Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                                           --------->ANAC58                                                                         <---------ANAC58                                                                         --------->ANAC58                                                                         <---------ANAC58                                                                         <---------ANAC46                                                                         <---------ANAC55(2)                                                                         <---------bZIP60(1)                                                                         --------->bZIP60(1)                                                                         <---------TGA2(1)                                                                         --------->ANAC55(2)                                                                         --------->TGA2(1)                                                                        ----------->STF1                                                                       <---------TGA2(2)        <----                                                                      ----------->TGA1          -----                                                                      <---------MYB52(1)        -----                                                                    <---------ANAC58            -----                                                                    <---------ANAC58         --------                                                                    <---------ANAC46         --------                      <---------LBD16                               <---------ANAC55(1)      --------             --------->ANAC58           <---------ALFIN1            --------->ANAC55(2)     ---------             --------->ANAC58      <---------ANAC58                 <---------ANAC55(2)    <xxxxxxxxx          <---------GLK1(2)        <---------MYB46(3)     <---------ALFIN1                --------->MYB46(3)          <---------ARR11(3)       --------->MYB52(2)   ----------->RAV1(1)       <-----------HVH21 -          --------->ARR11(3)       <---------ANAC58  --------->ANAC58 ----------->HVH21 ------>NtERF2 ->TOE2(3)<---------ARR14(2)      <-------TEIL       --------->ANAC46--------->LBD16    --------->PCF2 ->TOE1(3)--------->ARR14(2)  <---------TOE2(3)      --------->ANAC58<-----------HVH21----------->HVH21   acccttcttcaagatactcaattttggggattagggttcgttccacattcgatacaagcaacaccgtgttccgtgacgtaatcgtgtcgcgacccacgaa  900500 <---------TOE1(2) -----ARR14(2) -->TEIL                        --------->At4g35610 ---->ARR14(2)            <------ZmHOX2a(1) ---->GLK1(2)   --------->TOE1(3) ->ANAC58       --------->TOE2(3)                                                           <-------- ->ANAC58      ----------->GT1  <---------ZAT2                                              <-------- ->ANAC46   <------ZmHOX2a(1)   <---------At4g35610                <---------WRKY12 <---------TOE2(3) >LBD16   <---------TOE2(3)    ------->TEIL   <---------At4g35610===================HOX2a_HOX2a xxxxxxxsmallRNA(i)---------->DOF2            --------->At4g35610<------ZmHOX2a(1)  --------->MYB59 ----->ZmHOX2a(1)--------->DOF5.7(2)   --------->GLK1(2)  --------->WOX13(1) <------ZmHOX2a(2)   tcctagggttttgaggaacgttaatgcaggacgaagctgataatctacagatgaaattagcaatcgaggacaacgagagatcgatttaggtatgtcttgc  900600                                                                                       <-------------                                                                                     <---------ANAC46                                                                                   <-----------HVH21-                                                 --------->ARR14(2)        ----------->GT1         --                                           <---------GLK1(1)              --------->HSFB2a(2)      --                                          --------->ARR11(3)           --------->GLK1(2)          ---                                          <---------ARR11(3)           <---------ARR14(2)        ----                                      <--------P <---------ARR14(2)    --------->ARR14(2)  --------->CCA1(2)                                    ----------->GT1      <------ZmHOX2a(2)<---------HSFB2a(2)   -----                                --------->ARR11(3)     <------ZmHOX2a(1) <---------LBD16  --------->ARR11(1)             --------->ATHB12   --------->ARR14(2) <-------TEIL     <---------------AGL15 <---------ARR14(2) -ANAC58    <---------YAB1      <---------ARR14(2)--------->GLK1(2)<-----------------AGL1 --------->ARR14(2) -ANAC58<---------GLK1(1)     ----------->ARR10  <---------GLK1(2) ----------------->AGL1<------ZmHOX2a(1)   tctgaaattgaaatctcattggataagaagcgaagaactggtaagatttcagattcaggatcagaagttaacaaatctggaaacatgtcgaggatacgac  900700      --------->ARR14(2)      <---------ARR14(2)     <------NtERF2    <---------MYB46(3)    ------>NtERF2   <---------DEAR3(1)   <---------ANAC58   <---------ANAC58   <---------ANAC46  <---------LBD16 ------->GAMYB                <---------ZAT14 --------WRI1        --------->ALFIN1 -------->MYB46(3) <---------ANAC46                                  --------->ARR14(2) ---->MYB83        --------->LBD16              ----------->HVH21<---------At4g35610             <--- ---->MYB46(1)   <---------LBD16               --------->ATERF1(1)   --------->MYB52(1)          ---- ------>MYB52(1) --------->ZAT18              <---------ATERF1(1)--------->At4g35610          <------ ----->AtMYB61 --------->GLK1(2)----------->ARR10--------->MYB52(1)  <---------ARR14(2) <---------LBD16 ---->MYB46(3) <---------ARR14(2)      ----------->HVH21<------ZmHOX2a(1)    --------->CCA1(2)-------   caacggcgggtcttgagagtccggtggaagagagtagagtctcgacggagacgacggaggagattggagcagaacggagagatgggtttactcggagagc  900800                     ----------------------->TaNAC69(2)                  <---------ARR11(3)                  --------->ARR11(3)                <---------TOE1(3)                <---------TOE2(3)        ------>ZmHOX2a(2)                                                                         <--       <------ZmHOX2a(2)                                                                          <--       <---------GLK1(1)                                                                         <---      <---------ARR11(3)                           <---------GLK1(2)                           <-----      <-----------ARR10                     --------->LBD16                                    ======      <---------ARR14(2)                   --------->LBD16                 --------->LBD16     <-----      --------->GLK1(2)                    --------->ANAC58                ------>NtERF2       ------      --------->ARR11(3)                   --------->ANAC58  --------->At4g35610               ------      --------->ARR14(2)  ----------->GT1  <---------HSFB2a(2)            <---------DEAR3(1)   ------     <------ZmHOX2a(1)   <---------TOE1(3) --------->HSFB2a(2)           <---------LBD16     -------- -------DOF2 --------->DOF5.7(2)           --------->ANAC46 <---------ARR14(2)              ------>ZmHOX2a(1) ----------------->WRI1  <---------TOE2(3)<---------LBD16   --------->GLK1(2)             <---------ICU4 ---ARR11(3)--------->TOE1(3)            <---------LBD16    <---------ARR11(3)   --------->HSFC1(2) < -->ARR11(3)--------->TOE2(3)       <---------GLK1(2)       --------->ARR14(2)   <---------HSFC1(2)--   tttgtgaggatctacgttaaggtcttgaaggtaaataagcttctcccggaatagaatcccagtatctgaagtttctccggcgaaacatctaatcctcacg  900900                   ---------->DOF2             --------->At4g35610             <---------At4g35610             <---------LBD16             --------->ATERF1(1)             --------->RAP2.3(1)            <---------RAP2.6(1)            <---------ATERF1(1)            <---------RRTF1(1)            <---------ERF1            ------>NtERF2            <---------DEAR4(2)            <---------RAP2.3(1)           <---------DREB2C(2)           <---------RRTF1(3)           <---------DEAR3(1)           <---------RRTF1(2)           <---------RAP2.3(3)           <---------RAP2.3(2) -------DEAR3(1)<------NtERF2 -------ANAC46 --------->LBD16 ------LBD16<---------ORA47(2)                       <---------ANAC46 ----O2  <---------ATERF1(1)                         ----------->GT1 =============================bZIP_DOF          <---------DEAR3(2) ----TGA1a --------->DEAR3(1)                   <---------MYB46(3) --->O2 --------->ANAC46                       <---------At1g77200 --->TGA1a<---------ABI4(1)                    <---------DEAR3(1)--------->DAG2    --------->ALFIN1 --->ANAC46<---------ATERF1(2)               *TSS <---------MYB52(1)        <----------DOF2  -------- ->MYB52(1)<---------RAP2.6(2)           <---------ICU4         ---------->DOF2---------->DOF2 ------NtERF2<------NtERF2              <---------YAB1  ----------->GT1   <---------ATHB12  <<<<<<<<< ------->LBD16<---------ANAC46        --------->YAB1<---------AtMYB61 ------------>CBF----------->GT1   gcggagaaacacggcggcggaaaaagagaacaccttgctatcatcatcgtcggtgaggtagaaaaaaaaagtttcaatctttaaagtgtggataaaacaa  901000                                         --------->ICU4                                       ---------->DOF2                                    <---------At4g35610                                <-----------HVH21                   --------->ICU4   --------->At4g35610      ----------->GT1      ----------->HVH21                    <-------GAMYB               <<<<<<<<<TBF1     ----------->GT1     <---------REM1(1)                     <---------MYB46(3)        <<<<<<<<<TBF1 ---->CBF     --------->YAB1--------->MYB52(1)      <---------ANAC46             <---------ANAC58 <<<<<<<<LFY  ----------->GT1  ------->GAMYB     --------->ANAC46                <---------ANAC58   <   tggaagaagggtaaaatggtaattctggtgtaacggtcagataaagattaaacgacgtagttttttggttgagagttgtttctgcttgttcttcttcttc  901100                                                                    --------->YAB1                                                                   <---------ATHB12                                                                 --------->WOX13(1)                                                              --------->ANAC46                                                              --------->TOE2(3)           --------->ARR14(2)                                 --------->ANAC58       ------>ZmHOX2a(2)                                      --------->ANAC58      <------ZmHOX2a(2)                                      --------->MYB46(3)     --------->ARR14(2)                                 <-------GAMYB     --------->ARR11(3)                             --------->GLK1(2)     <---------ARR11(3)                         <----------CDC5--------->LBD16     <---------ARR14(2)                <---------MYB52(1)<---------MYB52(1)    <------ZmHOX2a(1)        <---------ICU4    --------->LBD16--------->RAP2.6(2) --------->YAB1              --------->YAB1   <---------ANAC46------->GAMYB ---------ATHB12            <---------ATHB12 <---------LBD16<---------At5g28300       --------->ZAT6   caatgaggatccctattctcaagcggcttaatcataagaccggtttttgcgcagagtctgttaaccgcaatcatcttctctgtctctatctctacctctg  901200                                                                  ------>ZmHOX2a(2)                                                                 <------ZmHOX2a(2)                                                                <---------ARR14(3)                                                                --------->ARR14(3)                                                                --------->ARR11(3)                                                                <---------AGP1                                                                <---------ARR14(2)            <------                                                                --------->ARR14(2)          <--------                                          <<<<<<<<<TBF1         <---------ARR11(3)          <--------                                     <----------DOF2    ------>ZmHOX2a(1)             --------->ZAT2                                 <-----------GT1        <----------DOF2      <--------P     <--------                                 ---------->ID1         =================HOX2a_HOX2a  <---------ZAT2    <---------GLK1(2)           <-----------GT1         ================HOX2a_HOX2a   --------->At4g35610   gttttcgattcttcgtttcgaagttttttttttttttccctttcttcttcaagaggtcctttttaagatctcgctcatggttagtatcagcttggcgttt  901300     --------------->AGL15     <---------------AGL15    ----------------->AG    <-----------------AGL1    <-----------------AG    <-----------------AGL2    ----------------->AGL1                  <---------CCA1(2)    ===============================================================MADS_MADS  <-----------GT1  <-----------GT1       ------>ZmHOX2a(1) -GAMYB       <--------P            <----------DOF2--------------->AGL15 -ANAC46   --------->MYB59   <XXXXXXXXXXXXXXXXXXXXMIR854A-E                                        -- -ANAC58   <---------TOE2(3) <<<<<<<<<TBF1<---------CCA1(2)       ------------>CBF            <------ -ANAC58<----------DOF2<----------DOF2  --------->TOE2(3)        <-----------GT1          ---------->DOF2   gaatttgcctctttaggtaagtttccttttcttcttctctttccttatctcttcttaataagggttttcacaatctctctgttttcttcagaaaaagatt  901400  Previous    Next  AGI:  At2g03050.1    Description:  mitochondrial transcription termination factor-related / mTERF-related. similar to mitochondrial transcription termination factor-related / mTERF-related [Arabidopsis thaliana] (TAIR:AT2G34620.1); similar to hypothetical protein [Vitis vinifera] (GB:CAN77430.1); contains InterPro domain Mitochodrial transcription termination factor-related (InterPro:IPR003690) Range:  from: 899689    to: 900945    Orientation: Reverse Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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