Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                      <---------------AGL15                                                    --------------->AGL15                                                   ----------------->AGL1                                                   ----------------->AGL2                                                   <-----------------AGL2                                                   <-----------------AGL3    --------->ANAC46                               ----------------->AGL3    ------>MYB83                                 --------->ANAC58    --------->ANAC58                             --------->ANAC58                      <----------DOF2    --------->ANAC58     <-----------GT1   <-------TEIL<---------ARR14(2)       --------->YAB1    ------>MYB46(1) <---------AHL20(1) <---------TOE1(3)                       <---------YAB1 ----------GT1      --------->AHL20(1) <---------YAB1  --------->ARR14(2)   --------->ICU4      ----- -----ICU4       --------->AHL20(2)    <---------TOE2(3)             ---------->DOF2   <---------DAG2   tttaccaagccatagttttttatatattaactattttgtttaagattcatgaagccatatatggtagcatcaaaagccttgattataagctttttgagaa  1059300                                                           <---------YAB1                                                        <---------AHL20(2)                                                     --------->AHL20(1)                                                     <---------AHL20(2)                                                     --------->AHL20(2)                                                    <---------AHL20(2)                             <---------ICU4       --------->YAB1                            --------->ICU4      --------->AHL20(2)                                  <                    <----------DOF2            --------->YAB1<----------DOF2                   ------       <---------ALFIN1    <---------YAB1     --------->AHL20(2)                               ------ ---->CCA1(2)   <---------ALFIN1    --------->ATHB12--------->AHL20(2)                         ------   atgagagtcacacatgatacacctttagtaatattgactcattagaaaataaaaataatttatctttgttatattttctcaaattttgctcaaacacaag  1059400                                                             --------->ARR11(3)                                                             <---------AHL20(1)                                                             --------->AHL20(1)                                                          --------->AHL20(2)                                                       --------->AHL20(2)       ----------->GT1                                --------->AHL20(2) ---------ALFIN1                              --------->AHL20(2)      --------->ATHB12 --->ANAC58                        <-----------GT1--------->AHL20(2) --------------->AGL15 --->ANAC46               --------->LBD16     <---------AHL20(2)     <---------------AGL15      ----- --->ANAC58           <-----------GT1--------->ANAC55(2)  <---------AHL20(2)       <------ZmHOX2a(1)   cagcacttgatgtaaaacagtttttttccgaataattttacataatattaaaaaaaataaaaaaatattgactcattagagaagaggaacgacttctaac  1059500                                                                                              <------ZmHOX2a(2)                                                                                            <--------                                                                                            ---------                                        ------>ZmHOX2a(1)                              ----------->HVH21     <---------HSFC1(2)                --------->TOE2(3)        --------->CCA1(2)   --------->ALFIN1     --------->HSFC1(2)          <-----------GT1               --------->ARR11(3)  <---------ZAT14 ---->ZAT6                 --------->AHL20(2)                  <---------ARR11(3) --------->ALFIN1  <   agtaagaagcctctcactctctctctctaaaaaatacacctccttagtctctccctctctcgatagatatatgtgtgtgtgtgtgtgtggtgacagatca  1059600                                          <---------HSFC1(2)                                          --------->HSFC1(2)                                          --------->HSFB2a(1)                                          <---------HSFB2a(1)                       <-----------GT1                                        --------->ARR14(2)                      --------->AHL20(2)       <---------MYB52(1)               <---------ARR14(2)                ------>MYB46(1)<----------DOF2     <---------ANAC58             <------ZmHOX2a(1)               --------->ANAC46 <-----------GT1     <---------ANAC58             ===========================HOX2a_HOX2a<---------MYB46(2)       <---  <-----------GT1      --------->ZAT18 ======================HOX2a_HOX2a<---------MYB111(1)    ------ -At4g35610          <---------ZAT18   <------ZmHOX2a(1)         --------->ZAT18<---------AHL20(2) >At4g35610<----------DOF2    ---------->DOF2           ------>ZmHOX2a(1) ------>MYB83   <---------DAG2 ---------ICU4  <------------CBF <----------ID1       ------>ZmHOX2a(2) <---------MYB59 <---------DAG2   cattattccgttcctttgaattgagccctctaaaaaggacaggaacctccttgtgatcctccttgtgtccacaacctaacattttattccccttttcctc  