Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                              ------->MYC2                            ------->PIF5                            <-------MYC2                            <-------MYC4                            <-------MYC3                            ------->MYC3                            <-------PIF5                            ------->MYC4                           <<<<<<<<<<AtMYC2                           <<<<<<<<<<HY5                                              <---------AHL20(2)                           <---------TGA1a                                        <---------RVE1(1)                           --------->bZIP60(2)                                   --------->ARR11(3)                           --------->O2                                          <---------AHL20(1)                           <--------ABF1                                         <---------ARR11(3)                           <<<<<<<<<<ABI5                                 <---------AHL20(2)                           ======================================bZIP_DOF--------->AHL20(2)                           --------->TGA1a                          <----------DOF2   <---------ICU4                           <---------ANAC55(2)                      <---------DAG2<---------CCA1(1)                           --------->ANAC55(2)                      --------------->AGL15               --------->YAB1       --------->GLK1(2)         --------------->AtSPL3 --------->ICU4              ----------->GT1     --------->ICU4              --------------->AtSPL8 --------->AHL20(2)             <---------WOX13(1) --------->YAB1              <-----------GT1--------->YAB1  <---------YAB1       --------->TOE2(3)   <---------O2                <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(si3)     --------->ARR11(3)   <<<<<<<<<<<<AtMYC2           <xxxxxxxxxxxxxxxxxxxxxxxsmallRNA(le3)      <--     --------->GLK1(2)   <---------ALFIN1             <----------DOF2 --------->AHL20(2) <-----------GT1     <---------ARR11(3)<-----------HVH21        ----------->GT1 xxxxxxxxxxxxxxxxxxxxxxx>smallRNA(si3)   atgtcaaaatcttagattgataaactgccacgtgtcataatctggtgagttagtaacttttgaaaccgtactttatataataagatatttattacgctta  2256600                                                                                      --------->ARR14(2)                                                                                      <---------ARR14(2)                                                                                      ------->TEIL                                                                                   <---------ANAC46                                                                                   <---------ANAC55(2)                                                                            ------>ZmHOX2a(2)                                                                           <---------GLK1(1)                        <---------YAB1                 ------->TEIL        <------ZmHOX2a(2)                   <---------ZAT6                     <---------ANAC58    <---------ARR11(3)              <------MYB83                     <---------At4g35610<---------TOE2(3)--------->ANAC55(2)              <------MYB46(1)               <---------At4g35610<---------YAB1<---------LBD16             --------->MYB46(2)           <---------ANAC46   =====================HOX2a_HOX2a             --------->MYB59             <---------At4g35610 ======================HOX2a_HOX2a             --------->MYB111(2)     <-----------RAV1(1)     ------>ZmHOX2a(1)<---------LBD16           <---------MYB52(1)       <---------TOE2(3) <---------ANAC58    <---------AGP1 ---------GT1--------->MYB111(1)  <---------AHL20(2)  <---------AtLEC2    --------->ARR11(3)       <-   ttaccatatttcagtttggtagtcttattatgcaaatttatgttgctgatgctgatgcatgtcctattaatgtatagatctcgggacgtatttgaagatg  2256700                                                     <------ZmHOX2a(2)                <---------ZAT6                                                    --------->ARR11(3)   <---------AtMYB61               ------------>CBF                 ---------->DOF2          --------->ALFIN1           ------>ZmHOX2a(2)            <---------YAB1     --------->MYB52(1)       ----------->GT1      <---------WOX13(1)              <---------ANAC58     --------->CCA1(2)      <---------ZAT14     <------------CBF                 <---------ANAC58  --------->ANAC58--------->ZAT14    --------->ICU4  <---------WOX13(1)                  <---------ANAC46  --------->ANAC58<---------ZAT14    <--------- --------ZAT6  <---------ATHB12      <------NtERF2  <---------ARR11(3) --------->ALFIN1<---------ZAT14   agtgatagattgatcgaatcaattccattttttcaaggtggcatgaatgaaaaagatcaagaaacgggaaacagtgtggtagtgagtagtgtaatgttgc  2256800                                     --------->At4g35610                             --------->ARR14(2)                          <---------------AGL15                          --------------->AGL15                         <-----------------AGL2                         <-----------------AG                         ----------------->AGL1                         ----------------->AGL2                         ----------------->AGL3                         <-----------------AGL3                         ----------------->AG                    --------->ANAC55(2)                       --------->ANAC58                          <---------ANAC58                       --------->ANAC58          <---------bZIP60(2)  <----------DOF2                     ---------->DOF2 XXXXXXXXXXXXXXXXXXXX>MIR2111A/B------->TEIL--------->TOE2(3)                 <---------ANAC58   --------->GLK1(2)            <---------ANAC58                 <---------ANAC58   <---------ARR14(2)          --------------->AtSPL8                 <---------ANAC46   --------->ARR14(2)          --------------->AtSPL3                <------NtERF2<---------ARR14(2) <---------AtMYB61<---------ANAC55(2)        <---------SPL7 --------->ANAC46  <---------AtLEC2    <---------DAG2     --------->TOE1(3) --RAV1(1)   <------ZmHOX2a(1)     <---------GLK1(2)         <----------DOF2  ------->TEIL--------->ZAT18   agtttgatgcggtaaggaggcgtttaagccaaatttggaatctgcatggtgaggttgcaacggctttacgtacttttaagaacctcaaaatgtacacaaa  2256900                            <--------P                        --------->LBD16                 <---------AtMYB61                 --------->MYB59               <---------MYB52(1)             <---------DEAR3(2)             <---------MYB46(3) <---------REM1(1)          ----------->HVH21         --------->ALFIN1--------->LBD16     <----------DOF2                                ---------       <---------ANAC58 <---------LBD16   <---------ARR11(3)                   <-----------------AGL1       <---------ANAC58<---------LBD16    --------->ARR11(3)                <---------PCF2 <------NtERF2    --------->DAG2<------MYB46(1)    <------ZmHOX2a(1)   ----------->GT1    <---------ATERF1(1)------   ---------->DOF2<------MYB83 <---------TOE2(3)   <----------DOF2       --------->ALFIN1 -----------   caccaaaaagcgtgtcggtttggttcccgggttgatgtaggagacatctttttctttaggggtgaaatgggtctagtggggctccattcaggcaccattg  2257000                                      ----------->GT1                                               -                                   <------ZmHOX2a(1)                                              ---                                 --------->ALFIN1                                                <---                               <---------TOE1(1)                                                -----                               <---------TOE2(1)                                                <----                          --------->LBD16                                                       -----                         <---------ANAC46                                                       -----                        <---------LBD16                                --------->LBD16          <----                      <------ZmHOX2a(2)                        <---------CCA1(2)                <----   ----------->GT1    ====================HOX2a_HOX2a          <---------At4g35610             ------   <---------ANAC46  <---------ARR11(3)                    <-----------HVH21                   <----- >ATHB12             --------->ARR11(3)                   <---------ZAT6                       ------ ----->HVH21<------ZmHOX2a(1)------>NtERF2              xxxxxxxxxxxxxxxx>smallRNA(s)          ------- >RAV1(1)   =================HOX2a_HOX2a              <---------MYB52(1)                --------->MYB52(1)   acatggagtttataggagttgaagatcacggggacgaggagggtaaacagattgcagttagtgtcatctcttcagggaaaaatgctgacaaaaccgaaga  2257100          <---------TOE2(3)     --------->ANAC58         --------->AHL20(2)  <---------SPL7         --------->YAB1     <---------MYB46(3)      --------->TOE2(3)    <---------------AtSPL3    <-------TEIL         <---------ANAC46 -------->LBD16          <------MYB83 --->ZmHOX2a(2)          <------MYB46(1) ---ZmHOX2a(2)          <---------AtMYB61 ---->ARR11(3)          --------->MYB46(2) -----ARR14(3)          --------->MYB55(2) ---->ARR14(2)          --------->MYB111(1) ---->ARR14(3)          <---------MYB46(3)                                                      ----- -----ARR11(3)          --------->MYB111(2)                                                  -------- -----ARR14(2)     --------->LBD16                                                --------->KAN4(2) --->HSFC1(2)    <---------LBD16--------->ANAC58                                 <----------TaMYB80 ----HSFB2a(1)  <---------At5g28300      ------->TEIL                     ----------->GT1  ---------- --->HSFB2a(1) <-----------GT1 --------->SPL7                   <---------GLK1(2)<---------KAN4(1) <- ---->ARR10 <---------ICU4 <---------------AtSPL8            --------->YAB1      --------->KAN4(1) <-   tcccgattcattaatatttaccgggtttggtggtacggacatgtatcatggacaaccatgtaatcagaaacttgagaggttgaatattccactagaagcc  2257200   <---------HSFB2a(2)   --------->HSFB2a(2)                                               <-----------GT1  <---------LBD16                                    <------ZmHOX2a(1) ---->RAP2.6(2)                                     <----------ID1   <---------AHL20(2) ->ANAC46                               <---------TOE2(3)         <---------ICU4 >DOF2    ---------->DOF2     --------->MYB52(2) ---------->DOF2 --------->ICU4 --------DAG2             <---------MYB46(3)----------->GT1 --------->YAB1 ---------DOF2            ----------->GT1 <------ZmHOX2a(1) ----------->GT1  <---------YAB1<---------YAB1   gcttttcggaagaaaagtattgtgagagtggttagatgtatgaaggatgaaaaaaggacaaatggtaatatttacatatatgatggaacatatatgatta  2257300                 <------MYB83                                                                --------                 <------MYB46(1)        --------->AHL20(2)                                   <-------                 ----------->GT1        <---------AHL20(2)                          <---------MYB52(1)                --------->MYB59     ----------->GT1                               <-----------------AGL2              <------ZmHOX2a(1)     <---------ZAT6                                ----------------->AGL1     --------->ALFIN1         <-------TEIL                                     <----------DOF2   ctaataggtgggaagaggaaggtcaaaatgggttcatagtgtttaaattcaaattggtgagagagcctgatcaaaaacccgctttcggtatttggaaatc  2257400                                                    ------>ZmHOX2a(2)                                                   --------->GLK1(1)                                                   <------ZmHOX2a(2)                                                   <---------GLK1(1)                                                  --------->ARR11(3)                                                  --------->ARR14(3)                   <---------ANAC46                                                  <---------AGP1--------->At4g35610    <------MYB83                                                  <-----------ARR10                    <------MYB46(1)                                                  <---------ARR14(3)         <---------TOE2(3)                                                  <---------ARR14(2)       ---------->DOF2                                                  <---------ARR11(3)   <-----------ARR10                                                  --------->ARR14(2)   --------->GLK1(2)    <---------GLK1(2)                      --------->TOE2(3)    <---------ZAT2        --------->MYB46(2) ->GLK1(1)            <---------ANAC46   <---------YAB1         <---------At4g35610   <---------MYB46(3) --GLK1(1)  <------ZmHOX2a(1)      <---------ARR11(3)           --------->ZAT2    --------->MYB52(2)   gatacagaattggaggaatggtttgagtataagaccaggtcttatccttgaagatctctctaatggagctgagaatctaaaggtttgtttggtgaatgaa  2257500  Previous    Next  AGI:  At2g05900.1    Description:  SET domain-containing protein / YDG/SRA domain-containing protein. Identical to Putative histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH10 (SUVH10) [Arabidopsis Thaliana] (GB:Q3EC60); similar to SUVH3 (SU(VAR)3-9 HOMOLOG 3) [Arabidopsis thaliana] (TAIR:AT1G73100.1); similar to Histone-lysine N-methyltransferase, H3 lysine-9 specific SUVH1 (Histone H3-K9 methyltransferase 1) (H3-K9-HMTase 1) (Suppressor of variegation 3-9 homolog protein 1) (Su(var)3-9 homolog protein 1) (NtSet1) (GB:Q93YF5); contains InterPro domain Pre-SET zinc-binding region; (InterPro:IPR007728); contains InterPro domain SRA-YDG (InterPro:IPR003105); contain Range:  from: 2256967    to: 2257905    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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