttttcctatattattctggagatcattatttagaaacttctaaaagaaaagaatagaagatttttagaatattttca  14829700                                                                     --------->AHL20(1)                                                        <---------AHL20(1)                                      ------>MYB46(1)   --------->AHL20(1)                            --------->AHL20(2)          --------->ARR11(3)                            <---------AHL20(2)        <---------AHL20(2)                        <----                      --------->ANAC55(2)             <---------AHL20(1)                       <-----                <---------AHL20(1)    ------>MYB83   --------->YAB1  <---------AHL20(1)        <-----                --------->AHL20(1)    <---------CCA1(2) <---------ICU4<---------YAB1           ------     <----------DOF2  <---------ANAC55(2)         --------->YAB1     <---------AHL20(2)        ------     <---------DAG2 <-----------GT1 <---------MYB111(1) <---------ARR11(3)                     ------  <-----------GT1<---------ICU4     <---------MYB59 <---------YAB1  --------->AHL20(2)    --------->YAB1 --------ICU4--------->AHL20(2)   -------->P     <XXXXXXXXXXXXXXXXXXXXMIR400             <-------TEIL   aatattacttttccaaaaaatattacttaataaaactaccaaatctctagatttataatattttcaaagattatatttccaaaaaaaaacattcatagat  14829800                                                                      --------->AHL20(2)                                                   --------->TOE1(3) --------->AHL20(2)                                        <------ZmHOX2a(2)      <---------YAB1                                        --------->CCA1(2)      ------------>CBF                                       --------->AGP1         --------->TOE2(3)     ---------->DOF2                   --------->ARR14(2)    --------->YAB1           ------->TEIL --ZmHOX2a(2)                          <---------ARR11(3)    <---------ICU4   --------->YAB1 ----ARR11(3)                          --------->ARR11(3)   <---------YAB1    <---------ICU4 ----ARR14(2)                          <---------ARR14(2) <---------ICU4  <---------AHL20(2) --->ARR11(3)                         --------->GLK1(1)   --------->YAB1  --------->AHL20(2)   <----- --->ARR14(2)                         <---------GLK1(1)  <---------ATHB12--------->AHL20(2)   ------- --->AGP1 <----------DOF2        ---------->DOF2   --------->TOE2(3) <---------AHL20(2)  ----------->GT1   ccactaaaaaagctttgatcaacaaaaaaaaaaaaaaaagagatccactaaaaccctaaatcatcatcaatataaattaatcttgatgaacttgtataaa  14829900   <------------CBF   *TSS                             <---------ANAC58 <------ZmHOX2a(1)                  <---------ANAC58                                        <-------- ----AHL20(2)                      <-------TEIL            <---------ICU4<---------ANAC46  --------->AHL20(2) -->AHL20(2)                 ---------->DOF2<------ZmHOX2a(1)   <---------ANAC55(2)       <---------YAB1   ataggaattgaagaagttatagagccagagccaaagatgcatgctaggactctgttcataagaattatgtgagtgacttatttgactgagttattaaaaa  14830000                                     --------->ATHB12                                <---------YAB1                               <---------AHL20(2)                               --------->AHL20(2)                              <---------AHL20(2)                              --------->YAB1                              --------->AHL20(2)                          --------->AHL20(2)                         <---------AHL20(2)         ---------->DOF2 --------->AHL20(2)    --------->TOE2(3) <---------GLK1(2)<---------WOX13(1)   <------ZmHOX2a(1) <---------------AGL15 < -AHL20(2) ----------->GT1<---------AHL20(2)             <---------AtLEC2 <-----------GT1   ------>NtERF2   ttgaatccttgaaaagagaaaacagaatttaattaaaattgattgtttagttttgttttgcaggacaatgccaaattaacccaatttgagtaggcgactc  14830100              ------>NtERF2                --------->ZAT6             --------->LBD16            --------->YAB1             ------>NtERF2              <---------ICU4            --------->DEAR3(1)         --------->ICU4           <---------LBD16         ------>NtERF2          <---------ATERF1(1)     --------->ANAC46                            ------->TEIL     <-----------------AGL1      <---------LBD16                             <-----------GT1 <---------ARR11(3)           --------->At4g35610                     <---------ARR11(3) <-----------ARR10            <---------At4g35610                ----------->GT1 --------->ARR11(3)       <-----------HVH21<-----------GT1      <---------HSFB2a(2) <---------ARR14(2)       <-----------TGA1<---------YAB1        --------->HSFB2a(2) --------->ARR14(2)      --------->bZIP60(2)           --------->TOE2(3)  --------------->AtSPL8 ---------CCA1(2)  <---------ATHB12--------->LBD16  ------>ZmHOX2a(1) --------->ARR11(3)   acatatctcccgctccggccaatcgactcgtcatctccgccattatcactactccttccttcatttctggtaaatctttgtacccttcttctctattctt  14830200                           --------->ANAC58                    --------->REM1(2)                 <---------ANAC55(1)                                <-----------GT1              ----                 <---------ANAC58        <---------YAB1           <---------WOX13(1)            <----                 <---------ANAC46    ------>ZmHOX2a(2)          --------->ATHB12       <---------ICU4                --------->MYB52(2) --------->ARR11(3)       --------->ATHB12  ---------->DOF2   -----    <---------AHL20(2)     --------->ANAC58--------->WOX13(1) <---------WOX13(1)   ----------->GT1  <----------DOF2<---------ANAC58  <---------ARR11(3) <---------CCA1(2)   --------->YAB1     --------   cattcttttattttttgttacttgtagactcgaaattgatcttatcaatcgcttccatctctcgattgattaacaattttaaaagttgataatttcgaga  14830300             --------->LBD16            --------->HSFC1(1)                                <---------GLK1(2)            <---------HSFB2a(2)           <-------TEIL      --------->ICU4            --------->HSFB2a(2)       <---------YAB1    --------->ZAT18           <---------LBD16     --------->GLK1(1)       <---------ANAC55(2) ----->CCA1(2)               <------ZmHOX2a(1)         <---------ANAC58 -----ARR14(2)             <---------TOE2(3)           <---------ANAC58 ---->ARR14(2)             <---------TOE1(3)           --------->ANAC55(2) ->HSFB2a(2)<---------HSFC1(1) <---------GLK1(1)      <---------------AtSPL3               --------->YAB1   tttggagtctgtttctggaaaatgtggataaggatttcttatgattcatggattaatgcgtactgattcgttcacatgttactcaaaactgtatcatggg  14830400  Previous    Next  AGI:  At2g35160.1    Description:  SUVH5 (SU(VAR)3-9 HOMOLOG 5). Identical to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH5 (SUVH5) [Arabidopsis Thaliana] (GB:O82175); similar to SUVH6 (SU(VAR)3-9 HOMOLOG 6) [Arabidopsis thaliana] (TAIR:AT2G22740.2); similar to SUVH6 (SU(VAR)3-9 HOMOLOG 6) [Arabidopsis thaliana] (TAIR:AT2G22740.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN76871.1); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain SRA-YDG (InterPro:IPR003105); contains InterPro domain Post-SET zinc-binding region; (InterPro:IPR003616); contains InterPro domain Pre-SET zinc-binding sub-group; (I Range:  from: 14829903    to: 14833241    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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