1059700                                                                                                    -                                                                                                    =                                                                                                    <       *TSS                                           --------->GLK1(2)                             -     <<<<<<<<<TBF1             --------->TOE1(3)      <---------ARR11(3)                  <-------TEIL ------CCA1(2)                 --------->TOE2(3)      --------->ARR11(3)                --------->ARR14(2) >ZmHOX2a(1)          ------>ZmHOX2a(1)          --------->LBD16                        <---------ARR14(2)   tatcttcttcttcattcgctcttcctctccaaaccctaatttccaaaaaccctgaaaatctttgaaatatttctgaagaaccatatagcatatacatata  1059800                                                                      --------->YAB1                 <------NtERF2                                       <---------ATHB12                 --------->ANAC58                             <---------AHL20(2)                 --------->ANAC58                         <---------AHL20(2)                ----------->RAV1(1)  <---------ANAC58     --------->AHL20(2) ---------->RAV1(2)                  --------->TOE2(3)<---------YAB1 --------->AHL20(2) ===========================RAV      <---------ANAC58<---------AHL20(2) ---------At4g35610        <---------YAB1            <---------AHL20(1)              ---------->DOF2 -------->At4g35610    <---------GLK1(2)             --------->AHL20(1)           ------>ZmHOX2a(1)   tcatctgaaacttgaaggcaccacaaattcttcttgattccttgatcatctatattatatttatataatcaataaatattcttcctatacagcgagagag  1059900                        <---------SPL7                       <---------ANAC58                       <---------RAP2.6(2)                       <---------ANAC58                    ---------->DOF2           ------>ZmHOX2a(1)                       <---------ANAC46  --------->ZAT2 --------->RAP2.6(2)          <----------DOF2         --------->ANAC58      --------->At4g35610   --------->ANAC58                ================         --------->ANAC46   ------>ZmHOX2a(1)        --------->ANAC46           --------->GLK1(1)         --------->ANAC58<------NtERF2   <---------ZAT2 ----------->RAV1(1)     <---------GLK1(1) <-- ----------->GT1  <---------ICU4--------->YAB1       --------->ANAC58     <----------DOF2        <---   agagagtatataagctataaatatggcgtcctcatcagaactaagcttggattgcaagccacaaagctactctatgcttttgaaatcctttggagataac  1060000                  --------->ANAC46              ----------->RAV1(1)             <---------HSFB2a(2)              ------->GAMYB                   --------->HSFB2a(2)                                   -              --------->AtMYB61  ------>ZmHOX2a(2)                                                  -             <---------MYB55(2)--------->ARR14(2)                                --------->ANAC46 <--             --------->MYB46(3)--------->ARR14(3)                                --------->ANAC58 <--            ------>MYB83       --------->ARR11(3)                                --------->ANAC58 <--            ------>MYB46(1)    <---------ARR14(3)                       ------>NtERF2 --------->At4g35610        <------ZmHOX2a(2)      <---------ARR14(2)                  <------ZmHOX2a(2)  <---------ZAT2- ==============HOX2a_HOX2a     <-----------ARR10                   <---------------------WRI1 <------ ---------HVH21 <---------ALFIN1<------ZmHOX2a(2)                 <---------ARR11(3)  <---------At4g35610 -------DOF2-------->P         <---------ARR11(3)<<<<<<<ZML2      --------->ARR11(3)  --------->ZAT2-   tttcagagcgatccaaccacacataagcttgaagatcttctctctcgcctagaacaagaacgtctcaagatcgatgccttcaaacgcgagcttccccttt  1060100                                                     ------->TEIL                                               ------>ZmHOX2a(2)        --------->TOE1(3)                     <------ZmHOX2a(2)        --------->TOE2(3)                     --------->CCA1(2) -------->ANAC58                             --------->ARR14(2) -------->ANAC58                             <---------AGP1 -------ANAC58                      <---------------AGL15 -------ANAC58                      --------------->AGL15 <---------AHL20(2)               <---------DAG2 -------AtLEC2           --------->GLK1(1)   <---------ARR11(3)              ------>ZmHOX2a(2) -------->AtLEC2    <-------TEIL <-----------GT1  <---------ANAC46         --------->ARR11(3)   <---- ----DOF2------>ZmHOX2a(1)<-----------GT1    --------->AGP1                <---------ARR11(3)<------- -------->ANAC46<---------------AtSPL8       --------->ARR11(3) <---------ANAC46           <---------   gcatgcaactccttaacaatggtacatatatccatttacaatatttagatctacgtatatatacttgtgtataatatgatcttcaaataatccctttatt  1060200  Previous    Next  AGI:  At2g03500.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT1G68670.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO65598.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 1059707    to: 1062407    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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