Home Tools   - Search   - Colocalization   - Gene Analysis   - Gene Identification   - Small RNA Targets   - MicroRNA Targets Description Documentation Citations Downloads Publications History Contact Links Disclaimer	Search   Chromosome 1 Chromosome 2 Chromosome 3 Chromosome 4 Chromosome 5    Position Exon region Intron region UTR region AGI % Restriction to highly conserved TF binding sites (0-100)   Go to graphical and table display  1        10        20        30        40        50        60        70        80        90        100                                                  --------->YAB1                                                <---------ICU4                                               --------->ICU4                                               <---------YAB1                     ----------->RAV1(1)     <---------ICU4                     ------->GAMYB           --------->YAB1                    --------->MYB46(3)      <---------YAB1    --------->GLK1(2)                   ------>MYB83             --------->ICU4   <---------GLK1(2)                   ------>MYB46(1)       <---------YAB1    <---------TOE1(3)                 --------->TOE1(2)    <---------YAB1       <---------YAB1                --------->DEAR3(2)  <---------ICU4         <---------TOE2(3)                --------->MYB46(3)  -------->ATHB1     <----------DOF2           <---------HSFB2a(2)     <---------ATHB12  <---------YAB1                                 -  ---------->DOF2--------->TOE2(2) --------->ICU4   --------->ARR11(3)     ---------->DOF2          < ---------AHL20(2)--------->MYB52(1)--------->YAB1<---------YAB1 <----------DOF2    --------->TOE2(3) --TOE2(3) --------->HSFB2a(2)     <---------ATHB51 <---------ARR11(3)  --------->At5g28300        <-   attaaaaagaagtcgagaaccaacgacaaaagtttcaattattcttattattattatctttaagattctttagcagtaaaagttagcattaatacaaaac  28295000                                         >>>>>>>>>>WRKY26                                         >>>>>>>>>>WRKY38                                         >>>>>>>>>>WRKY43                                        --------->WRKY12                                        --------->WRKY38(1)                                    <--------HAHB4         <---------ZAT6             --------->ATHB12     <---------YAB1                --------->ICU4     <---------AHL20(2)   --------->YAB1                  <---------ATHB12   --------->AHL20(2)                   <---------ARR11(3)  <---------YAB1              --------->ANAC58    --------->AHL20(2)             <---------AHL20(2) -------->YAB1              ---------->DOF2       <---------AHL20(2)            <---------AHL20(2) --------HAHB4        <---------YAB1<---------ICU4--------->AHL20(1)            --------->AHL20(2) --------YAB1  ----------->GT1--------->ANAC58   --------->AHL20(2)    <---------At4g35610 --------->ARR11(3)   tattattatcagtgttactgtaatattgttgaaagccatcatttgaccaaaattaattaaacgcgttgttttcatcagagaataaaatttgaagatttta  28295100                                        --------->GLK1(2)                                       <---------GLK1(2)                                       <---------ARR11(3)                                       <---------ARR14(2)                                       --------->ARR14(2)                                      <---------HSFB2a(1)                                      --------->HSFC1(2)                                           --                                      --------->HSFB2a(1)                                          <-                          --------->ANAC58                                                         --                          --------->ANAC58                                        ----------->GT1  --                        --------->GLK1(1)                                         <---------MYB46(3)-                        <---------GLK1(1)       <---------DAG2                --------->ATHB12     <-                       <---------ARR14(2)       <----------DOF2     <---------------AGL15         ---                       --------->ARR14(2)  <----------DOF2          --------------->AGL15--------->YAB1             =======================================================================MADS_MADS    ----             --------------->AGL15    <---------HSFC1(2)           ==================================            <-----------GT1          ----------->ARR10             ----------------->AGL3--------->AHL20(2)  --------->YAB1      <------ZmHOX2a(1)--------->ARR11(3)  <---------AHL20(2)<---------YAB1  --------   aaaatcaaaacttttcacaaaataggatacccaataccgaagattctttccttttccatattaaaaatgtctaaaaatagttattggttaattatacaga  28295200       <-----------GT1                                                                ===============   <---------AHL20(2)                                                                 --------->bZIP60(2)   --------->AHL20(2)                      --------->ARR11(3)                         --------->TGA1a  <---------AHL20(2)                       <---------AHL20(1)                         --------->O2  --------->AHL20(2)                       <---------AHL20(2)                       <---------ALFIN1 ------->YAB1                           --------->AHL20(1)                <---------HSFB2a(2) -------HAHB4                           --------->AHL20(2)                <---------ANAC46 ------->ATHB12                         <---------AHL20(2)         <-----------------AG<-----------HVH21 ------>ATHB1                      <---------AHL20(2)              <-----------------AGL1   ------->MYC3 -------->TOE2(3)                  --------->AHL20(2)      --------->At5g28300 <---------HSFB2a(1) --------ICU4                   <---------AHL20(1)      <---------At4g35610    --------->HSFB2a(1)  < ------>ICU4 --------->AHL20(2) --------->AHL20(1)      --------->At4g35610   ---------->TaMYB80    < ----->GLK1(2)                 --------->AHL20(2)       --------->ZAT2   <---------LBD16    <-------MYC3 ====================================================================================MADS_MADS    --- ->ANAC46<---------YAB1  --------->ANAC46  --------->AHL20(1)     <---------WRKY18(1) --------->ANAC46   atcattaatttacaattaaacccatacacataaatatataaataaaatattgcaaaacagctgtaacttgactgtttcggaaaatcccacttcacatgct  28295300        <---------ALFIN1     <----------DOF2          <---------AHL20(2) =========================bZIP_DOF      <----------DOF2 ---------CCA1(2)            <---------DAG2          --------->AHL20(2)     <----------DOF2 ---------At4g35610       <-----------GT1     <---------AHL20(2)            <---------DAG2  --------- ------>REM1(1)<----------DOF2   <-----------GT1 <---------YAB1<---------ZAT18        --------->ZAT6   tcatctctcaacaccttctttctgatattcactttatactctctttattttcttattaaatctagtatgctctaaaccctttttgctaactctataaaat  28295400                 <-----------GT1           ------>ZmHOX2a(1)          --------->TOE2(3)                  <---------ATHB12        <------------------------ANAC81       <---------ARR14(2)                  --------->WOX13(1)        <---------AHL20(2)          <---       --------->ARR14(2)                <---------ATHB12      <---------ANAC58   ------>ZmHOX2a(1)      --------->GLK1(1)             --------->HSFB2a(2)        <---------ANAC58  -------------------- >AHL20(2)--------->TOE1(3)         <---------HSFB2a(2)   <----------DOF2   ---------->ID1      <----   cccctcacaaatccttaattcacctcttccccttcgctctcgaatcaatcactctctcttctttagcgtttttattttgtcttcctcgttttcttctacc  28295500                                                                                              ------>ZmHOX2a(2)                                          --------->YAB1                                    ---------                            <---------HSFB2a(2)                             ----------->GT1 <--------         <-----------GT1    <---------HSFC1(1)                    <---------AHL20(2)        <-------- -------DOF2                --------->HSFC1(1)         <---------ANAC58  <-----------RAV1(1)<-------- ->WRI1<-----------GT1      --------->HSFB2a(2)        <---------ANAC46  <---------REM1(1) <---------CCA1(2) -----DAG2    <----------DOF2         --------->ZAT6   <---------ANAC58  <---------bZIP60(2)---------   tttttatattttctctcttttcagttttctctagaaaaaaacactagtaatcagtttgcgtttgataaatatttgatgtggcaaaactcttgtggatctt  28295600                                             ----------->GT1                                           ------>ZmHOX2a(2)                                          <------ZmHOX2a(2)                                         --------->AGP1                                         <---------ARR11(3)                                         --------->ARR11(3)                                         <---------ARR14(2)                                     =============HOX2a_HOX2a                                     ------>ZmHOX2a(1)                                --------->GLK1(1)                                <---------GLK1(1) <-----------GT1                           ----------->GT1--------->CCA1(2)                     <---------MYB52(1)  <---------AGP1 >ARR14(2)          --------->LBD16 --------->TOE1(3) -AGP1<---------ATHB12 <---------MYB46(3)--------->ARR14(2)                   --------->PCF2 -ARR14(2)        <---------LBD16   --------->TOE2(3)                   --------->ANAC46 -ARR11(3) --------->YAB1<---------YAB1 <---------CCA1(2)      <---------CCA1(2)             <------- >ARR11(3)<-------TEIL --------->ATHB12----------->ARR10     --------->O2    <------ZmHOX2a(1)   gatgttcaaacattcatgtctccggtgattagtgaaatccttagatctggtttaactatagactcgtctcttagacgcaggacccatcttgttcaatctt  28295700                                                                                         <---------AHL20(1)                                                                                         --------->AHL20(1)                                                                                         --------->ARR11(3)                                                                                         <---------ARR11(3)                                                                                         <---------AHL20(2)                                                                    --------->ARR11(3)   --------->AHL20(2)                                                                  <---------AHL20(2)  --------->YAB1                                                                 --------->AHL20(2)   <---------AHL20(2)                                                              <---------ICU4       --------->YAB1                                                         <----------DOF2          <---------YAB1                                                  <---------MYB52(1)<---------AHL20(1)--------->AHL20(2)                                          <---------At4g35610 --------->YAB1    --------->TOE1(3)        <----------DOF2                   --------->At4g35610<---------YAB1     --------->TOE2(3)   <---------MYB52(1)                     --------->ZAT2 <---------DAG2      --------->YAB1 --ATHB12                        --------->YAB1  <----------DOF2<---------YAB1  --------->YAB1<------   tctccgtcgtctttctctactggttctatgttttctcataaatcagctctcctttagccctttattattatatattctataaccataataatatattaaa  28295800                                                          <---------AHL20(2)                                                        <---------ANAC55(2)                                                   --------------->AtSPL8                 <---------AHL20(2)                                                 --------->YAB1                           --------->AHL20(2)                                                 <---------ICU4                        --------->YAB1                   --------->ANAC55(2)          <---------ATHB12                  <---------YAB1         --------->YAB1      <----------DOF2    <---------YAB1              --------->AHL20(2) ---AHL20(2)     <-----------GT1      ------>ZmHOX2a(1) --------->ANAC55(2) <---------AHL20(2)   actatatactataatctttttacataataaactttgggtcctgcgtcttaatcatagtacttaattttctctgtgtgttttaatatgaataataaaactg  28295900  Previous    Next  AGI:  At1g75388.1    Description:  CPuORF5 (Conserved peptide upstream open reading frame 5). similar to CPuORF1 (Conserved peptide upstream open reading frame 1) [Arabidopsis thaliana] (TAIR:AT2G18162.1) Range:  from: 28295359    to: 28296669    Orientation: Forward Links:  TAIR  MIPS    AGI:  At1g75390.1    Description:  ATBZIP44 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 44); DNA binding / protein heterodimerization/ transcription factor. similar to GBF6 (ARABIDOPSIS THALIANA BASIC LEUCINE-ZIPPER 11), DNA binding / protein heterodimerization/ transcription factor [Arabidopsis thaliana] (TAIR:AT4G34590.1); similar to bZIP transcription factor bZIP124 [Glycine max] (GB:ABI34666.1); contains InterPro domain Basic-leucine zipper (bZIP) transcription factor; (InterPro:IPR004827); contains InterPro domain Basic leucine zipper; (InterPro:IPR011700) Range:  from: 28295359    to: 28296669    Orientation: Forward Links:  TAIR  MIPS      Please cite the corresponding publications when using AthaMap.
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