Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                                    --------->ARR11(3)                                                                   <-----------HVH21                                                                   <-----------TGA1                                                                  --------->ETT(2)<---------ARR11(3)                                           --------->ZAT18        --------->bZIP60(1)        ---------->DOF2    <----------DOF2 <---------ZAT18 -------->P       -------->P          ----- ----ANAC58    <-------GAMYB       <---------At4g35610  <---------MYB52(2)--------->MYB46(3)    <---- ----ANAC58   <---------MYB46(3)   --------->At4g35610--------->ZAT6    --------->AGP1    <---------ALFIN1   tctcagagcctaaagatggttgcacttctctttctctagctgaagtccacatactatcactaaccttgtcgtcagaactaccaagataatcccctctccc  7146000           --------->HSFB2a(2)                               <---------ANAC55(1)           <---------HSFB2a(2)                               <---------ANAC46                      <-         -------->P                                          <---------ANAC58   --------->ATHB12   <-  --------->ARR14(2)                --------->ARR14(2)       <---------ANAC58  <-------TEIL     =====  <---------ARR14(2)                <---------ARR14(2)      <-----------------------TaNAC69(2)  ----- ---->HSFB2a(2)         <---------At4g35610             ----------->GT1    <---------ATHB12 <-------- -----HSFB2a(2)         --------->At4g35610             --------->MYB111(1)<---------YAB1   ---------   agtagaacctctaccagaataacttctgcttaactcacgatttgcacttgtatttgagtagttacttgtgccagtccatgattcattggaactaaatcct  7146100                  <---------GLK1(1)                  --------->GLK1(1)                                                            ------                 --------->ARR11(3)                                                        --------->TOE2(3)           --------->CCA1(2)                                                              --------->YAB1          <---------ARR11(3)                                                             <---------ATHB12        ----------->ARR10                                                               ------>MYB83    <---------LBD16                                                                   <---------MYB46(2)   <---------ANAC58       ------>ZmHOX2a(1)                <---------MYB52(1)         --------->AtMYB61   <---------ANAC46==============HOX2a_HOX2a            <-----------RAV1(2)           <---------MYB55(2)   <---------ANAC58------>ZmHOX2a(2)                   <------NtERF2                  --------->MYB46(3) ---------DOF2   <---------ARR11(3)                 ------>NtERF2                     <---------MYB111(1) --------DAG2    <---------AGP1                     <------NtERF2                     <---------MYB111(2) =========================HOX2a_HOX2a              --------->DEAR3(1)                --------->ANAC46 ->ZmHOX2a(1)   <---------CCA1(2)                <---------LBD16                  --------->MYB46(3) -ARR14(2)<---------ARR14(2)                  <----------DOF2       <---------HSFB2a(2) ------>MYB46(1) >ARR14(2)--------->ARR11(3)       ---------->DOF2<---------RAP2.6(2)         <---------AHL20(2)   ccttttcgtggagatattggatctcttcctcttctgttaaagctactgcttcgcggcctcagttgtttctctagatgtattaaaaccaccaaacatcaaa  7146200                         --------->CCA1(2)                                                          <                ------>MYB83                                                                <--------                ------>MYB46(1)                                                            <---------              <---------MYB59                                                             <----------              <---------MYB46(2)                              --------->DAG2             ---------->ID1             --------->ANAC46                                ---------->DOF2         <---------------   ----------->GT1  ---------->DOF2                      <---------MYB52(2)         --------->TOE2(3) ---->DOF2 <-----------GT1                       --------->MYB52(2)     --------->YAB1   <-----------GT1   agaattagaaaatataccaaacaaaagataaacaaacttcaagttttagtttagttgcaactaaaaagttgaaatcatagaagaaacctttttccttttc  7146300                                                                                       --------->ARR14(2)                                                                                       <---------ARR14(2)                                                                                       <---------MYB52(1)                                                                                     <---------ANAC58                                                                                     <---------ANAC58                                                                                   ------>NtERF2                                   <-------TEIL                                   --------->DEAR3(1)                                   <-----------------AGL2                        --------->ATERF1(1)                                   ----------------->AGL3                       <---------At4g35610                                   ------>ZmHOX2a(2)                          <---------ZAT14     ---                                  <------ZmHOX2a(2)         --------->HSFB2a(2) --------->At4g35610 ----------DOF2                   <-----------------AGL1    --------->HSFC1(1)--------->ZAT18-------- --DOF2      <---------At4g35610 --------->ARR14(2)         <---------HSFB2a(2) <---------ATERF1(1) ---------------ANAC81           <---------ARR14(2)        <---------LBD16 ----------->RAV1(2)    <-- --------------ANAC81      --------->GLK1(2)           ------->TEIL        <---------ANAC58 <-------- ---------ANAC81       <-----------GT1        <------ZmHOX2a(2)            <---------ANAC58------>ZmHOX2a(1)   ttctttttcatcttcatcttccgattcacaatctggatccattttgggatcagcatgtatttctggaatttcttctagcctgcgctgccgttcctctgga  7146400              <---------GLK1(2)          --------->YAB1              <---------ARR14(2)       --------->ANAC58   <-----------GT1                 <---------ANAC46<------ZmHOX2a(1)  <-----------GT1                 <------NtERF2  <---------TOE1(3) ------>ARR11(3)         <---------GLK1(2)       <---------TOE2(3) ->HSFB2a(2)  --------->ARR14(2)  --------->At4g35610       ----------->GT1                         - -------ARR11(3)      <---------ALFIN1 --------->ANAC58--------->MYB52(1)  ----------->GT1     ------ -LBD16--------->At4g35610    --------->ANAC46   --------->ANAC55(2) ---------->DOF2    <----------DOF2   gattttaacagttgcagtttctcaacacattctcgcagcgtaagcatagttaaggaataacgaagtgaataaaaagaaggaaactatatgctttctgcca  7146500                                                                               <---------YAB1                                                                              <---------AHL20(1)                                                                             <---------ICU4                                                                            --------->ICU4                                                                          --------->YAB1                                                                          <---------ICU4        -----                                                                         <---------ATHB12       =====                                                                       --------->GLK1(1)  <---------ARR11(3)         ------------>CBF                                   ---------->DOF2 <---------YAB1--------->ARR11(3) ---------->TBP   <----------DOF2                 <------ZmHOX2a(1)    <---------GLK1(1)--------->ANAC58 --->ZAT6<-------TEIL <---------LBD16  --------->AtLEC2--------->GLK1(1) --------->ICU4 --------->ANAC58   ctacaaatagattcaatgctctttccctgaagtacaaaaacatgcacagagaggagcatttccaaagcatgggaaatcattatttttgacaagaacttga  7146600                            <---------RAP2.3(2)                           <---------At4g35610                           --------->At4g35610                                       --------->ANAC58                           <---------LBD16                                          <---------HSFB2a(2)                          <-----------RAV1(1)                                       --------->HSFB2a(2)                     <----------DOF2                                           <---------At4g35610                     ========================bZIP_DOF                          --------->At4g35610                  --------->GLK1(2)                                        ------>ZmHOX2a(2)                 --------->KAN4(2)                                        <------ZmHOX2a(2)                --------->KAN4(1)                   --------->ANAC55(2)   --------->GLK1(1)                --------->GLK1(1)                   --------->ANAC55(1)   <---------GLK1(1)                <---------GLK1(1)                   <---------ANAC55(2)  <---------ARR14(2)                <----------TaMYB80                  --------->ANAC58     --------->ARR14(2)                <---------KAN4(1)                   --------->AtLEC2     <-----------ARR10               --------->ARR11(3)                   --------->ANAC58     --------->ARR11(3)               --------->ARR14(2)   <-----------HVH21                    <---------ARR11(3)               <---------ARR14(2)  --------->bZIP60(2)                  <------ZmHOX2a(1)               <---------ARR11(3)  --------->TGA1a  --------->ANAC46  <---------TOE2(2)         <----              <------ZmHOX2a(1)    --------->O2  ==============================HOX2a_HOX2a ------->GAMYB            <---------TOE1(3) ------>NtERF2      <------ZmHOX2a(2)    <---------TOE1(2)  --------->At4g35610 ----->DOF2 <---------TOE2(3)------>NtERF2      <-----------HVH21   --------->TOE1(2)--------->ANAC46 ============================================bZIP_DOF               --------->TOE2(2)--------->ANAC58   aagtttcaacagataaggatattcttttctgcggcccatgtcactagcacgatcacgcaaatgactgaaacgtaggatctctgcttccagcaactgcatt  7146700                                                                                            ---------                                                                                            ---------                                                                    --------->ATHB12  <---------TOE2(3)                                     <---------AHL20(2)            <---------YAB1 --------->YAB1                                <-------TEIL                     --------->YAB1--------------->AGL15   --------->ANAC55(2)  <---------At4g35610          --------->TOE2(3)    <----------DOF2  ---------- ---TEIL                --------->At4g35610   <-----------GT1   <---------YAB1 <---------------AGL15   catttaagtaataacttcagtactgaagcagacatacattttttttttatacatttcttaaatactatcatgatagctttgcaatattaagaaacctgag  7146800                                                                                              <------                                                                                              -------                                                                                       --------->At4g35610                                                                                   --------->ZAT2                  ----------->GT1                                           <---------HSFB2a(2)       <---------MYB59                 --------->KAN4(2)             <---------ANAC58 --------->ANAC58       --------->TOE2(3)             ------->TEIL                    <---------ANAC58 --------->ANAC58 >TOE1(2)------>MYB83             --------->AtLEC2           <---------MYB52(1)   --------->ANAC58 >TOE2(2)------>MYB46(1)     --------->YAB1                ----------->GT1  --------->HSFB2a(2) <---- ->RAV1(2)       ----------->GT1--------->YAB1    ----------->GT1 <-----------GT1 --------->ANAC58   aacccaaaacctaatagagacgataaaactagaatcatgcacattccctagacagataatacagttattttccgtctcccagaccagcaagctcaattac  7146900  Previous    Next  AGI:  At2g16470.1    Description:  zinc finger (CCCH-type) family protein / GYF domain-containing protein. similar to zinc finger (CCCH-type) family protein [Arabidopsis thaliana] (TAIR:AT3G51120.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO47242.1); contains InterPro domain Zinc finger, CCCH-type; (InterPro:IPR000571); contains InterPro domain GYF (InterPro:IPR003169) Range:  from: 7144026    to: 7146447    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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