Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                         --------->DAG2                      ---------->DOF2                  --------->ANAC58                  --------->ANAC58          --------->CCA1(2)               <---------ZAT6   --------->YAB1         <---------ARR11(3)   --------->ANAC58            --------->ICU4         --------->ARR11(3)   --------->ANAC58        <------ZmHOX2a(1)       <---------TOE2(3)    ---------->DOF2   ---------->DOF2    --------->TOE2(2)    ---------->DOF2 --------HVH21    --------->ANAC46 --------->ICU4 --------->TOE1(2)     <------ZmHOX2a(1)           -   atcagggctaagatataaacacgataaagggaaagtaatgagtagtggcaaagctaggaaatgataacatatgaggactggccagagagaaagagataga  75000                                                                                          <------ZmHOX2a(1)                                                                                     ----------->RAV1(1)                                                                                     --------->AtMYB61                                                                                     <---------ALFIN1                                                                                    --------->ANAC46                                                                                    --------->MYB46(3)                                                                                 --------->MYB46(3)                                                                                <------ZmHOX2a(2)                                                                                =================HOX2a_HOX2a                                                                               --------->AGP1                                                                               <---------ARR11(3)                                                                               <---------ARR14(2)                                                                               --------->ARR11(3)                                                                               --------->ARR14(2)                                                                              <---------At4g35610              --------->ANAC58       ----------->GT1                          --------->GLK1(1)              --------->ANAC58    <---------STY1(2)                           --------->At4g35610       --------->ANAC58   --------->HSFB2a(2)                             ------>NtERF2  --------->ANAC58       --------->ANAC46  ----------------->AGL2                           <-----------HVH21       --------->ANAC58--------->ZAT18                                    --------->LBD16--------->ANAC46 ---------->GT1   ---------->DOF2 --------->STY1(2) --------->ANAC46    <---------LBD16  --------->ANAC58   aatggaaacaaggaagacgaaatagcgcccagaattagctagtaaaaacagtccaagtcaagtttaagacttgctccggcagatccaccacaggacacca  75100                                                                                                   <-                                                                                                   --                                                                                                   --                                                                                              <------MYB46(1)                                                                                              <------                                                                                              <------MYB83                                                                                             --------                                            --------->ANAC58                                 <-------                                            --------->ANAC58                                 <-------                                          ---------->DOF2                                 <---------MYB46(3)                                       --------->LBD16                                    --------->MYB55(2)                                       ------>NtERF2                             --------->ANAC46  <-                                      --------->DEAR3(1)                      --------->TOE2(2)    <-                                     <------NtERF2                            --------->TOE1(2)------                                    ------>NtERF2---------->DOF2  <---------TOE1(2)      --------->ALFIN1                                 <-----------HVH21                <---------TOE2(2)    <-----------RAV1(1)                                <-----------RAV1(1)               <---------TOE2(3) ------->TEIL <---            --------->ZAT18<------ZmHOX2a(1)----------->GT1       <---------TOE1(3) --------->GLK1(2)   aaatcagagacatgttcactaaaatcggaggaatttgtcgccgagaaagcaaaaagaaaacacaatccaaggttatggaatctacgaacctgtgggtggt  75200           --------->ANAC46        --------->ANAC46        --------->ANAC58        --------->ANAC58      --------->ANAC46 ------>ZmHOX2a(2) --------ARR11(3) ------->ARR11(3)       <---------LBD16 ------->ARR14(2) ----------------->AGL3 ---MYB46(3)------>NtERF2--------->HSFB2a(2) ->ALFIN1  --------->ANAC58 <---------ARR14(2)          --------->At4g35610<---------ZAT6 --DEAR3(1)--------->ANAC58 --------->ARR14(2)    <---------ARR11(3) <---------ARR11(3) --AtMYB61 --------->DEAR3(1)               --------->ANAC58         --------->ARR14(2) --------AGP1     <-----------------AGL1    --------->ANAC46         --------->ARR14(3)           --- --------ARR14(2) <-----------------AGL3    --------->ANAC58         <---------ARR14(2)           <-- ----------------->TaNAC69(2)           <---------HSFB2a(2)          --------->ARR11(3)  --------->ZAT14 ------MYB46(3)   ----------------->AGL2--------->HSFB2a(2)          <---------ARR14(3)  <---------ZAT14   ggatctatacacgacgcccctccattttcggaacttgctcttctccaagctaaatcttatctgaaatagaagatattgtgttacagactagtttactgag  75300                            <---------At4g35610                            --------->At4g35610                    <------NtERF2                   <---------ATERF1(1)                   <---------DEAR4(2)                   <---------RAP2.3(1)                   ------>NtERF2                  <---------RAP2.3(3)                  --------->ATERF1(2)                  <---------RAP2.3(2)                 <---------ABI4(1)                 --------->SPL7                 --------->ATERF1(1)                --------->ALFIN1                ------>NtERF2                <---------ATERF1(1)               <---------SPL7               <---------MYB46(3)               <---------DEAR3(1)              <---------ANAC58     <-------GAMYB<---------ATERF1(2)    <------MYB46(1)<---------ORA47(2)    <------MYB83<------NtERF2   --------->MYB55(2)   --------->ALFIN1   <---------MYB46(3)<---------DEAR3(1)  <---------MYB55(1)--------->ATERF1(1)  <--------P  <---------ANAC58  --------->ALFIN1<---------DEAR3(1)                                                     *TSS   <---- <---------MYB52(1)<---------ERF1            --------->AHL20(2)                        --------->ANAC46 ------>ZAT18 --------->ALFIN1          ------>ZmHOX2a(1)                        --------->GLK1(1)--- -------LBD16 <---------ANAC46       ------>ZmHOX2a(1)                     <---------ETT(2)--------->At4g35610   tccggtgggttacagggcgggcggcgatggagcagagtcctcctcaaaaaaattccagtcttcttcttatcgctcgatcgacgaattccaggcagtggca  75400                                                                                         <------MYB83                                                                                         <------MYB46(1)                                                                                        --------->MYB59                                                                                        --------->MYB111(1)                                                                                        <---------AtMYB61                                                                                       <--------P                                                                                      <---------ANAC58                                                                                      <-------GAMYB                                                                                      <---------ANAC58                                                                                     <---------MYB46(3)                                                                                     --------->MYB52(2)                                                                                     --------->MYB55(2)                                                                                     <------MYB46(1)                                                                                     <------MYB83                                                                            <---------YAB1                                                                           <---------AHL20(1)                                                                           <---------AHL20(2)   <------------CBF           --------->LBD16                              --------->AHL20(2)    ---- <---------YAB1             <---------LBD16                                --------->AHL20(1)   ----- --------CBF    <----------DOF2 ------>NtERF2                             --------->YAB1<---------MYB46(3) ------>WRKY38(1)       <--------P        --------->ARR14(2)              --------->AHL20(2)   ------   ttgactattgctgcatttctttctgggtaagccgggcctctcggtataggcccaaaccattctaaggcccaaaccattatattaagttggttggtccacc  75500                                                                                       --------->LBD16                                                                                      --------->LBD16                                                                            <------ZmHOX2a(2)                                                                           --------->ARR14(2)                                                                           <---------ARR14(2)                                                                           --------->ARR14(3)          --------->At4g35610                                              --------->AGP1 <---------ATHB51          --------->ZAT2                                                   <---------ARR11(3)       --------->At4g35610                                                 --------->ARR11(3)       <---------At4g35610                                                 <---------GLK1(2)      ----------->RAV1(1)                                                 --------->GLK1(1)    <---------ZAT2               --------->ZAT2              --------->MYB52(2)      <---------LBD16    --------->ZAT2               --------->At4g35610         --------->MYB46(2)------>ZmHOX2a(1)    --------->At4g35610          <---------At4g35610         --------->MYB111(1)--------->TOE1(1)    <---------At4g35610          <---------ZAT2            <---------MYB52(1)------>ZmHOX2a(2) ------>DOF2                  <---------At4g35610        ===========================HOX2a_HOX2a ---->AtMYB61       *TSS  <---------ARR14(2)             ==========================HOX2a_HOX2a  ----- --->ANAC46    <<<<<<<ZML2--------->ARR14(2)             ------>ZmHOX2a(1)<---------GLK1(1)     <----   aaagtcagcagcagctagaacaagagcgactctgcagctgctcttctcccgcttccttcctgttagttagcctcagagatcctcgttccccgataatgga  75600                           --------->ZAT2                           --------->ZAT14                           <---------ZAT2                           <---------ZAT14                           --------->At4g35610                           <---------At4g35610                                    <-----------ARR10                        <---------At4g35610                                    ----------->RAV1(1)                        --------->At4g35610                                    <---------ALFIN1                      --------->ZAT18                                         --------->RAP2.3(3)                      --------->ZAT14                                       ------>NtERF2                      <---------ZAT14                                      --------->DEAR3(1)                    <---------RAP2.3(3)                                   --------->ATERF1(1)                  <-----------HVH21                                      <---------ATERF1(1)               <---------At4g35610             <---------ICU4          --------->ATERF1(1)               --------->At4g35610             --------->YAB1         ------>NtERF2             <-----------RAV1(2)              <---------ATHB12       <---------PCF2            ------>ZmHOX2a(2)                 <---------YAB1<---------GLK1(2) --------->DEAR3(1) ---->ARR14(2) <---------ZAT2        <---------CCA1(2) <----------DOF2<---------ATERF1(1) -----ARR14(2) --------->ZAT2   <---------ZAT18<--------HAHB4        <---------PCF5   tttgggaaaactgatccagctgtctgcgctgctgtgcccatttcttctatcattacactttagaatcgctggggcctccgcccacatctactcttcccag  75700                                                                                <----------TaMYB80                                                                                --------->KAN4(1)                                                                                <---------KAN4(1)                                                                               ---------->TaMYB80                                                                            ----------->GT1                                                                           --------->MYB59                                                                   ------>ZmHOX2a(2)                                        <------NtERF2             <------ZmHOX2a(2)                                     <------NtERF2               <---------ARR11(3)                                     --------->ATERF1(1)         <---------ARR14(2)                            ------>ZmHOX2a(1)                    --------->ARR14(2)             <---------MYB52(1)     ------>NtERF2              --------->LBD16 <---------KAN4(2)             --------->At5g28300   --------->ALFIN1           <---------HSFB2a(2)          --------->DDF1  <------------------SPL14            --------->HSFB2a(2)     --------->ANAC46    ------>ZmHOX2a(1)       <---------HSFB2a(1)<----------DOF2   cccttccacgatgtcggtaattctctcctcctctacggtggcagcgagggcatcttcgcctcttcccgatctttaatcaggtatattctatggattacat  75800                                                                                                   <-                                                                                                  <--                                                                                                  ---                                                                                                 ----                                                                                          <--------P-                                                                                         <-----------HVH21                                                                                      <--------------                                                                                      ---------------                                                   <-----------RAV1(2)                <---------LBD16                                                  --------->ZAT14                    --------->MYB52(1)                                                  <---------ZAT14                    <---------At5g28300                                         <---------ALFIN1                     <------ZmHOX2a(1)  <---                          --------->ANAC46   ------>ZmHOX2a(1)           <---------HSFB2a(2)    <----      <----------DOF2--------->ANAC46 ------>ZmHOX2a(1)                 <---------LBD16  <---------MYB52(1)   tttcaactcttttgatgctctctactctactctactcatcctccctcctcactgcaggtttgagaacatcactctctggaggacaattaccggtaagggc  75900  Previous    Next  AGI:  At2g01060.1    Description:  myb family transcription factor. similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G13040.1); similar to myb family transcription factor [Arabidopsis thaliana] (TAIR:AT3G13040.2); similar to hypothetical protein [Vitis vinifera] (GB:CAN66505.1); contains InterPro domain Homeodomain-related; (InterPro:IPR012287); contains InterPro domain Homeodomain-like (InterPro:IPR009057); contains InterPro domain Myb, DNA-binding (InterPro:IPR014778); contains InterPro domain Myb-like DNA-binding region, SHAQKYF class (InterPro:IPR006447) Range:  from: 73258    to: 75389    Orientation: Reverse Links:  TAIR  MIPS    AGI:  At2g01070.1    Description:  similar to unknown protein [Arabidopsis thaliana] (TAIR:AT1G72480.1); similar to Os11g0546100 [Oryza sativa (japonica cultivar-group)] (GB:NP_001068063.1); similar to unnamed protein product [Vitis vinifera] (GB:CAO24763.1); similar to hypothetical protein OsJ_032883 [Oryza sativa (japonica cultivar-group)] (GB:EAZ18674.1); contains InterPro domain Transmembrane receptor, eukaryota; (InterPro:IPR009637) Range:  from: 75520    to: 77865    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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